Danio rerio (zebrafish): 557907
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Entry
557907 CDS
T01004
Symbol
yme1l1b
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1b
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dre01002
]
557907 (yme1l1b)
Peptidases and inhibitors [BR:
dre01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
557907 (yme1l1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_16
AAA_5
AAA_22
TIP49
RuvB_N
FAD-SLDH
DUF815
Mg_chelatase
AAA_33
AAA_lid_PRS2_C
IstB_IS21
AAA_18
AAA_17
Zeta_toxin
AAA_28
AAA_14
PhoH
AAA_7
nSTAND3
AAA_25
Motif
Other DBs
NCBI-GeneID:
557907
NCBI-ProteinID:
NP_001317997
ZFIN:
ZDB-GENE-070410-25
Ensembl:
ENSDARG00000104401
UniProt:
A0A0R4IJC7
LinkDB
All DBs
Position
2:complement(4044629..4070850)
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AA seq
715 aa
AA seq
DB search
MFSLSTTLQPQVTVQLSHLINALHSLKGSVSSNTSVSHKHRENTPEQDLNSTEPSLSLRD
LGLSDLGLVQIDELLEKLLPRVSQQDSQLKTVPDIWRTSHLSSDSFFHNKHGFSRMGGVT
PVFSRQNQSPLQTLCTDLNYLPLLVQNRGFKTLKSRTRRLQGGFEGPVEPEGITPSFMKG
FLTRDKGPDVETLEKLLKNKNIPEGQHDAFKTGFAEGFLKAQALTQRTQESLRRTRLILL
VLLLVGLYGLSKTPFLSVRFRTTSGLDSAVDPVQMKNVTFEHVKGVEEAKNELQEVVEFL
RNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGAS
RIRNLFREAKGNAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVII
IGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLKKIKVDSAVEAEVIARGT
VGFSGAELENLVNQAALKAAVDGKDMVTMKELEFAKDKILMGPERRSAEIDKRNKEITAY
HESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSMLPENDRWSETRAQLLAQMDVSMGGR
VAEELIFGNENITTGASSDFDSATKIAKMMVTRFGMSEKLGVMTYSDLTKQSPETQAAIE
HEVRILLRDSYERAKALLKSRAKEHRNLAEALLRYETLDAKEIQLVLEGKAINSR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttttctctctccactaccctacagccgcaggtaacagtccagctgagtcacctcatc
aatgctctgcactcgctgaaggggtcagtgagcagcaatacttcagtcagtcacaaacac
agagagaacacgccagaacaagatctgaacagcaccgagccgtcgctgtccctcagagat
ttgggtctgtcagatctcggtctcgtccagatagatgagctgctggagaagcttctgcct
cgtgtttctcagcaggactcgcaactgaagactgtgccagatatctggaggacttctcat
ctctcttctgactctttctttcacaacaaacatgggttttcaagaatgggtggtgtcact
ccggtgttctcaaggcaaaaccagtctcctctccaaactctctgcacagatctcaactat
ttacctttgttggtccaaaatcgaggctttaaaaccctgaagtcccgaacacgacgcctg
cagggaggttttgagggtccagtggagcctgagggaattacaccgtcatttatgaagggt
ttcctcacacgtgataaaggaccagacgttgaaacactggaaaaactccttaaaaacaaa
aatattcccgagggtcaacatgatgcttttaagactggttttgccgagggtttcctcaaa
gctcaggctcttacacagagaacccaagaatcgcttaggaggaccagactcatactgttg
gtgcttctgctggtgggcttgtatggactctccaaaacacctttcttatcagtgcgattc
cgaactacatcaggcctggactctgctgtggacccggtccagatgaagaacgtcaccttt
gagcatgtgaagggtgtggaggaggccaagaacgagctgcaggaggtggtggagttcctg
aggaacccacagaagttcaccgttttaggaggaaagctgcctaaaggaatcttgttggtt
gggcctccgggaacaggaaagaccctgttggcacgtgctgtggcgggtgaggcggatgtg
cctttctactacgcatctggatcagagtttgatgagatgtttgttggagtcggtgccagt
cgaatcagaaaccttttcagagaagctaaaggaaacgctccttgtgttatcttcattgat
gagctggacagtgtcggaggaaagaggatcgagtctcccatgcacccctattctagacag
acaatcaatcagctgcttgcagaaatggacgggttcaagccaaatgaaggcgtcatcata
attggagcaacaaacttccctgaagctttggataatgctctgatccggcccggtcgtttc
gatatgcaggtcactgtacccagaccagatgtgaagggccgcacagaaatcctcaagtgg
taccttaaaaaaattaaagtggactccgctgtggaggcagaggtcattgctcgaggaacg
gttggcttctctggtgccgagctggagaatctggtaaatcaggctgcactcaaggctgct
gtggacggcaaagacatggtgaccatgaaggagctggagtttgctaaagacaagatactg
atggggccagaacgcaggagtgcagagatcgacaagaggaataaagagatcacggcgtac
cacgagtcaggccatgctattattgcgtactacaccaaagacgccatgcccattaataaa
gctactattatgcccagaggcccaactttgggtcatgtgtccatgcttccagagaatgac
cgctggagtgaaacccgtgctcagcttctggctcagatggatgtcagtatgggcggtcga
gttgcagaggagctcatttttggcaatgaaaatatcaccacaggagcatcaagtgacttt
gacagcgctacaaaaatagctaaaatgatggtgaccagatttggcatgagtgaaaagttg
ggtgtgatgacatacagcgacctcaccaagcagagcccagaaactcaggcagccattgaa
catgaagttcggatacttctgagggattcctacgagcgtgctaaagctctcctgaagtcc
cgcgctaaagagcacagaaacctggcggaggctttactgcgctacgagacattggatgcc
aaagagattcagctggtcttggagggaaaggctataaacagcagatga
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