Danio rerio (zebrafish): 558068
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Entry
558068 CDS
T01004
Symbol
colgalt2a
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00310
Lysine degradation
dre00514
Other types of O-glycan biosynthesis
dre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
558068 (colgalt2a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
558068 (colgalt2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dre01003
]
558068 (colgalt2a)
Enzymes [BR:
dre01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
558068 (colgalt2a)
Glycosyltransferases [BR:
dre01003
]
O-Glycan biosynthesis
O-linked Gal type
558068 (colgalt2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Aminotran_4
Motif
Other DBs
NCBI-GeneID:
558068
NCBI-ProteinID:
XP_017208065
ZFIN:
ZDB-GENE-070705-32
Ensembl:
ENSDARG00000078299
UniProt:
A0A8M6YUW4
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Position
2:7213207..7235296
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AA seq
599 aa
AA seq
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MMDPRASGKLLLGLVMLESWIGFIYTHTDLEPVLHETSLLNPKVAIAILARNSEHSLPYF
LGCIERLDYPKDRISIWAATDHNTDNTTGMLREWIAGVEDLYHSVQLHTMEQEKSSYVDE
LGPKHWPETRFTHVMKLRQAALKSARAQWADYVLFTDSDNLLTNTQVLNQLISENRTLVA
PMLDSRTLYSNFWCGMTSQGYYKRTPHYVPIRTWKRTGCHPVPMIHSTMLIDLRRRASEL
LAFYPVHHHYLWALDDIMAFAFSARQTGVQMFICNREHYGYLPQPLQMKQTLEEEVESFS
HTVTEALVDFKMETSQYLHIVSKPKDTMAFNQVYLINLKRREDRRDRMLRSLEVLGIDVT
LTDAVDGKAMNSTQLRTLGIEMLPGFKDPYSDRVLTKGEIGCFLSHYNIWKKVVELQQQQ
VLVLEDDVRFETNFKSRLNTIMEDVKRSGLQWDLIYVGRKRLQIKHPERWVEGVKNLVSP
DYSYWTLGYALSLQGAKILLEAQPLSKMLPVDEFLPVMFNKHPKKEYMSHFQLRNLKAFS
VQPLLLFPTHYTGEAGYFSDTETSSIWDDETVSTDWDRNRIRGGKTTTSVSESSPKDEL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgatggacccgagagcatctggaaagcttctgcttggactagtaatgttagagtcatgg
atcggatttatttatactcacactgacctggagcctgtcctacatgagacatctctactc
aaccccaaagtagccattgcgattttggctcgaaacagcgaacacagtcttccttatttt
ttaggatgcatcgagaggctggattatcccaaggaccgtatctctatctgggctgctact
gaccacaatactgacaacaccactggaatgctgcgtgaatggatcgctggagtggaggat
ttgtatcattcggtacagctgcacaccatggagcaggagaagagttcttatgtggatgag
ctgggccccaagcactggccggagactcggttcactcatgtgatgaagctgaggcaggcg
gcacttaaatcagcccgggcgcagtgggcagactacgtcctgttcacagacagtgataac
ctgcttacaaacacacaagtgctgaatcaactgatttctgaaaatcggacgctggtggct
ccaatgctcgactcaagaacgctctattcaaacttctggtgtggcatgacctcacagggc
tattataagcgaacaccacattatgtacccattcgaacctggaagcgaaccggttgtcac
ccggttcccatgattcactccacaatgttgatagacctgcgccgcagagctagtgaattg
ctggccttttaccccgtgcaccatcactatctttgggccctcgatgatatcatggcattt
gctttttctgcaagacaaacaggtgtgcagatgttcatttgcaacagagagcattatggg
tatctgccacagcctctgcagatgaagcagacgctggaggaggaagtggagagttttagc
cacactgtcactgaggcgctagttgactttaaaatggaaacttcacagtatctgcacatt
gtctccaaacccaaagacaccatggctttcaatcaggtctacctgatcaatctgaagcgt
cgggaagatcgtagagatcgtatgctgcgctcgctggaagtcctgggcatagacgtcacc
cttaccgatgcggtggatggcaaagccatgaattcaactcagctcaggactttaggaatt
gagatgcttcctggttttaaagatccgtactctgaccgagtgctgactaagggggaaatt
ggctgcttccttagtcattataacatctggaaaaaggtggtggagctccagcaacagcag
gtgcttgtactggaggacgatgtcaggtttgagacaaactttaagagccgcctcaacacc
atcatggaggatgtgaagcgatcaggcctccagtgggacttaatttatgtgggacgtaag
cgtttgcaaatcaagcatccggagcgctgggtggagggagtgaagaacctggtgagccca
gattactcgtattggacattgggatatgccctttcactgcaaggagcaaagatacttctg
gaagctcagcctctcagcaagatgctgcccgttgacgagtttctacctgttatgttcaac
aagcaccccaagaaggaatacatgtctcattttcaattgagaaacttgaaggctttctcc
gttcaacccttgctgctgtttcccacacattacactggagaagcaggctatttcagtgac
acggagacctccagcatctgggatgacgagaccgtgtccactgactgggatcgtaatcgc
atccgtggaggaaaaaccaccacatctgtctctgagagcagcccaaaggatgaactctga
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