Danio rerio (zebrafish): 558213 Help Entry 558213            CDS       T01004                                  Symbol rc3h1b Name (RefSeq) roquin-1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism dre  Danio rerio (zebrafish) Brite KEGG Orthology (KO) [BR:dre00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:dre03000]     558213 (rc3h1b)    04121 Ubiquitin system [BR:dre04121]     558213 (rc3h1b) Transcription factors [BR:dre03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     558213 (rc3h1b) Ubiquitin system [BR:dre04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     558213 (rc3h1b) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-C3HC4 zf-CCCH zf-C3HC4_2 zf-CCCH_4 zf-CCCH_UNK Prok-RING_4 zf_CCCH_4 FYVE NS3_helicase_C Baculo_IE-1 RING_XB3-XBAT31 zf-RING_6 Motif Other DBs NCBI-GeneID:  558213 NCBI-ProteinID:  NP_001108155 ZFIN:  ZDB-GENE-060503-79 Ensembl:  ENSDARG00000063182 UniProt:  A0A8M1NFT2 LinkDB All DBs Position 2:complement(7468360..7508237) Genome browser AA seq 1111 aa AA seqDB search MPVQAPQWTEFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAINTD IEQLPVNSALLQLVGGQVPKQQPVALITCPEDTKHYDEARQCVEELALYLKPLSSARGVG LSNAAQSMLSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ANIDPSPDAPPPTWEQLEKGLVAVKTVVHGLVDFIQNHSKKGADTQQPPQHSKYKTYMCR DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLAARVPCTPGLLPEDVIPLEPTRKGSGI TNGLPQLIPRGTDSSTYDLLLKPKMDGPSLSAPGSPPDSLDKPGLSLTPHPVPHPRTEHL TMPKQGAVVPRGTPQMYPQQQPELFYPEPARPPPSGSQYDAQYPAGNPYAYQPPQYVSHR YIRNPPPPGESAVPPYPEPYPGYGPESQYQSHHSSPSFSTHTYAPPSHYSRRHYPAPPPP FAPPRDDLVRMSPVPLDLPPAAMPPPAGAAGSLYHTQETSSRDRYAPDGYYPAGPHHSQM RSHIRDPYRSQPSLDDLHRRRKELLIQLEERKVISPPPFAASPTLPTHPFPHDYPQEYLE DGSKAFGSREPDYAGQYSPWSCDTIGSYIGSKDAKPKDVSSAVEMMTAEGKVLREPALDT QRRSAEAKDDDPIIPFGPLPTVSPFGAISRTSKTGYQTTGPVQAIASSQASGPKHMTMTA DYPYGNHSGWGGASYPQHQSINSQGHFSERERLQRNYICIEYLPVSGPDREQLKIELQQV NQQISQQTRGMEAASNSMLLQREACALAAQPSAGVKWSSGATVSSEQLSRELDHVEREIR TREIAMENQVAHEYKLKAIENGQPDHKAQLEELSLALGEVSNGSSGMKPASSMGGSMLSL TNKTSSLSLCSADQAASSADLQKNGVVHSCS NT seq 3336 nt NT seq  +upstreamnt  +downstreamnt atgcctgtacaagctccacaatggacagagtttttgctgtgtccgatatgcacccagacg ttcgaggagacggtgcgtcggcccatcagtctgggctgtggccacaccgtttgcaagatg tgcctcaacaagctgcaccgcaaggcctgcccctttgaccagacggccatcaatactgac attgaacagctgcccgtcaactcggccttgctacagctggtcgggggtcaggttccgaaa cagcaaccggtggcgctcattacgtgtccagaggacacaaagcattatgatgaggcacgg cagtgtgttgaggagctggccctctacctcaaacccctcagcagcgcacgaggagtgggg ttgagtaatgctgctcagagcatgctgagccggcctatgcagaggaagctggtgactctg gtgcactgtcaactggtggaggaagaaggacgggtcagggccatgcgggcagctcgatct ctgggtgaaagaactgttacagagctcattctgcagcaccaaaacccccagcagctctca tccaacctgtgggctgctgtgagagccagaggctgccagtttctgggtcctgccatgcag gaggaggcactgaagctggtgttgttggccttggaagatggatctgctctttccagaaag