Danio rerio (zebrafish): 557170
Help
Entry
557170 CDS
T01004
Symbol
sgca
Name
(RefSeq) alpha-sarcoglycan
KO
K12565
alpha-sarcoglycan
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
557170 (sgca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
Motif
Other DBs
NCBI-GeneID:
557170
NCBI-ProteinID:
XP_685270
ZFIN:
ZDB-GENE-041111-121
Ensembl:
ENSDARG00000074156
UniProt:
F8W4K0
LinkDB
All DBs
Position
12:3078160..3092539
Genome browser
AA seq
377 aa
AA seq
DB search
MADKRSWALAITVCVAGFLWVQADSITETPAGQMFVYELHREIFQSEFEPLHKLFGHIYN
DPMVFKCNKERFPDLPRWLRFTQRDPYENGFLYGTPLPQDQGKNIIEIFVTNKRSYDTFR
ERLVINVGPPVKQFPYQAEFFIELREIEKVLPAVVQEEIKLDIQHLWGTGNLEFVNITSA
LDRGGRVPLPLPGYFEGVYVKLGSDRPFSKCMQRLQTTAHQRECESGGKLTGDCSTCTNP
ANCISWCRSELFDLSKPVPPAPVPKVGSGVLEWGGEFSPPESPPDRDFFPDYIVTVIVPF
ALALILCVLLAYIMCCRREGVVKRNAKTTDLQLYHHHTIQGNANELRRMAGNDRQNVDRP
RQCLQPLLMAEQPMAGR
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaaaggagctgggctttagcaataacagtctgtgtggctggttttctgtgg
gttcaggccgacagcatcacagagactcccgccggtcagatgtttgtctatgagcttcac
agagaaatcttccagagtgaatttgagccgcttcataaactctttggtcatatttataat
gaccccatggtgtttaaatgcaacaaggagcgatttccagacctgccccggtggctccgc
ttcacccagagagacccctatgaaaacggattcctgtacgggacgccactgccacaagac
cagggcaagaacatcatagagatatttgtgaccaacaaacggagttatgacacgttcaga
gagaggctggtgataaacgtgggtcctccagtgaagcagttcccgtatcaggctgagttc
ttcattgagctgcgagagattgagaaagttctgcctgctgtggttcaagaggagattaaa
ctcgacattcagcatctgtggggaaccggaaacctggagttcgtgaacatcacctctgct
ctggacaggggtggtcgcgtcccccttccccttcccggatattttgagggcgtatatgtg
aaactgggttccgatcggcccttctctaagtgcatgcagagactgcagacgacggcgcat
cagagagagtgtgaatctggagggaaactcactggagactgcagcacctgcacaaaccct
gccaactgcatcagctggtgcagatctgagctgtttgatctgtccaagcctgttcctcca
gcaccggtccctaaggtgggttcaggtgtgctggagtggggtggagagttcagtcctccc
gaatctcctcctgacagagatttcttcccggactacatcgtcactgtcatcgttcccttc
gctctggctctgatcctctgtgtcctcctggcctacatcatgtgttgcaggagagaggga
gttgtgaagcgaaacgccaagaccactgatctccagttgtatcatcaccacactatccag
ggtaacgccaatgagctgcggaggatggccggcaacgacagacagaatgtggatcgccct
cggcagtgtttacagcctctcctgatggcagagcagcccatggcgggacgctga
DBGET
integrated database retrieval system