Danio rerio (zebrafish): 558350
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Entry
558350 CDS
T01004
Symbol
eme1
Name
(RefSeq) crossover junction endonuclease EME1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03440
Homologous recombination
dre03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
558350 (eme1)
03460 Fanconi anemia pathway
558350 (eme1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dre03400
]
558350 (eme1)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
558350 (eme1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
Motif
Other DBs
NCBI-GeneID:
558350
NCBI-ProteinID:
XP_005156276
ZFIN:
ZDB-GENE-030131-3191
Ensembl:
ENSDARG00000076913
UniProt:
E7F6N8
Structure
PDB
PDBj
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All DBs
Position
12:complement(23432152..23443766)
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AA seq
556 aa
AA seq
DB search
MTCVSRPGFVLSDSESSDSEELPVFDFSQSQTRQTNLVVLDSSDSEMAPVANPVSSLEVQ
TSAGATKSDVLMVSSASEDEEEPMIPLAVRLKQKQCGLSISATNAEQSRASNAVSNGCSR
LLDVPAYHINPEAQPVQRNKISSNITRHYSSNHDAPYLTKEPEAENGTYLAKRKKTPAEV
EAARQEALRKRAIREHQQEERGRLRMEKKALADAVKALRPEECIKHTVVTVDPGLLQLEG
GGALLTSLHAMGCNCAIEKQSLPRSVCWARRSPCPQSGEMKSFPESYTIIQVPVDDFVTM
INSYCKRQSSSVLTDTGISLTAWIQGLMSRNPGRSLSLVVIDIEKYFRSQNSKCQKKYRE
AVLGEEKNVGLQGGQKKRRKKDDINQLPEVSRVQVEEALVDLQLQTGVQVRFLSTWKDFT
DYITMSTKAVAEAPFKREREKTGFTFCLESEWAGGQKVDRTGNGLLQVWKRQIQQLNRVS
LDMASAILSAYPSPRLLAQAYTRCRSEQEKVGLLSDLLIRRGEGVTSTTRRVGPELSKRV
YLMMTSSDDQQPLDSA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgacttgcgtcagcagacctggattcgtcttaagtgacagtgagtcgagtgattcagaa
gagctgcctgtgttcgatttctctcagtcacaaaccagacagaccaacttggtggtttta
gacagttcagactcagaaatggctcctgttgcaaatccagtttcatctctggaggtccaa
acttctgctggagccactaaaagtgatgtgctgatggtcagcagtgctagcgaggatgag
gaggagcccatgattcccttagctgtgagactcaaacagaaacagtgtggtctgtccata
tccgccaccaatgcagaacagagccgggcttccaatgcagtttcaaatggatgttcacgc
ctcttagatgttccagcatatcatatcaaccctgaggcccagccagttcaacgcaacaag
atcagtagcaatataacaaggcattacagctcaaaccatgatgcaccatacctcacaaaa
gaacctgaagcagagaatggcacttacctggccaaacgcaagaaaaccccagcagaagtg
gaggctgccagacaagaagccctgaggaaaagagcaattcgagagcaccaacaggaagag
agggggagattgaggatggagaagaaagctctggctgatgctgtgaaagccctaaggcca
gaggagtgcatcaaacacacggtggtgacggtcgaccctggtctgttgcagctggaaggt
ggcggcgctctcctgacttccctgcatgccatgggctgcaactgtgccatagagaagcag
tctcttcctcgcagtgtctgctgggcgagacgctcgccctgccctcagagtggtgagatg
aagtcttttccagagtcatatactatcatccaagttccagtggatgactttgtgaccatg
attaacagctattgcaagaggcaaagcagcagtgttttgactgatactgggatatcactg
actgcctggatacaaggacttatgagcaggaatccaggcagatccctcagtctagttgtg
attgacatagagaagtacttcagatcccagaattcaaaatgtcagaagaaataccgtgag
gcagtgctgggcgaggagaagaatgtgggacttcagggagggcagaaaaagagaagaaag
aaagacgatatcaatcagcttcctgaggtctcgcgagtgcaggtggaggaggctttggta
gacctgcagttgcaaaccggggtgcaagttcgcttcctctctacctggaaagacttcact
gattatattaccatgtcaaccaaagcagtagctgaggcgccgttcaagcgggagcgagag
aagacgggatttacgttttgtttggagagtgagtgggctggaggtcagaaggtagaccgc
acagggaatggccttctgcaagtttggaagagacaaatacagcagttgaaccgcgtcagc
cttgatatggccagtgctatactcagtgcctacccctctcctcggcttcttgctcaggca
tacacacggtgcagatctgaacaggaaaaagttggcttgttgtcagacttactcattcgt
cgtggagagggtgtgacatctacaacccgtagagtcggtccagaactttccaaacgagtc
tatcttatgatgacctcaagtgatgaccaacaaccccttgattctgcatga
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