Danio rerio (zebrafish): 558046
Help
Entry
558046 CDS
T01004
Symbol
trim2b
Name
(RefSeq) tripartite motif-containing protein 2
KO
K11997
tripartite motif-containing protein 2/3
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
558046 (trim2b)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
558046 (trim2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
DUF5128
Filamin
SGL
zf-B_box
DUF4934
NPV_P10
Mer2
Fib_alpha
DUF3584
Allexi_40kDa
DUF1351
CoV_S2
PI3K_P85_iSH2
Vitellogenin_N
YusW
Motif
Other DBs
NCBI-GeneID:
558046
NCBI-ProteinID:
XP_009304581
ZFIN:
ZDB-GENE-090312-70
Ensembl:
ENSDARG00000076174
UniProt:
B8A5M1
LinkDB
All DBs
Position
1:10003397..10033493
Genome browser
AA seq
669 aa
AA seq
DB search
MEAPQASPDSSSEECTVLEALPGKGTALICSQHKGKVSALYCLVCENAVCEDCMNGEHAE
HPTDSLEKAVDQQLAALQDKVDSAKNRLPQIREAVQYLREILQQLNSQRSSIEEDIHSSF
SELHKTLDTRKSVLLMELEVTYGLKQKVLQAQLDTLLQEESAINYNCSLTSEALDGGSKA
SVLQAHKEAGERLGDLSSQGLPLQPEENDQLDLMMEIEGLRKSIHNLGTIVTTNAVASQT
EASGDGLEQCIVGQPASVIITTRDKAGGLCKTGNAIISAEVYTPDGSIADGEIVDMKNGT
YEFQYTVKKEGNFSLALRLYDQHIKGSPFQLKVSSSPDDSPTTTTAANAASTGSSDGGAR
KRSAKSPGSRSRQKGVRRGGSLFSTPKKRVNPIEDDLIFRIGTKGRNKGEFTNLQGVAAC
SEGRILIADSNNQCVQIFSNTGEFQSRFGVRGRSPGQLQRPTGVAVHPNGDIIIADYDNK
WVSIFSSEGKYKAKLGSGRLMGPKGVSVDQNGHVIVVDNKACTVFIFQPSGKLITKFGSR
GNGDRQFAGPHFAAVNNNNEIIITDFHNHSVKVFNADGEFLLKFGSNGEGNGQFNAPTGV
AVDVNGNIIVADWGNSRIQVFDGSGSFLSYINTAADPLYGPQGLALTSDGHVVVADSGNH
CFKVYRYLQ
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccgcaggcttctcctgacagcagcagtgaggagtgtactgtactagaggct
ctgcctggcaagggaactgcgctcatttgctctcaacacaaaggaaaagtgtctgcgctg
tactgtttggtgtgtgagaatgcagtgtgtgaagactgtatgaacggagaacacgctgag
catcccacagattctctggagaaagctgtggatcaacaactagcggcactgcaggacaaa
gtggattcagccaagaacaggctccctcagatcagagaagcggttcagtatctgagagag
atcctgcagcagttgaactctcagcgcagctccattgaggaggacattcactcgtccttc
agcgaactgcacaaaaccctcgacaccaggaagagcgtcctgctgatggagctggaggtc
acgtacggactcaagcaaaaagtcctgcaggctcagttagacactctcctccaggaagaa
tctgccatcaactacaactgcagcctgaccagcgaagctctggacggaggaagcaaagcc
tctgtcctgcaggcccataaagaggcgggagagcgactcggtgacctgtccagccagggc
cttcctctccagcctgaagagaacgaccagctcgacctcatgatggagatcgaaggcctg
cgcaagtccatccacaacctgggcaccatcgtcaccaccaatgccgtggccagccaaact
gaggcgtccggagacggtctggagcaatgcatcgtgggtcagccggcatccgtcatcata
accacgagagataaagctggaggactgtgcaagactggaaacgccattatctcggctgaa
gtttacacaccggacggaagcatcgcagacggagaaattgtagatatgaaaaatggaacg
tatgaatttcaatacacggtgaagaaagaaggcaacttcagtctggcgctgagactttat
gatcagcatattaaaggaagcccatttcagctaaaggtgagcagttctccagatgattct
ccgacgaccaccaccgcagccaacgccgcgtccaccggctccagcgatggaggagcgaga
aaaaggagcgccaaatctccagggagccgcagccggcagaagggcgtcagacgaggagga
agcttgttcagcacacccaaaaaaagggtgaaccccatcgaggacgacctgatttttaga
ataggaacaaaagggaggaataaaggagagttcactaaccttcaaggagtcgcagcttgt
tcagagggaagaatcttaatcgcagacagtaacaatcagtgtgtgcagatattttccaac
acgggtgagtttcagagccggttcggggtgcgtggtcgttcaccgggtcaactacagcgg
cccactggagtagctgtacatcccaacggggacatcattatcgctgactatgacaataag
tgggttagcatcttctccagcgaaggcaaatacaaggctaagctgggctcaggacggctg
atggggccgaagggggtttctgtggaccagaatggtcatgttattgttgtggacaacaag
gcctgtacggttttcatcttccagcccagcgggaaactcatcactaagtttggcagcagg
ggcaacggagacagacaatttgcaggcccacactttgctgcagtgaacaacaataatgaa
atcatcatcacagactttcataaccactctgttaaggtatttaatgcagatggggaattc
ttgcttaagtttggctcaaatggtgaaggaaacggccagtttaatgctcccactggcgtt
gctgtggatgtcaatgggaacatcattgtggccgactggggaaacagtcgcatacaggtg
tttgacgggagcgggtcattcctgtcctacatcaacacggcagcggaccctctgtatggg
ccacagggtctggctttaacctcagacggtcatgtagtggtggctgattctggaaaccac
tgcttcaaagtctaccgttacctgcaatga
DBGET
integrated database retrieval system
