KEGG   Danio rerio (zebrafish): 558020
Entry
558020            CDS       T01004                                 
Symbol
xpoT
Name
(RefSeq) exportin-T
  KO
K14288  exportin-T
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    558020 (xpoT)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dre03016]
    558020 (xpoT)
Transfer RNA biogenesis [BR:dre03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    558020 (xpoT)
SSDB
Motif
Pfam: Exportin-T Xpo1 TPR_TNPO3_IPO13_3rd CRM1_C Thump_like
Other DBs
NCBI-GeneID: 558020
NCBI-ProteinID: NP_001038317
ZFIN: ZDB-GENE-041210-4
Ensembl: ENSDARG00000099652
UniProt: A0A8M1N9D2 A5PLB1
LinkDB
Position
4:831588..930423
AA seq 971 aa
MACESALPAIMDEQALMGLNPNADACYRQRALAYFEQLKASLDGWEVCAEALAKGVYSDD
HVKFFCFQVLEHQIKFRHGSLSAAQQQLIRETLMKWLQTQLMNVHPEKPFIRNKAAQVFA
LTFVMEYLTLWPKFFFDVLALVGLNPNGVDIYLRTLMAIDAEVVDRDILHSPEETRRNTL
IKDGMRGQCIPALVESWFQILQTYQHTHSELTCQCLEVVGAFVSWIDLNLIANDRFVNLL
LSHMSMEELREAACDCLFEIVNKGMDPVDKTKLVESLCQVLQSAGFFNVEQEEDVDFLAK
FSRLVNGMGQSLVLSWTKLSKTADEKISAETLRAVESKVPLMLQLLIHEDDDISANIVCF
CYDYLHVLKQLPALNEQQKSNVEAIMLAVMSKLKYDDEYNFENEGEDEAMFVEYRKQLKM
LLDRLAQVSPELLLEAVHRVFNATMQSWQTLQFMEVEVSIRLLYMLGEALPASHGAHFSG
DSAKTSTLQAMMRTLVSCGVSEYQHSSVTLEFFETVVRYDKFFLVEPQHIPAVLMAFLDH
RGLRHSSPKVRSRVAYLFSRFIKTLHKHMNAFIEDILSRIQDLLELAPPENGFPALLSSD
DQLFMFETAGVLIVNGESPAERKQGLMRGLLSPLMGAFRMLLEKLPLEPDEERQTALADC
LSHAVGFASRTSKAFSNKQTVKQCGCSEVYLDCLQTFLPALSCPVQRGALRSAVRSFLHR
MIICLEEEVLPFIPAASQHMLKDCEARDLQEFIPLISQITAKFKNQVSPFLQEIFMPLVM
SIFEVLSRPAEENDQTAALEKQMLRRSYFSFIQTIASSSSSQVMASQGAENIERVLFTII
QGAVDFPDPVAQKTCFIILSRLVELWGGKDGLVGFPDFIYKHIIPACFMAPLKTTFDLSD
AQTVLTLSECSLTLHMIHLKRGPECLQFLQEYLPSLHVSPEITQELCQVLQQPDVKVLKN
YMKVFFQQAKL
NT seq 2916 nt   +upstreamnt  +downstreamnt
atggcctgcgagtcggcgttacctgccatcatggacgagcaggccctcatgggactgaac
cccaacgctgacgcctgctacaggcagagggcgctggcatatttcgagcagttaaaggcg
tctctggatggatgggaggtgtgcgctgaagccctcgctaaaggggtttacagtgacgat
catgtgaagttcttctgctttcaagtcttggagcaccagatcaaattcagacacgggtcg
ctttctgcagctcaacagcagctgattcgagagactctgatgaagtggttgcagactcag
ctgatgaacgtgcatccagagaagcccttcatcaggaataaggcggcgcaggtttttgcc
ctgacgtttgtgatggagtatctgactttatggcctaaattcttcttcgatgtcctggct
ctggtgggtctcaatccgaatggtgtggacatttacctgcgaacactgatggccattgat
gcagaggtggtggatcgcgacatcctacacagccccgaggagacccgtaggaacactctg
attaaagacggcatgcgtgagcagtgcatcccggcgctggtggagtcctggttccagatc
ctgcagacgtaccagcacacacacagcgagctgacctgccagtgtctggaggtggtggga
