Danio rerio (zebrafish): 557221
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Entry
557221 CDS
T01004
Symbol
frem1b
Name
(RefSeq) FRAS1-related extracellular matrix protein 1b precursor
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
557221 (frem1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
dre04091
]
557221 (frem1b)
Lectins [BR:
dre04091
]
C-Type lectins
Lecticans
557221 (frem1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Lectin_C
Motif
Other DBs
NCBI-GeneID:
557221
NCBI-ProteinID:
NP_001131130
ZFIN:
ZDB-GENE-050208-783
Ensembl:
ENSDARG00000062402
UniProt:
B6IDE5
LinkDB
All DBs
Position
22:17117731..17191562
Genome browser
AA seq
2167 aa
AA seq
DB search
MGVFFLALTVLTSSHLWSHVQASSLVQLNRVIRVARGQSVFITANELQFHMDHKSEACKV
EVVLNEPITQRVGKLTPQVFDCQFFPDEVKYVHNGSPLLEEDTVMLRVYRFTDTETFVES
MLLKVRVFEPQRSLVELGNVPLVVPEFYGLSNAINASVLTFKTQPDVICTLRLLSSEISV
PALGQLVVEESGTMVDTEAGPRKVFFCQFFFGRHTAIACPGNKACDLKTRQVEFLKTDCS
EFLSSGLKYQHLSPPSPEIDYIPVRLEFRDQTSRALLETESVWLPVLIQGAMQNQPPHAA
FMSTFILEVDQFILTPLSTAALDAKDDETPQDQLIFSVTKPPAEGYITHLDDHTKMASSF
SWQDLNEMKIAYQPPNSSHTARRNYEVEFQAIDGSFAPSLPILMHISIRTAETNAPRVSW
NMGLDLLEGQSRPITWEHLQIVDKDNIDAVTLIAMDGPLNGHLSVRGGKGFMFKVKDLRE
GVVVYHHSDSDTTRDYVVFRITDGRHSIRHKFPIYILPKDDTPPFLINNVAFEVQEGGTV
RVEEYMLMASDLDSSDDYIQYQLITFPRAGQLIKKSSPHEPGLPVKSFLQRDLFQGLIYY
KHSGEEVFEDSFDFILSDVHQPPNLSDRHTVVIHVFPVKDQLPVEVSGTVRSITVKETEV
VYITQSLLHFRDTEHPDTDLMYVITHPCFSPGNTRLSDAGRLFYTDSTNAMKKDAMVPVL
KSFTQHFINVQYHFAASSVSSLFCCPQHAVNHHKVAYMPPIEDIGPEPLFVQFVFSVSDH
QGGALTGLTFNITVTPVDNQAPEMFTNLLRVEEGGGSFLMEEHLLVQDVDSSEDQLRIHM
KTKPQHGRLELQGTAMLEGDSFTLRDLKALRVRYIHDDSETQKDSIGLTITDGINSAHGA
LLIQILPVNDEPPQLGSDLKAKLSCKEGGQVQITVEYLSATDVDSDDTRLTYMLARTPGR
GVIQRNGVTVDKFSQLDVLNGLIFYLHTGGEIGPDPVSDTVTLIVSDGEAGTMDGCCQED
ALPPPVPLHGTLPVYDLNITVMPVNNQVPTITLGGMIVVDEGARACLCGGVLEASDPDSR
PEELMFHLVTPPQYGFLENTLPSPGFEKSNAGLRVVFFSQLHLSSGFINYVQSVHQGVEP
TADFFTISVSDGMQRSAPLHVYIIINPTNDEVPSLLLSNFTVMEGGMKDLSPDILNAVDV
DIPAESLTLTILDPPAHGTLINGIYGLEMNRYKSMNPEVLQQTLAIQSFTLEELQQGMKI
MYMHDDTETLKDAFTIQLTDGGHTVQGTACVRIIPVNDEKPWLLKNAGVEVEALEKRVIS
SVVLEAGDQDTPSDHLLYILNAGPRFGLLQLRVKAGWVDLSPGQNFTQEDVEMNRLWYSH
TTVSGFKGHDRFHFVLTDGENTTPPQSFFISVRTVQKGDIALITKPVTLLEGERVILTTD
ILTAADSGGRPDELIYTVAVPPEHGHLHMVQTPGVPVFSFSQMDVAANRVCYTHDNSRFA
DRDSFSFAISNGVASRSGTVHFTIEHSDRIPPTLSTNKGLELTEGSMKTISTEELKLTDP
DTALENLTYVVTQSPQYGKLLFKGLPLSKPRFTQLDINNMDLAYQHLNGRATIDRFAFQP
TDGTNKGYLEYGQLKSDPAVFTIQIEILDKTPPSIINKGIPSTVENLPDGKHGIYITSKE
