Danio rerio (zebrafish): 557777
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Entry
557777 CDS
T01004
Symbol
ebf1b
Name
(RefSeq) transcription factor COE1-A-like isoform X1
KO
K09103
early B-cell factor
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
557777 (ebf1b)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
557777 (ebf1b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
557777
NCBI-ProteinID:
XP_005161480
ZFIN:
ZDB-GENE-090814-2
Ensembl:
ENSDARG00000069196
UniProt:
A0A8M2B8M6
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All DBs
Position
21:complement(37376965..37658487)
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AA seq
604 aa
AA seq
DB search
MFGIQESIQRCGSILKEEPIGAGMNTVRTWIQGAGVLDANTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTSFVGFVEKEKETTGEKTNNGIHYRLQLLYSNGI
RTEQDFYVRLIDSMTKQPIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVEGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTPSYLEHAAAPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGSML
VWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRL
QKVIPRHPGDPERLPKEVILKRAADLVESLYGMPHNNQEIILKRAADIAEALYNVPRSHN
QLTGLTNSSVHTSMMGGNSFTGQLAVNVSESSQGGNQGFGRNTSSVSPHGYVPSSTPQQS
SYSTVSTSMNGYGNSGMTNLTGSPNFLNGSAANSPYAIVPSSPTMASSTSLPSNCINSSG
IFSFSPANMVSAVKQKSAFAPVIRPQSSPPPTCTSTNGNGVQDQSFVDSNKYSTASALQG
LAFS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggagagcatccaaaggtgtgggagtattttgaaagaagaacccatc
ggagccggcatgaacactgtccgaacatggattcaaggcgccggggtgctggatgcgaac
acggccgcgcagagtggagtgggactggcccgtgcgcacttcgagaaacagccgccctca
aatcttcggaaatccaacttctttcactttgttttagctctttatgatcgacaaggtcag
ccggtggaaatagagagaacctcctttgtcggatttgttgaaaaagagaaggagactaca
ggagaaaagacaaataatgggatacattacagactgcaacttctctacagcaacggcatc
agaacagaacaggatttttatgtaagactaattgactccatgactaaacagcccatcatc
tacgaaggtcaagacaagaacccagagatgtgccgtgtactcctgactcatgaaatcatg
tgcagtcgatgctgcgacaaaaagagttgtggaaaccgcaatgagacaccctctgatcca
gtcatcattgacaggtttttcctcaagtttttcctgaaatgcaatcagaactgtctgaag
aatgcaggaaatccacgagacatgcgccgctttcaggtggttgtgtcaacgacagtgagt
gtagaaggacacgttttggctgtttcagacaacatgtttgtgcacaacaactccaaacat
ggcagacgagctcgacgactggacccatcagaaggaacgccatcatatttggagcatgca
gctgcaccttgtatcaaagccattagtcccagtgaaggctggacaacaggaggtgctact
gtcatcatcattggagacaacttctttgatggattgcaagtcatctttggaagcatgttg
gtctggagcgagctcatcacacctcatgcaatcagagttcagacccctcctcgccacatt
cctggggtggtagaggtcacactctcctataagtccaaacagttttgcaagggcacacca
ggaagattcatctacacagccctgaatgagcccaccatagactatggttttcagcggtta
cagaaagtgatacctcgacatccgggagaccctgaacgcttgccaaaggaggtgattttg
aaaagagcagcagatctggtggaatcgctttatgggatgcctcataataaccaggaaatc
attcttaaaagagcggcagacattgctgaggccctgtataatgtgccacgaagccacaac
cagctcactggtctcactaacagctctgtccatacaagcatgatgggaggtaattccttt
actgggcagcttgccgtgaatgtctcagaatcatctcaaggtggaaaccagggtttcggt
cgtaacacaagtagtgtatcaccacatggctatgtacccagttccacccctcagcagagc
agttacagtacagtatctactagcatgaatggctatggtaacagtggcatgaccaacctg
actggctccccaaacttcttgaatggctctgctgccaattcaccctacgcaattgtcccc
tccagccccaccatggcttcctccaccagcctaccctcaaactgcatcaactcctctgga
atcttctccttctctccggcaaacatggtttcagctgtgaaacaaaagagtgcttttgct
cctgtcattcgaccacaatcttcacctccacctacatgcaccagcaccaatggaaatggt
gttcaagatcagtcttttgttgactctaacaagtactccacagccagtgcactccagggc
ctggccttctcctga
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