gccttcgtgtcctggatcgacctcaatctcattgccaacgacaggtttgtgaatctgttg
ctcagtcacatgtccatggaggagctgcgggaggcagcgtgtgattgtctgtttgagatc
gtcaataaaggcatggatcctgtggacaaaaccaaactggtggagtctctgtgtcaggtg
ctgcagtctgctggcttcttcaatgtggagcaggaagaggatgtggattttctggccaag
ttctctcggctggtgaatggtatgggtcagtctctggtgctgagctggaccaaactcagc
aagacggcggacgagaagatttctgctgaaacgctgcgtgcggtcgagtccaaggttcct
ctgatgttacagctgctaatccatgaagacgatgacatttcagctaacatcgtctgcttc
tgttacgactacctgcatgtgctcaaacagcttccagcactcaacgagcagcagaagagc
aatgtggaggcgatcatgctggctgtgatgagcaaactcaagtatgatgacgagtataac
tttgagaatgagggtgaagatgaggctatgtttgtggagtacaggaagcagttaaagatg
ctgctggaccgactggcgcaggtttctccagagctgctgctggaggctgtgcacagagtc
ttcaacgccaccatgcagagctggcagacgctgcagttcatggaggtggaggtgtccatc
cggctgctgtatatgctgggtgaagctcttccagcatctcatggagctcatttctctgga
gactctgccaaaaccagcacactgcaggccatgatgagaaccctcgtctcctgtggtgtc
agtgagtatcagcattcctccgtcactctggagtttttcgagaccgtggtccgctatgat
aaattcttcctggtggagccgcagcacattcccgctgtcctgatggcgtttttagaccac
cgcggtctgagacacagcagcccaaaggtgcgcagtcgagtggcttacctgttctcacgc
ttcatcaaaaccctgcataagcacatgaatgcgtttatcgaggacattctcagcagaata
caggacctgctagagctcgctccaccggagaatggattcccagcgctgttgagcagtgat
gatcagctgttcatgtttgagacagcgggtgtgctgatagtgaacggtgagtctccagca
gagcgtaagcagggtctgatgcgcgggctgctgtctccactgatggaggccttcaggatg
ctgctggagaagctgccgctggagccggacgaggagcggcagacggcgctggcagactgc
ctcagtcacgctgtgggcttcgccagccgcaccagtaaggcgttcagcaataagcagaca
gtgaagcagtgcggctgctcggaggtgtatctggactgcctgcagacgttcctgccggcg
ctcagctgtcctgtgcagcgaggggctctgcgcagcgccgtccgctctttcctgcaccgc
atgatcatctgcctggaggaggaggtgctgcccttcatccctgccgcgtcccagcacatg
ctgaaggactgcgaggcccgagacctgcaggagttcatcccgctcatcagccagatcact
gctaaattcaagaaccaggtgtccccgttcctgcaggagatcttcatgccgctggtcatg
tccatctttgaggtgttgtctcgtcccgcggaggagaacgatcagacggcggcgctggag
aagcagatgctgaggaggagctacttcagcttcatccagaccatcgccagcagcagcagc
agtcaggtcatggccagtcaaggagcagagaacatcgagcgcgtgctgttcaccatcatt
cagggcgctgtggattttccagaccctgtcgctcagaagacctgcttcatcatcctgtcc
agactggtggagctctggggtggaaaagacggtttggtgggatttccggatttcatctat
aagcacattattcccgcatgcttcatggctcctctgaaaacaacctttgacctttcagat
gcgcagacggttctgacgctgtccgagtgttcgctgacgctgcacatgattcatctcaaa
agaggacccgagtgtctccagtttctgcaggagtatctgccctcactgcacgtctctcct
gaaatcacacaggaactgtgtcaagtgcttcagcagccggatgttaaagtcctgaaaaac
tacatgaaggtttttttccagcaggccaaactttaa

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