LQASDPDSPDDTLEFTITRPPHFGFLENTLTGAFIKGRFTQKDVDQKAVRYVIPVDVEVT
ADSFEFQVTDPAGNTILPEVLELRWSRVDLSASCYRVCETAGTLAVQVLRSGNSKDPAYI
GIQVEEGTAKVGKDFTHSSASLIQFDPGVNVKMWNIYLKDDGLEENHERFDIILKAPKNA
VLGQRNKASVEIVDPRNGRCNPDDLIVEEDENQHTYQIQPHIPEPETPVLEEYTPDPRSG
ILWENYPPRGDVPYRTDFNHYSLTGQHMEQEAFHSPGRRQLRVLEGNRQRAGLSEVDSRN
QERVWRFHGVIPVSQQEAAPRVHSELEITPIWSWPGDSAETPQRDSASDIQQHKSQTSVS
IDCPNGWTHYRRNCYILGPGTASWSSAQHACTLLEGQLTGIHSKNDMKWIWKFAGKQPFW
IGLVGGPEHGWIWTDGKVLSFSRLRKDEEDQTRSVCVLAQSQKMWIPKGCIDGSEHRYVC
SAPAQIS
NT seq
6504 nt
NT seq
+upstream
nt +downstream
nt
atgggggttttcttcctcgctctaacagtgctcacctcgagtcacctgtggtcacatgtc
caagcttcgagtctagtgcagttaaatcgagttattcgagtagccagaggacaatctgtg
ttcatcacagccaacgaacttcagttccacatggatcacaaatccgaggcctgtaaagta
gaagtggtgcttaatgaacccatcacacaaagagtgggaaaactcactccacaggttttc
gactgccagttctttccagatgaggtgaagtatgtccacaatggcagtccacttcttgag
gaagacaccgtcatgttgagagtctacaggtttacagacaccgagacttttgttgagtct
atgttgctgaaggtacgtgtgtttgagcctcagagaagccttgtagagcttggaaatgtc
cctctggtggttcctgagttctatggcctttccaatgccatcaacgccagcgttctcacc
tttaaaacccagccagatgtgatctgcacgcttcgtcttctcagctctgagatcagtgtt
ccagcactgggtcagctggtggttgaggagtctggaacaatggtggacactgaggctgga
ccaagaaaagtgtttttttgtcagtttttttttggacgtcacactgcaatcgcctgccct
ggaaataaagcctgtgacctcaagacaaggcaagtggagttcctgaagaccgactgcagt
gaattcctctcttcaggtctgaagtaccagcatctcagtcctccttcacctgagattgac
tacatcccagtccggctggagtttcgagaccagacctcccgagccctgctagagaccgag
agtgtctggttaccggtattgatccagggggcgatgcagaaccagccgcctcacgctgcc
ttcatgtccaccttcatcctggaggtagatcagttcatcctgacgcctctgagcaccgct
gcgctggatgccaaagacgacgagacaccgcaggaccagctcattttcagtgtcaccaaa
cctccagccgaaggatatataactcatttagatgatcacactaaaatggcctcctccttc
tcatggcaagacctgaatgagatgaaaatcgcataccagcccccaaacagcagtcataca
gccaggaggaactatgaggttgaatttcaggccattgatggctcatttgccccgagtctt
cctatcctgatgcacatctccatacgcactgcagagacaaacgcacctcgagtctcctgg
aatatgggcttggatctgctggaaggccaatccagaccaatcacatgggagcatctacag
attgtagataaggacaatattgacgccgtcaccttgatcgcaatggacggtccacttaat
ggacacttaagtgttagaggtggaaaaggcttcatgtttaaggtcaaggatctccgagag
ggcgttgtggtctatcatcactcggacagcgacaccaccagggattacgtcgtcttccga
atcacagatggccgccacagcatcagacataaattccccatctacatccttcccaaagac
gacacgccgccttttttaatcaacaacgtggccttcgaggtgcaagaaggtggcacggtt
agggtggaggagtacatgctgatggcctcagatctggactccagcgacgactacattcag
tatcagctgattacttttcccagagctggacagctgattaagaagtcttctccacatgaa
ccaggtctcccagtcaagagtttcctgcagagggaccttttccaagggctaatctactac
