Danio rerio (zebrafish): 557701
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Entry
557701 CDS
T01004
Symbol
shank3a
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X14
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
dre
Danio rerio (zebrafish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
SH3_2
Ank_3
Ank_5
SH3_9
PDZ_6
PDZ
SH3_1
2C_adapt
Motif
Other DBs
NCBI-GeneID:
557701
NCBI-ProteinID:
XP_021330058
ZFIN:
ZDB-GENE-060503-369
UniProt:
A0A8M9PSQ4
LinkDB
All DBs
Position
18:complement(8834872..9404040)
Genome browser
AA seq
1737 aa
AA seq
DB search
MVVCVGVESGRCDDLKHIRVDEDAGDQLTPHMANLKKFMEYVQQRNVEKVSKFLEKGLDP
NYHDPDTGECPLTMASQLEGCAELIKVLKNGGAHLDFRTRDGITALHKAVRTKNHTALIT
LLDLGASPDYKDSRGLTPLYHSSMVGGDPYCCELLLHDHAQVGCMDENGWQEIHQACRHG
HVQHLEHLLFYGADMSAQNASGNTALHVCALYNQDSCARVLLFRGANKEIKNYNSQTAFQ
VAIIAGNFDLAEIIKTHKASDVVPFRETPSYTNRRRVTGGDTLTSSRSLPRSASDNNLNN
VADASHAHSPVPSLRSLPPLAHSGIDPAADGSLQSTGSSLSSHSRSPSLQRVTEEASVLA
GRRHMPLMHSHSRGRLSPGTVQRDPSPPPVGPSHTLSGARGPKRKLYSAVPGRTFIVVKP
YSPQGEGEIQLNRGERVKVLSIGEGGFWEGTVKGRTGWFPADCVEEVQMRQYDPRLETRE
DRNKRLFRHYTVGSYDNFTSYSDYIIEEKNAMLQKKENEGFGFVLRGAKAETPIEEFTPT
PAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQVVSLIRQGGNSLLMKV
ASVTRKPESEETVRKKAPPPPKRAPSTTLTLRSKSMTAELEELASARRRRGERLDEILAS
QETVLRPKVEADYRAATVKQRPTSRRITPAEISSLFERQGLALHGALHPALEKAHMQLPK
SMARTKSFGATEEDRLSALAAEHRFPRSSSMTDSLRDSHSIPPPPQMAPPPPPSLYYLDT
GPPPSFCPPPPPGRLHDPSRSSFKPGSEPRLHALPQTMSAELYEPPRHASHMERQKKARS
MIILQDSSHLPVEPTDIPRPGPVSTPPERIKRKGRIIDNPYANVGQFSVGMFTPTPSKPQ
RRKSPLVKQLQVEDAQERASLALASIHAREHSPSGRLAAQHTSRSDFFHQQQQLLHERSQ
AHAEGLLQGKGPFAAAIADAVKDRERRLEERRKSTVFLSVGTMEGSSAPPPEAPSLTPSR
SVDERMLTRELGQLPPPALALRPSPGGTTFIHPLTGKPLDPNSPLALALAARERALTSQS
QSPSSSPEPRTKHETAGGVLYMETQTKEAERSEGEGGFASPPFSPATKRIYETSVPTSKI
QWGSPISTRKELETRTERKEERKIEDKKSMIISIMDTSQQKTAGLIMVHATSNGQAVGPS
PERSVPSPKGILSESPKPMLAEIKRAKSPGPEAPSISTPPPTAAPTSQPPPSPSSDKTLA
QGSSEEDAEPYTVTLPPAMLSSSDEETREELRKIGVVPPPDEFSNGLLAKTPETAVPPAP
TLTQTTPSTLPSAPPAPPPPAPSAAVAAAAQVPASSGLQAASGKPSESHLGPESAADSGV
EEVDTRSSSDHHLETTSTISTVSSMSTLSSESGEPTDTYTTHADGQTFILDKPPVPPKPK
LKSQLSKGPVTFRDPLLKQSSDSELLSQQHAAALAAAAGASGPARPRYLFQRRSKLWGDT
VEPRPLSGAEEGKPTVISELSSRLQQLNKDTRSLGEEPLGASLDPGRKSPVVGPRLFSSL
GELHTISQRGYGTTYTIRPGSRYPVTRRTPSPGSPDRSDPLGPIRGFGLATSPITPPTIL
KSSSLSLPHEPKEVRFVMRSSSARSRSPSPAPSPGMTSPLLTLRPFHQKPLHLWNKYDVG
DWLASINLAEHRDRFQEHEIEGSHLPALTKEDYAELGVTRVGHRMNIERALKQLLES
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggtagtgtgtgtcggggtggaatcagggcggtgtgatgacttgaagcacatcagagta
gatgaagacgcaggagatcagctaacgccacacatggctaacttgaagaagtttatggaa
tatgttcagcagaggaacgttgagaaggtatcaaagtttctggagaaagggctcgaccca
