Danio rerio (zebrafish): 558337
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Entry
558337 CDS
T01004
Symbol
cercam
Name
(RefSeq) inactive glycosyltransferase 25 family member 3
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00310
Lysine degradation
dre00514
Other types of O-glycan biosynthesis
dre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
558337 (cercam)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
558337 (cercam)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dre01003
]
558337 (cercam)
Enzymes [BR:
dre01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
558337 (cercam)
Glycosyltransferases [BR:
dre01003
]
O-Glycan biosynthesis
O-linked Gal type
558337 (cercam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
558337
NCBI-ProteinID:
XP_009303445
ZFIN:
ZDB-GENE-030131-9787
Ensembl:
ENSDARG00000079049
UniProt:
E7F0F2
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All DBs
Position
10:10351700..10381165
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AA seq
591 aa
AA seq
DB search
MLSWIITIWTFLAVVQCYFSEENYTEESKMQPPTVVIAIIARNAAHSLPHYLGALERLNY
PKERISVWAATDHNIDNTTAMLREWLTVMQTQYHYVEWRPSDKPTSYAGELGPKHWTNSR
YEYIMKLKQAALNFAKKRWADYILYSDTDNILTNPDTLHLLMAENKSVIAPMLDSQSAYS
NYWCGITPQGYYRRTAEYFPTKQRQRLGCYPVPMVHSTVLLDLRKQGTRKVSFHPPHKDY
SWPFDDIIVFAFSCRVSEVQMYLCNKERYGYLNVPAKPHQTVEDDRINFVHLYLESLIHG
PPMYVSRYVHVPPKQSDLMGFDEIYLINLRRRQDRRDRMLWSLYELEIDAKVVDAIDGAA
LNSSDIKILGVDLLPGYYDPFSGRTLTKGEVGCFLSHYYIWKEMVDMQLDKALIFEDDVR
FQANFKRRMMRLMEEVEQVELDWDIIYLGRKKVNPGEEVPVENVRNLVFADYSYWTLSYA
ISLQGAQKLLNAEPVSKMLPVDEFLPIMYDKHPNEDYKSHFPNRNLMAYSTHPLLVQPCH
YAGDAEWVSDTETSTLWDDDSVRTDWRGSHKTLKGSQPPPGLQSATYKDEL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgttatcttggattataactatttggacctttcttgcggtagtacagtgttacttttcc
gaagaaaattacaccgaggagtcaaagatgcagccgcccactgtcgttatagccataatc
gcacggaacgccgctcattctttacctcactaccttggtgccctcgaaagattaaactat
cccaaggagcgaatctctgtctgggcagcgacggaccacaacattgacaacacgacagct
atgctgcgagaatggctgaccgtcatgcaaactcaatatcactatgtggagtggagacct
tcagataaacccacgtcttatgcaggagaattggggccaaagcactggacaaacagccgc
tatgagtatattatgaagcttaaacaggcggcattaaactttgccaagaaacgctgggct
gactatattctgtattcagacacagacaacatcctgaccaatcctgacacgctacacctt
cttatggcagagaataaatcagtcattgccccaatgctggactcacagtcggcttactcc
aactactggtgcggcatcactccgcagggttactatcggcgcacagcagagtattttccc
acgaagcagcgtcagcgtctgggctgttatcctgtgccgatggtccactccactgtcctg
ctggacctgcgcaaacagggcacccggaaagtgtcatttcacccccctcacaaagactac
tcctggccctttgacgacatcatcgttttcgcattctcctgcagagtatcagaggttcag
atgtatctgtgcaacaaggagcgttatgggtatctgaacgtgcctgcaaagcctcatcag
actgtggaggacgatcgcatcaattttgttcacctttacctggaatctctgattcatgga
cccccaatgtacgtctctcgctacgtccacgttcctcccaaacagtcagatctcatgggt
ttcgatgagatttacttgataaacctgcgcagacgtcaagaccgccgggacaggatgtta
tggtctctgtatgagctagagattgatgctaaagttgtggatgctatagatggagcagct
ctgaacagcagcgatattaagattctaggtgtggatcttttacctggttactacgatcct
ttctctggacgcacactgaccaaaggagaggtgggctgcttcctgagccactactatatc
tggaaagagatggtagacatgcagcttgacaaggcgctgatctttgaggacgatgtacgt
tttcaagccaattttaaacggcgcatgatgcggctgatggaggaggtggagcaggtggag
ctggactgggacatcatatacctgggcagaaagaaggtgaaccctggagaggaagttcca
gtggagaacgtgaggaatctggtgttcgccgattactcctactggacgctgtcttacgcc
atctctctccagggagctcagaagctcctcaacgctgaacccgtatccaagatgctccct
gtggatgagttcctgcccatcatgtatgacaagcacccaaatgaggactacaaatcccat
tttcccaaccgaaatctgatggcgtactccacacaccctctgctggtgcagccatgtcat
tacgccggagacgcggagtgggtgagcgacacagagacctccacattgtgggatgatgac
agcgttcgcactgactggagaggctcacataagactctgaagggctcacagccacccccc
ggcctgcagagcgccacctacaaggatgagctgtga
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