aagcactcgggagaggaagtgtttgaggactcgtttgatttcatcctctcagatgtccat
cagcctccaaacctgtcggacagacatactgtggtgatccacgtgtttccagtgaaggac
cagctgcctgtggaagtttctggaacggttcgctccatcacggttaaggaaacggaagtt
gtttacatcactcagagccttctgcacttcagagatacagagcacccggatactgacctc
atgtatgtgatcacccacccctgcttcagtccaggaaacaccaggttatcagatgctggc
aggctgttttatactgacagcacaaatgcaatgaaaaaagatgctatggttccagtgctg
aagtcctttacccagcactttattaatgtacaatatcattttgctgcctcttctgtaagt
tctcttttttgttgtccgcagcatgcagtgaaccaccacaaagtggcatacatgcctcca
atagaggatattgggcctgagcctctgtttgtgcagtttgtgttttctgtgagtgaccat
cagggcggcgctcttacaggactcaccttcaacatcacagtcacgcctgttgacaaccag
gccccagaaatgtttactaacttgctgagggttgaggaaggtggtggtagcttcctgatg
gaggagcatcttttggttcaggatgtggacagctcggaagatcagctcaggatacacatg
aagaccaaaccccaacatggacggctggagctgcagggaacggccatgctagaaggagac
agcttcactctgcgggacctcaaagcattgagggtcagatacattcatgatgactctgag
acccaaaaggatagcattggacttacaatcacagacggaatcaactcagcacatggagca
cttttaattcagatcctgcctgtgaatgatgaaccgccacagttgggctctgatttgaag
gcaaagctgtcctgcaaagaggggggtcaggttcagattacggtcgagtacctctctgct
acagatgttgacagcgatgacactcggctaacatacatgcttgccagaacacctgggcgt
ggggtcatacagcgaaacggggtcactgtggacaagttctcccagctggatgtgctcaat
ggactcatcttctacctgcacacaggtggtgagattggaccggatcctgtctcggacact
gtcaccctcattgtgtcagatggagaggctggaacaatggacggctgctgccaggaggac
gctctcccccctcccgtccccctgcatggcacgcttccggtctatgacctgaacatcact
gtgatgcctgtcaacaaccaggtcccaaccattacgctgggcggcatgattgtggtagat
gaaggtgccagagcatgtctgtgtgggggggtgttggaggccagcgatcctgatagtcgt
ccagaagaactcatgtttcacttggtcaccccgcctcagtatgggttcctggagaacacc
cttccatcccctggcttcgagaaaagcaatgctggactgagagtggtttttttcagccag
ctccacctcagttcgggtttcatcaactatgtccagtcggtgcaccagggtgtggagcct
acagcagacttctttaccatcagtgtcagtgacggaatgcaaagatctgcaccattgcac
gtctacatcatcatcaaccccaccaatgatgaggttccatcactgctgcttagcaacttc
acagtcatggagggaggaatgaaggatctcagccctgatattctaaacgcagtggacgtt
gatatcccagcagaaagtctcaccctgaccatcttggatcccccagctcatggcactctg
atcaatggcatatatggtcttgagatgaatcgttacaaaagcatgaacccagaggttctc
caacaaaccttagcaatccagtccttcaccttggaggagctacagcaaggaatgaagatc
atgtatatgcacgatgacacagaaaccctcaaggacgctttcaccatacagttgacagat
ggtgggcacacagtccaggggactgcgtgtgtccgcatcataccagtcaatgatgaaaag
ccatggctactaaaaaatgcaggcgttgaggtcgaggccctggagaagagggtaatctcc
agtgtagtgctggaagcaggggatcaggacactcccagtgaccatcttctctacatcctc
aacgcaggtccaagatttggccttcttcagctcagggttaaggctgggtgggttgatctg
agcccaggtcagaatttcacccaggaggatgtggagatgaatcgcctgtggtactctcac
actacagttagtggcttcaaaggtcacgacaggtttcactttgtcctcaccgatggggaa
