Danio rerio (zebrafish): 557957
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Entry
557957 CDS
T01004
Symbol
strbp
Name
(RefSeq) spermatid perinuclear RNA-binding protein isoform X1
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
557957 (strbp)
Spliceosome [BR:
dre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
557957 (strbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
557957
NCBI-ProteinID:
XP_005155660
ZFIN:
ZDB-GENE-030729-18
Ensembl:
ENSDARG00000021455
UniProt:
A0A8M2B247
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All DBs
Position
10:complement(9831456..10018168)
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AA seq
696 aa
AA seq
DB search
MRSIRSFGNDDRHVMAKHSTIYPSSEDLEAVQSLVSTVECALKHVSDWMDQSQASQSNPT
NASSTQEEETEPTVDESPEGSTNEESSCSSGPSEGGVLCGVMRIGLVAKGLLIKDDMDLE
LVLMCRENPTKTLLSTVCEHLPQQIEKLTEEKYEVQQCIPEAAILVCTTTEPKLTLKVTL
TSPQFKDDCETEEQESVESSEPADLLDRQRCLVALASLRHAKWFQARVNGLKSCVIVLRI
LRHMCNRVPAWEPLKGWPLELICEKAIATCNRPLGAGEALRRVMECLASGILLPGGPGLH
DPCEKEPTNTLSAMTDEEAEAITSNAQHALRLMAFGQIYKVLDMDPLPSSKPSQKYPWSD
KEGLGLKRPYEDGLMDDKDLIKKMKRNLRKAVLDSKAIDSNQPMNALMRLNQIRPGLQYK
LLSQSGPVHAPVFTMSVDVDGTVYEASGSSKKTAKLHVAVKVLQAMGYPTGFDTDLDSMS
ADEKSDGEGKSESSTHSSNNTTHSSDSSNTLEVRTQGPILTASGKNPVMELNEKRRGLKY
ELISESGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAALAALEKLFSGPNAAGNKKKK
IIPQSKGALAAAAAVSAVAVQAARGRGRPTLTRGAFVSAAAAPGYVTPGFGAPYGYSAAA
ATPAYGGLFIDNPFYQPRTIAPFFIHLGPQDLFSDF
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctattcggtcattcggcaatgatgaccgtcacgtcatggccaaacactccacc
atctacccttcctctgaggacctggaggcagtgcagagcctcgtctccacggtcgagtgc
gccctcaaacatgtgtctgattggatggatcaatctcaagccagccaatcgaatccaaca
aatgcatcaagcacacaggaggaggagacagagcccaccgtggacgaatcgccagaaggc
agcacaaatgaggaaagcagctgtagcagtggtcccagtgaaggaggagtgctgtgtgga
gtcatgaggatcggtctggtggccaaaggccttctgattaaagatgacatggacctggag
ctggtgctcatgtgccgagagaatcccaccaagactttgctgagcaccgtctgtgagcac
ctcccacagcagattgagaagctgacggaggagaagtatgaggtacagcagtgtattcct
gaggccgccatcttagtctgcaccacaacagaacccaagctcacgctgaaggtgacgctc
acctctccgcagtttaaagacgactgtgagaccgaggagcaagagagcgttgagtcgagc
gagccggcggacctgttggatagacagaggtgcctggtggcgttggcctctctgcgacat
gccaaatggttccaggctagagttaatggcctaaagtcatgcgtgatcgtcttgcggata
ctgaggcacatgtgcaatagagtcccggcgtgggagcctcttaaaggatggcctttggag
ttaatatgcgaaaaggccattgccacatgtaacagacctctgggtgcaggagaggctctg
cgtcgggtcatggagtgtctggcctctgggatactgcttccaggtggaccaggattgcat
gatccctgtgagaaggagccaacgaacaccctgtcggccatgacggatgaggaggcagag
gctattacatccaatgcacagcatgctttgcggctcatggcttttggacagatctataag
gtcttggatatggaccctcttccctcaagtaaaccttcacagaaatacccctggtcagat
aaggaaggtctagggctgaagagaccttatgaagatggtctgatggatgacaaagacctc
atcaaaaagatgaaacgcaacctgagaaaagcagttcttgacagtaaagcaatagactcc
aatcagcctatgaacgctctgatgcgcttgaaccagatccggccggggctgcagtacaaa
ctgctgtctcagtcaggtccggttcacgcccccgtcttcaccatgtccgtagacgtcgac
ggcactgtttacgaagcctcgggatcctccaagaagaccgccaagttgcacgtggcagta
aaggtgctgcaggcgatgggttaccctactggcttcgacacagacctggactccatgagt
gcagatgagaagtcagatggcgagggaaagagtgaatcctccacacactcaagcaataac
acaacacactcctcagacagctccaacacattggaggtacgaactcagggtcctattttg
acggccagcgggaagaacccagtcatggagctgaatgagaagcggcgcggcctgaaatac
gagctcatctcagagagtggaggaagtcacgacaaacgcttcgtcatggaggtggaagtg
gatggacagaagtttcgcggtgcagggcccaataagaaagtagccaaagccagcgctgcc
cttgcagctctagagaaactcttctccgggccgaatgctgctggcaacaagaagaagaaa
ataatccctcagagtaaaggggcattagctgcagccgctgctgtgtctgctgttgcggtt
caggctgcacgaggccgaggaagaccaactctcacacgaggagccttcgtcagtgctgca
gcagcaccaggatacgtcacgccaggcttcggagccccatacgggtacagcgcagcggcc
gccactcctgcatacggtggtcttttcattgacaatcccttttaccagccgcggaccatc
gctcctttttttattcacttgggtcctcaagatctcttctctgacttctag
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integrated database retrieval system
