Danio rerio (zebrafish): 557875
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Entry
557875 CDS
T01004
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
557875
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
557875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
ERCC3_RAD25_C
CUE
HHH_3
T2SSK
Motif
Other DBs
NCBI-GeneID:
557875
NCBI-ProteinID:
NP_001018610
ZFIN:
ZDB-GENE-050522-499
Ensembl:
ENSDARG00000014041
UniProt:
A0A8M1N6H2
LinkDB
All DBs
Position
8:31718343..31734788
Genome browser
AA seq
972 aa
AA seq
DB search
MSFFNLDRFRFQRDNAVGIHRKSPDGSNSDKENKQAHQRKADGQFPSGKTSRQVLEDVSS
DDEVVRMGKDSASDLQQHINKDMEDKIIKLLEIFPQKSKKDLLEVIENTSTLDGAVAHCL
MIYGDEDSGGRKDKGGRSDDDDQPKKKRKIQRSDSSESEDEDSEDEESEEPSREKQEALL
KKLKRKLPDIEKEVLRDILKEHDWDYENALGSLLVFSSTDTSSPEDQKSKQKSKSSHSKE
KTDKITQRPSGSSSLSRWLTAASSHVPEVSSMSALKTQKSALSKSTSKNSSFKRKRGDEM
PLNDVSASEDEDEIDSDVDSMSDDQDSEDEDSISGTLQDKIIQFLQDASLDELALISGCS
IKKAQKIISLRPFNTWKDVKEQFFKDNGLSIDLVHGCKVVLKERQVVLDLMGRCEKIAQK
MTKDVTQVIEAGMGSIKQPKVLNSNLKLQAYQLIGLKWLILLHQHKLSGILADEMGLGKT
IQAIAFLAHLYEKGIKGPHLITVPSSTLDNWVRELGLWCPSLKVLIYYGSVEDRKYLRQD
ILTGLIDFNIIVSTYNLTIGNDHDRSLFRKLKLKYAVFDEGHMLKNMNSLRYRHLMTINA
EHRLLLTGTPLQNNLLELMSLLNFIMPSMFSSSTSQISKMFSTRSSEEESSFHKDRIAQA
RLIMKPFILRRVKSEVLKELPPKMEKIEMCPMSDAQHKLYDILFKRLKKTPNGDKRELCN
VMMQLRKMANHPLLHRQYYTSDKLAAMSKAMLKEPTHYDADPALIQEDMEVMSDFELHNL
CREYSSISGFQLEKALILDSGKFALLTKTLAKLKEKGDRVVLFSQFTMMLDIVEILLKHL
DHQYVRLDGSTPMAERIGLIDKYNTNPEIFVFLLSTRAGGQGINLASANTVILHDIDCNP
FNDKQAEDRCHRMGQTRTVQVIKLISKDSIEDCMLRVGQEKLKLEQDMTTDEGEDGAITE
QMAELLKVSLGL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttttaacctggaccggttccgtttccaaagggacaacgcggtcggcattcac
cgtaaatcaccggacggctcaaactcggacaaagagaataagcaggctcatcaaagaaag
gcggatggtcagtttccatcaggcaagacatcaagacaagtactagaagatgtttcttca
gatgacgaagttgtcaggatgggcaaggattcagcatcagatttgcagcagcatataaac
aaggacatggaggacaaaatcattaagctgttagagatattcccacagaagagcaagaaa
gatctactagaggtcatcgagaacaccagcaccctggatggagctgtagcacattgtttg
atgatttatggggatgaagattcaggtgggcgcaaagacaaagggggtcgtagtgatgat
gatgatcagccaaagaagaagagaaaaatccagcgttcagattcttctgagtctgaagat
gaagattccgaggatgaggagagcgaggagccaagcagagagaaacaggaggccctgcta
aagaagcttaaaaggaaactgcctgacattgaaaaagaggtcttaagagatatccttaaa
gagcatgactgggactatgagaatgccttggggtcgctgcttgtgttttcatcaacagat
acaagttcaccagaaaatcagaagtcaaaacaaaagtcaaaatcctcgcactctaaggaa