aacacaacacctccacagagtttcttcatctcggtccgcacagttcagaagggcgacatt
gctctcatcactaagcctgtgaccttgctggagggagagagagtcattctgaccactgac
attctgacggccgcagacagtggaggccggccagatgagctcatatacactgtagcagtg
ccacctgaacatggtcacctgcacatggtccaaacgccaggagtaccagtgttctccttc
tcccaaatggatgtggctgccaaccgggtatgctacactcatgacaacagccgttttgct
gaccgtgattctttcagctttgccattagtaacggtgtagcttccagaagtggtacagtt
catttcaccattgaacacagtgaccggatcccaccaaccctgagcaccaacaaaggcctt
gagctcacagagggctctatgaagaccatctccacggaagagctaaaactgactgatcca
gatacagctctagagaatctcacctatgtagttactcaaagcccacagtatggaaagctg
ctctttaaaggattgcctctctccaagcctcgtttcacacaactggacatcaacaatatg
gatctagcttaccaacatctgaatggacgagccacgatcgacaggttcgcctttcagccc
actgatggaacgaacaagggctatttggagtacggacagctaaagagtgacccggctgtt
tttacaatacagatagagatactggacaagacgccacccagtattataaacaaaggcatc
ccaagtactgtggagaaccttccggatggcaaacatggcatctatatcacttccaaagag
ctgcaggcctcagatccagacagtcccgacgacacactcgagttcaccatcactagacct
ccacacttcggcttcctcgaaaacaccctcacaggcgcgtttatcaaaggacgcttcact
cagaaggatgtggaccagaaggctgtgcgctatgtcattcctgtggatgtggaagtgacg
gcggacagctttgaatttcaagtcacagacccagcaggaaacacaatactgcctgaagtg
ctggagctgcgctggtctcgtgtggatctgtcagcttcctgttaccgtgtgtgtgagact
gcaggaactctggctgtgcaggttctgcgctccggaaacagcaaagatccggcttacatc
ggcatacaggtggaagaaggaacagccaaagtcgggaaagacttcactcacagctcggcc
agtctgatacagttcgatccaggtgtgaatgtcaaaatgtggaacatttacctgaaagat
gatggactggaagagaaccatgagagatttgacatcattctgaaggctccaaaaaatgct
gttttgggacagaggaacaaggcctctgttgagattgtggatcctagaaatggcaggtgt
aatccagatgaccttattgtggaggaagatgagaatcaacatacttaccaaatccagcca
cacatcccagagccagaaacacccgtgcttgaggagtacactccggacccaagaagcggg
atcctctgggagaactatcctccaagaggagacgtcccgtatcgcactgattttaaccat
tacagccttacaggtcaacatatggagcaggaggcctttcacagtccaggccggagacaa
ctgagggtcctggaaggaaacagacagagagctggtctgtcagaggtggacagcagaaat
caggaaagggtttggagatttcacggtgtgatcccggtgagccagcaggaagcggctcct
cgtgttcactctgaactggagatcactcccatctggagctggcctggagattcagcagaa
acccctcagcgtgactccgcctctgacattcaacaacacaaatctcagacatctgttagc
atcgattgtccaaatggttggactcactaccggaggaactgctatattttggggcctggt
accgctagctggagtagcgcacaacatgcctgcacactgcttgaaggccaattgacaggt
atccactcaaagaatgatatgaagtggatctggaagtttgctgggaagcagccattttgg
attggactggtaggtggtccggagcacggatggatatggacggatgggaaagtgctgtcg
ttctccagactcaggaaagatgaagaggatcaaactcgctctgtttgtgttttagctcag
agccagaagatgtggattcctaaaggttgcattgatggatccgaacacagatacgtttgt
tcagcacctgcacaaatcagctaa
DBGET
integrated database retrieval system