aactaccacgacccagacaccggagaatgtcctctgacaatggcgtcgcagctggaaggt
tgtgcagagcttataaaggtcctgaagaatggaggagctcacctggatttcaggaccaga
gatggcattaccgcccttcacaaagcagtccgcaccaagaaccacacggcacttattacg
ctgctggatctgggagcctctccggattacaaggacagtcgaggcctcactcctctgtat
cacagctctatggtggggggcgacccatactgctgcgagctcctgctgcacgatcacgct
caggtgggctgcatggatgagaacggctggcaggagattcaccaggcttgccgtcatgga
catgtgcagcatctggaacacctgctgttttacggagcggacatgagcgctcagaatgct
tctggaaacactgccctgcacgtgtgtgctctctacaaccaggatagctgcgcgagagtg
ttgctgttcagaggggcgaataaggagattaagaactacaacagccaaactgccttccag
gtggctattatagctggaaactttgacctggcagaaattataaagactcacaaagcatca
gatgttgtgcctttcagggaaacgccttcctacacaaatcgccggcgcgtgactggaggc
gacactctgacatcctcacgctcgctgcctcgctccgcctccgacaataacctgaacaat
gtggcagacgctagccacgcccactcccctgtgccgtctctgaggagcctgccccctctg
gcccactccgggatcgaccctgcggctgacggcagtctacagagcacgggcagctcgttg
tcctcacactcccgctcaccgtccctccagcgcgtcactgaggaggccagcgtgcttgca
ggacgccgacacatgcccctcatgcactcacacagccgcggacgcctcagcccggggacg
gtccagcgggaccccagccctcctcccgtggggccctcgcacacactctcaggagcccgg
ggccccaaaaggaaactctacagcgcggtgccggggcgcacattcatcgtggtcaaacca
tactcaccgcagggagagggagagatccagctgaaccgcggagagagggtcaaagtgtta
agtataggagaagggggattctgggaagggacggtaaaaggaagaaccggttggtttcct
gcagactgcgtggaggaagtacagatgagacagtatgatcctcgacttgagacgagagag
gatcgaaacaagaggctgttcagacattacactgtgggctcctacgacaactttacctca
tatagtgattacatcatcgaggagaagaacgctatgctccagaagaaggagaatgaggga
ttcggctttgtcttgcgaggagcaaaagcggagacacccattgaagagtttacacccaca
cctgcctttcctgcactgcagtaccttgagtctgtggatgtcgagggcgtggcctggagg
gcggggcttagaactggagacttcctcattgaggtgaatggtgtaaatgtggtaaaagtg
ggacacaagcaggtggtgtcactcatccggcagggcgggaacagcctcctgatgaaggtg
gcatcagtcacacgcaagccagagtctgaggagacagtcaggaaaaaagcgcccccgcct
cctaaaagagcacccagcaccaccctcaccctgaggtccaaaagcatgaccgctgagctc
gaagaactggcctctgcaaggaggaggagaggagaaaggttagatgagattttggcctct
caggagacagtactgaggccaaaggtggaagcagactatagagccgccacggtgaagcaa
cgtcctaccagtcgccgaattacaccagcagaaatcagttctctttttgagcgacaagga
cttgcccttcatggtgctcttcacccagcgttggaaaaagcccacatgcagctgccgaaa
agcatggctcgaacaaagtcttttggagccaccgaagaggatcgactgtctgccctggca
gcggagcacagatttccacgaagctcctccatgacggacagcctgagagacagccatagt
atccctccacctcctcagatggctcccccacctcctccatcgctttactatctagatact
ggaccccctccttcattctgcccaccccctccccctggccgccttcacgaccccagccgt
tccagttttaaaccaggctctgagccgagactacatgcattgcctcagacaatgtctgct
gagctgtatgagccgcctcgccatgcctcccacatggagaggcagaagaaagcccgctcc
atgatcatcctgcaggattcctcccacctccctgtggagcctactgacatccccaggcca
ggtcctgtctcaactccgcctgagagaatcaagcggaaaggcagaatcatagataacccc
tacgccaatgtgggtcagttcagcgtgggtatgttcacgccaactcccagcaagccacaa
