Danio rerio (zebrafish): 558020
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Entry
558020 CDS
T01004
Symbol
xpoT
Name
(RefSeq) exportin-T
KO
K14288
exportin-T
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
558020 (xpoT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dre03016
]
558020 (xpoT)
Transfer RNA biogenesis [BR:
dre03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
558020 (xpoT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-T
Xpo1
TPR_TNPO3_IPO13_3rd
CRM1_C
Thump_like
Motif
Other DBs
NCBI-GeneID:
558020
NCBI-ProteinID:
NP_001038317
ZFIN:
ZDB-GENE-041210-4
Ensembl:
ENSDARG00000099652
UniProt:
A0A8M1N9D2
A5PLB1
LinkDB
All DBs
Position
4:831588..930423
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AA seq
971 aa
AA seq
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MACESALPAIMDEQALMGLNPNADACYRQRALAYFEQLKASLDGWEVCAEALAKGVYSDD
HVKFFCFQVLEHQIKFRHGSLSAAQQQLIRETLMKWLQTQLMNVHPEKPFIRNKAAQVFA
LTFVMEYLTLWPKFFFDVLALVGLNPNGVDIYLRTLMAIDAEVVDRDILHSPEETRRNTL
IKDGMRGQCIPALVESWFQILQTYQHTHSELTCQCLEVVGAFVSWIDLNLIANDRFVNLL
LSHMSMEELREAACDCLFEIVNKGMDPVDKTKLVESLCQVLQSAGFFNVEQEEDVDFLAK
FSRLVNGMGQSLVLSWTKLSKTADEKISAETLRAVESKVPLMLQLLIHEDDDISANIVCF
CYDYLHVLKQLPALNEQQKSNVEAIMLAVMSKLKYDDEYNFENEGEDEAMFVEYRKQLKM
LLDRLAQVSPELLLEAVHRVFNATMQSWQTLQFMEVEVSIRLLYMLGEALPASHGAHFSG
DSAKTSTLQAMMRTLVSCGVSEYQHSSVTLEFFETVVRYDKFFLVEPQHIPAVLMAFLDH
RGLRHSSPKVRSRVAYLFSRFIKTLHKHMNAFIEDILSRIQDLLELAPPENGFPALLSSD
DQLFMFETAGVLIVNGESPAERKQGLMRGLLSPLMGAFRMLLEKLPLEPDEERQTALADC
LSHAVGFASRTSKAFSNKQTVKQCGCSEVYLDCLQTFLPALSCPVQRGALRSAVRSFLHR
MIICLEEEVLPFIPAASQHMLKDCEARDLQEFIPLISQITAKFKNQVSPFLQEIFMPLVM
SIFEVLSRPAEENDQTAALEKQMLRRSYFSFIQTIASSSSSQVMASQGAENIERVLFTII
QGAVDFPDPVAQKTCFIILSRLVELWGGKDGLVGFPDFIYKHIIPACFMAPLKTTFDLSD
AQTVLTLSECSLTLHMIHLKRGPECLQFLQEYLPSLHVSPEITQELCQVLQQPDVKVLKN
YMKVFFQQAKL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcgagtcggcgttacctgccatcatggacgagcaggccctcatgggactgaac
cccaacgctgacgcctgctacaggcagagggcgctggcatatttcgagcagttaaaggcg
tctctggatggatgggaggtgtgcgctgaagccctcgctaaaggggtttacagtgacgat
catgtgaagttcttctgctttcaagtcttggagcaccagatcaaattcagacacgggtcg
ctttctgcagctcaacagcagctgattcgagagactctgatgaagtggttgcagactcag
ctgatgaacgtgcatccagagaagcccttcatcaggaataaggcggcgcaggtttttgcc
ctgacgtttgtgatggagtatctgactttatggcctaaattcttcttcgatgtcctggct
ctggtgggtctcaatccgaatggtgtggacatttacctgcgaacactgatggccattgat
gcagaggtggtggatcgcgacatcctacacagccccgaggagacccgtaggaacactctg
attaaagacggcatgcgtgagcagtgcatcccggcgctggtggagtcctggttccagatc