aaaactgacaaaatcacacaaaggcccagcggctcgtctagtctgtctcgatggctgaca
gcagcatcatctcatgtgcctgaagtatcaagcatgtctgctttaaaaacacaaaaatct
gcacttagcaaaagcacaagcaagaactcatcctttaaaaggaagaggggcgatgaaatg
ccactaaatgatgtcagcgcctctgaggatgaagatgagattgacagtgatgttgatagt
atgtctgatgatcaggattcggaggacgaggacagcatctctggcactcttcaggacaag
atcattcagttccttcaagatgcttccctagatgagctcgccctgatatctggctgctcg
atcaaaaaagcccagaagatcatttcactgaggcctttcaacacttggaaagatgtgaaa
gagcagttctttaaagataatggcctgtctatagacctggtacatggctgcaaagtggtg
cttaaggagaggcaggtggttctagacctcatgggaagatgtgagaagattgcacagaag
atgaccaaagatgtcactcaggtcatagaagcgggcatgggctccatcaaacaacccaag
gtcctgaacagcaatttaaaacttcaggcatatcagctgatcggcttaaagtggctgatt
cttcttcaccaacataagctgagcggcatcctggcagatgaaatggggctgggtaaaact
attcaggccatcgctttcttggctcatttgtatgaaaaaggaatcaagggccctcatctt
attaccgtaccctcatccacactggataactgggtacgtgagctggggctttggtgtccc
agtctcaaagttcttatttactatgggtctgtggaagaccgcaaatacttgcgacaagac
atcctcactggcttaattgatttcaacatcattgtatccacgtacaatctcacaatagga
aatgaccatgatcgcagtctcttccgcaagctgaagctgaaatatgcagtgtttgatgag
ggccacatgcttaaaaacatgaactcgctacgctaccgccaccttatgactatcaatgct
gagcacagattactattgaccggaacgcctttacaaaacaacctgttggaactcatgtcc
ttgctgaacttcataatgccatccatgttctccagcagcacctcacagatctccaaaatg
ttctctacgaggtcctcagaagaggaaagcagttttcacaaggacagaatcgctcaggcc
agacttatcatgaagccatttatcttgagacgagtcaagagtgaggtgttgaaagaactt
ccaccaaaaatggaaaagattgaaatgtgtccaatgagtgatgcccagcataagctgtat
gacatacttttcaaaagactcaagaagactccaaatggagacaagagggagctttgcaat
gtgatgatgcagttgagaaagatggctaatcatccgttgctgcaccgccagtactatacc
agtgacaagttggctgccatgagtaaagccatgcttaaggagccaacacattacgatgct
gaccctgcattgatacaggaggacatggaagtgatgtctgattttgagctgcataattta
tgtagggagtacagctcaataagtggatttcaactggagaaagcgctcatcttagattct
gggaagtttgcactgttaaccaagacgcttgccaagctcaaagaaaagggtgacagggtg
gtgctctttagtcagttcaccatgatgctggacattgtggagattctgctcaaacatctt
gatcatcagtatgttcgcctggatggttctactcccatggcggagaggattggtctcatt
gacaaatacaatacaaatcctgagatctttgtgttccttctgtcgactcgggctggaggt
cagggaatcaaccttgcttcagccaacacagtgattctgcatgacattgactgcaatccg
ttcaatgataagcaagcagaggaccgctgccatcgaatggggcagaccagaacagtacag
gtgatcaagctcatcagcaaggactcaattgaagactgcatgcttcgtgtgggacaggaa
aagctaaaactagaacaggacatgactactgatgaaggtgaggatggtgctattactgaa
caaatggctgaactgctcaaagtctcactgggcctttaa
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