gttctggttctttttgtggtacagagactggaaccgagatttcctcaggcctccaaaacc agtattggacatgtagttcagctcctctaccgtgcctcttgctttaaggtgactaagcga gatgaggattcatcgctaatgcagttaaaagaggagttccgcacatatgaggcacttcgg cgggaacacgactctcagattgttcaaattgcaatggagggagggcttcgcattgccccc gatcagtggtcgtctctgctttatggagaccagtctcataaatcccacatgcagtccatc attgacaagttgcagaccccagcatcgtttgctcagagcgtgcaggagctgaccatcgct ctgcagaggacaggtgatccagccaatctcaaccggctaagacctcatctggagttgctc gctaacatcgaccccagtccagatgctcctcctccaacctgggagcagcttgagaagggt cttgtggcggtaaagacggtggtgcatggccttgtggacttcatccagaaccacagcaag aagggtgcagacactcaacagcccccacagcacagcaaatacaagacatacatgtgcaga gacatgaagcagaaaggaggctgtcccagaggagctagctgcactttcgctcactctcag gaggagctggaaaagtatcgtaaaatgaacaaacgtcttgctgcgcgagtgccctgcacc cctggcctgctgcctgaggacgtgatcccactggagccaacccggaagggctctggcatt accaatggtcttccccagctcatccccagaggcacagactcttccacgtatgacctctta cttaaacccaaaatggatggccctagtctgagtgctcctgggtcaccaccagactctttg gataaacctggcttgtctctgacaccccaccctgtgcctcatcccagaacggagcactta accatgcccaagcagggggcagtcgtgcccagaggtacaccgcagatgtatccacagcag cagcctgagctcttctatccagagcccgccagacctcctccctcaggatctcagtatgat gctcagtacccagcaggtaatccttacgcgtaccaacctccacaatacgtttctcaccgc tacatccgtaatccgcctcccccgggtgagtcggcagtaccaccttacccggagccctac ccaggttacggcccagaaagccaatatcagagccaccactccagtccctctttctcaaca cacacctatgcaccgccctcccattacagtcgcagacactatcccgcacccccaccccca tttgcccctcccagagatgacttggtcaggatgagcccagttcctttggatcttcccccg gctgctatgcctcctccagcaggggccgcaggttccctgtaccacactcaagagacatca tccagagaccgatacgcaccggacgggtactatcctgctggaccacaccacagccaaatg aggtctcacataagagacccgtatcgctctcagcccagtctggatgacttgcatcgcagg cgtaaggagctgctcatccagctagaggagaggaaagtcatctctcctccacccttcgct gcctccccaactctccccacacacccgttcccccacgactaccctcaggagtatttggag gatggctctaaggcctttggaagtcgggagccagactacgctgggcagtattccccctgg tcatgtgacaccataggatcatacatcggctccaaggacgctaaaccaaaagatgtcagt agtgctgtggagatgatgactgcagagggaaaagttttgcgtgagcctgcgctggacaca cagcggcgctctgcagaagccaaagacgacgatcccatcattccctttggccctctgccc actgtgtctccatttggtgccatttcgcgtacctctaaaacgggttaccagaccactggg cctgtgcaggccatagcatcctcacaggcctcagggcccaaacacatgacgatgacagca gactatccatatggaaaccacagcggatggggtggagcgtcgtacccccagcaccagagc atcaactctcagggacacttcagcgagcgcgagagattacagcggaattatatatgcata gaatatttgcctgtgtctggcccggaccgtgagcagctcaaaattgagctccagcaagtt aaccaacagatcagtcagcagacccgcggcatggaggctgccagtaactccatgctcctg cagagggaggcgtgtgcgctggcggctcagccctccgctggggtcaagtggtcttcagga gccacagtatctagtgagcagctcagccgagagctcgatcacgtagagcgagagatcaga actcgggagatcgccatggagaaccaggtggctcacgaatacaagctgaaggccattgag aacgggcagcctgaccataaagcccaactggaggaactctccttagcactgggtgaggtg tctaacggatccagtggcatgaagccagccagtagtatgggcggatctatgctctcactg accaataagacgtcttctctcagcctttgttctgctgaccaagcagcgagtagcgcagac cttcaaaagaatggtgttgttcactcttgctcttaa

DBGET integrated database retrieval system