cggaggaagagcccacttgttaagcaactgcaggtggaagatgctcaggaaagagcctca
ctagcattggcatccatccatgcgagggagcactctccttctgggcgccttgctgcccag
cacaccagcaggtctgacttctttcatcagcagcagcagctgttgcatgaacgcagtcaa
gctcatgctgaaggactgttgcaaggaaaaggaccttttgctgctgccattgctgatgct
gtgaaggacagagaacgtcgtctggaggagaggcggaaatctacagtcttcctatcagtg
ggaactatggagggcagttcagcaccaccccccgaggccccctcgctcacaccatcccgt
tctgttgatgaacgaatgctcactcgtgaactcggtcaattgcctcctcccgccttggcg
ttacgtccctcacctgggggcaccaccttcattcacccactgacaggtaagcccctggac
cccaactctccattggcacttgcgctggccgcaagagaacgggcattaacttcccagagt
cagtccccctcaagcagccctgagcccagaactaaacatgaaactgctggaggggtactg
tatatggagacccagaccaaagaggctgagcggtcagagggtgagggtgggtttgcttca
cctcccttttctcctgcaacaaaaagaatttacgagacctccgtccccactagcaagatt
cagtggggaagtcccatatctaccaggaaagagttagaaacaaggacagaaaggaaggag
gagaggaaaattgaggacaaaaagagtatgatcatcagcatcatggacacgtctcagcag
aaaactgctgggcttatcatggttcatgcaacgagtaatgggcaggctgtagggcccagt
ccagagcgcagtgtcccttcccctaaggggatattgtcagaaagccccaaacccatgttg
gccgaaattaaacgtgcaaagtcccctggtcccgaagctccttcgatatccaccccacca
cccaccgcagctccaacttcccagccccctcccagcccatcctcagacaaaaccttggct
cagggtagttctgaggaggatgccgaaccctatacagtcaccttgccacctgccatgcta
tcctccagtgacgaggagacaagagaggagcttcgtaaaatcggtgtggttcctccgccg
gacgaattttcaaatggccttcttgctaagactcctgaaactgcagtacctcctgctccc
acgttgacgcagacaactccttctaccttgccctcagctccacccgctccaccaccccct
gctccttcagcagcggtcgctgcagcagcacaggtccctgctagcagtggcctgcaagca
gcctcagggaagccatctgagtcccacctgggcccagagtctgctgctgactccggggtg
gaagaggtagacactcgtagctccagcgatcaccacctggagaccacgagcaccatctct
actgtctccagcatgtccacactgtcctcggaaagcggcgagccaacagacacttacacc
acccacgcagatggccagacgttcattcttgataagccgccagtgcctccaaagccaaag
ctcaagtcccagctcagcaagggcccggtgacgttcagggaccccctgctcaagcagtca
tctgatagcgaactgctctcacagcagcatgcggctgcactggctgctgctgcgggagcc
tcaggcccggccagaccccgctacctcttccagagacgctctaagttgtggggggacaca
gtagaaccccgtccgctttcgggggcagaggaaggcaagcccactgtgatcagcgagctc
agctcccggctgcagcagctgaacaaggacacacgctcacttggggaagagccacttgga
gcttcacttgaccccggacgaaaatcccccgtggtcggtccaagactcttcagcagtttg
ggagagctccatactatctctcagagaggctacggcaccacctacaccatcagaccaggc
agccgctacccagtaacccgcaggactcccagtcccggatccccggaccgctcagatcct
ctaggacccatccggggtttcggcctggccacgtcaccgatcacaccgcccaccatcctt
aagtcgtccagcctcagtctccctcacgaaccgaaagaagtgcgtttcgtcatgaggagc
tccagtgcacggagtcgctcaccctcgccggccccttcgccaggcatgacctccccgctt
ctcaccctgcggccgttccaccagaaaccccttcatctgtggaacaagtacgacgtggga
gactggctggccagcattaacctggccgaacaccgggatcgtttccaggagcacgagatc
gagggctcccatctgcctgctctgaccaaggaggactacgctgagctgggtgtgacacgt
gtcggtcaccgcatgaacattgagcgcgcccttaaacagctgctggagagttga
DBGET
integrated database retrieval system