ctgcagacgtaccagcacacacacagcgagctgacctgccagtgtctggaggtggtggga
gccttcgtgtcctggatcgacctcaatctcattgccaacgacaggtttgtgaatctgttg
ctcagtcacatgtccatggaggagctgcgggaggcagcgtgtgattgtctgtttgagatc
gtcaataaaggcatggatcctgtggacaaaaccaaactggtggagtctctgtgtcaggtg
ctgcagtctgctggcttcttcaatgtggagcaggaagaggatgtggattttctggccaag
ttctctcggctggtgaatggtatgggtcagtctctggtgctgagctggaccaaactcagc
aagacggcggacgagaagatttctgctgaaacgctgcgtgcggtcgagtccaaggttcct
ctgatgttacagctgctaatccatgaagacgatgacatttcagctaacatcgtctgcttc
tgttacgactacctgcatgtgctcaaacagcttccagcactcaacgagcagcagaagagc
aatgtggaggcgatcatgctggctgtgatgagcaaactcaagtatgatgacgagtataac
tttgagaatgagggtgaagatgaggctatgtttgtggagtacaggaagcagttaaagatg
ctgctggaccgactggcgcaggtttctccagagctgctgctggaggctgtgcacagagtc
ttcaacgccaccatgcagagctggcagacgctgcagttcatggaggtggaggtgtccatc
cggctgctgtatatgctgggtgaagctcttccagcatctcatggagctcatttctctgga
gactctgccaaaaccagcacactgcaggccatgatgagaaccctcgtctcctgtggtgtc
agtgagtatcagcattcctccgtcactctggagtttttcgagaccgtggtccgctatgat
aaattcttcctggtggagccgcagcacattcccgctgtcctgatggcgtttttagaccac
cgcggtctgagacacagcagcccaaaggtgcgcagtcgagtggcttacctgttctcacgc
ttcatcaaaaccctgcataagcacatgaatgcgtttatcgaggacattctcagcagaata
caggacctgctagagctcgctccaccggagaatggattcccagcgctgttgagcagtgat
gatcagctgttcatgtttgagacagcgggtgtgctgatagtgaacggtgagtctccagca
gagcgtaagcagggtctgatgcgcgggctgctgtctccactgatggaggccttcaggatg
ctgctggagaagctgccgctggagccggacgaggagcggcagacggcgctggcagactgc
ctcagtcacgctgtgggcttcgccagccgcaccagtaaggcgttcagcaataagcagaca
gtgaagcagtgcggctgctcggaggtgtatctggactgcctgcagacgttcctgccggcg
ctcagctgtcctgtgcagcgaggggctctgcgcagcgccgtccgctctttcctgcaccgc
atgatcatctgcctggaggaggaggtgctgcccttcatccctgccgcgtcccagcacatg
ctgaaggactgcgaggcccgagacctgcaggagttcatcccgctcatcagccagatcact
gctaaattcaagaaccaggtgtccccgttcctgcaggagatcttcatgccgctggtcatg
tccatctttgaggtgttgtctcgtcccgcggaggagaacgatcagacggcggcgctggag
aagcagatgctgaggaggagctacttcagcttcatccagaccatcgccagcagcagcagc
agtcaggtcatggccagtcaaggagcagagaacatcgagcgcgtgctgttcaccatcatt
cagggcgctgtggattttccagaccctgtcgctcagaagacctgcttcatcatcctgtcc
agactggtggagctctggggtggaaaagacggtttggtgggatttccggatttcatctat
aagcacattattcccgcatgcttcatggctcctctgaaaacaacctttgacctttcagat
gcgcagacggttctgacgctgtccgagtgttcgctgacgctgcacatgattcatctcaaa
agaggacccgagtgtctccagtttctgcaggagtatctgccctcactgcacgtctctcct
gaaatcacacaggaactgtgtcaagtgcttcagcagccggatgttaaagtcctgaaaaac
tacatgaaggtttttttccagcaggccaaactttaa
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integrated database retrieval system