Danio rerio (zebrafish): 558456
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Entry
558456 CDS
T01004
Symbol
jarid2b
Name
(RefSeq) protein Jumonji
KO
K11478
protein Jumonji
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
558456 (jarid2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
558456 (jarid2b)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
558456 (jarid2b)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
558456 (jarid2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
558456
NCBI-ProteinID:
NP_001189388
ZFIN:
ZDB-GENE-060503-246
Ensembl:
ENSDARG00000062268
UniProt:
Q1LVC2
LinkDB
All DBs
Position
19:28385657..28573687
Genome browser
AA seq
1319 aa
AA seq
DB search
MSKERPKRNIIQKKYDDNDGMPWSEERVVRKVLYLSLKEFKSAQKRQLCDGIDDEGKGPN
ASLSNGQLNGSKGGHKEDGSRSQRKDGGGEYSVDGPAKKRPRLHAQRKFAQSQPNSPSNT
PVKMADPSLPTPLTHITFLSRRKPKTEDFLTFICLRGSPALPSNMAYFGCSQDEEDLEDE
DEIEEEKAPSVASTSCQSTPKKGKPHGKINGLVLNGHKVHKDKELTPRSKARESSVGRDR
SERCDESEISHKHTAATAKSHNTNGHNYRRAAEELRKQVSKVNGLTRASSVGTHKASGKK
QKDFRLPSKTVKYTATVSKGHVTYTKAKRELVKKAKLNHSKHGASAGLRAYSNNHHHNSH
HATSNGHGRPQLSHSGKAQSINAKTRKQVLLSNGVHKMTNGSRLNGRLNGRHSAREEEVV
DRPVRQGLRNSKRRSDAMTLLGAVTESEETKTKQQTTEVKKAKVQPSPLETRSKKALNQF
KSPNIVTIAHSITEMAASPIQKTGPAPPPSPPAAPASPSMPQNPAIPEPARQRPKRASAG
KLMFIRKAQQRAQTNPTLNRTTSTTSASKSFKPAEPTHTPPPRLDRDRERERERERSRAR
YAALGDVPIFKPSSREFQDPLVYLDSFREQVESCGLCRVLPPTDWRPECKLNDEMRFVTQ
VQRIHKLGRRWGPNVQKLACIKKHLKSQGISMDQPPVIGKSFKSSAFRSAFVCIGGCEVD
LARFSELVCDLGGMQQVMDLKKWSRLADLLRIPKSAQDRLAKLQEAYLQFLLSYDLLSPE
ELQRLEQEVRAEKEALERKRGPLEGHSDNGHHSLALPRYEPKNGLNGLSHRNGFRNHHKE
PDIQRQAGRRRLFAQEKKGEKVECEETEEEMEDEGVLSDQHKCIYKGRSVSLTTFYRIAR
NTMMMYFNKEPGAAEVEQDYWRIVEQRDCHVAVHYGKVDTNTHGSGFPVGKSEPFSKHGW
NLTVLPNNSGSILRHLGAVPGVTIPWLNIGMVFSTSCWSQDQNRLPYIDYLHTGADCIWY
SIPAEEKTKLDKVVHTLLQANGTPGLEMLEKNVMISPEVLCREGIKVHRTVQQSGQFVVV
FPGAFVSRVCCGYSVSETVHFATPQWMNLGYEAAKDLKCRRIAKPFSMEKLLYQIATAEA
KRENRLVLSTISSLLKDLRNIEMKQRQELYEAGLLSSARYCTHDHNQSPADTRKKPRKWL
ALESSERRCQMCQHLCYLSMVVQENENVVFCLECALHYVEKHKNCRGLKMMYRYDEEQIN
SLVNQVCGKALVRSGSEVCNGSSPIKPPAKRGPRKRESMKITLIPLPTHPSKSAAAAVS
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaagacctaagaggaatatcattcagaagaaatacgatgataatgatggg
atgccctggtcggaggagcgagtggtgcggaaggtgctttatctctcgctaaaggagttt
aagagcgcacagaagcgccagctctgtgacggcatcgacgatgagggaaaaggccctaat
gcttccttgtcaaatggacagctgaatggttctaagggaggacataaagaggacggatct
cgctctcagaggaaagatggaggaggcgagtactctgtggatggtccggctaaaaagagg
cccagactgcatgcacagaggaagtttgctcagtctcaacccaactctcccagcaacaca
ccagtgaagatggctgacccctctctgcccacaccgctcacacacatcacattcctctcc
agacgcaaacccaagacagaagacttcctcaccttcatatgcctacgaggctcaccggca
ttacccagtaacatggcctacttcggctgctctcaggatgaggaggatctggaagacgaa
gatgagattgaagaagagaaagcacccagcgtggcatctacatcgtgccagtctacacct
aagaagggcaaaccacatggcaagatcaacggactcgtgttgaatggccataaggtacac
aaggacaaagagctcactcccagatccaaagccagagagtcgtctgtggggagagatcgc
agcgagaggtgtgatgagtctgagatctcccacaaacacacggcagccacagccaagagc
cacaacaccaatggccacaactacaggagagctgcagaggagctccgaaagcaggtctcg
aaagtaaatggactcacaagggcatcatcagttggcacgcataaagccagtggcaaaaag
cagaaagactttcgtctgccgtccaaaactgtgaagtacacagccaccgtgtccaagggc
cacgtcacctacaccaaagcaaaacgagaactggttaagaaagccaaactcaaccacagc
aagcacggagcttctgcaggccttcgtgcttacagcaacaaccatcaccataattctcat
catgcaaccagcaatggccatggccggccccagctctctcactcaggaaaagcccaaagt
atcaatgcaaaaacccgcaaacaggtgctattgtcgaatggggtgcataagatgactaat
gggagccggcttaacggcaggctaaatggacgccatagtgccagggaagaagaggttgtt
gaccgaccagtgcggcaaggactgcggaactctaaacgcagaagtgatgccatgacattg
cttggagctgtaactgagagtgaagagactaaaactaagcagcaaaccactgaggttaag
aaagctaaagtgcagcctagcccacttgaaactcgcagcaagaaagccctgaatcagttc
aagtcccctaacatagtcactattgcacatagtatcactgaaatggctgcctcccctatt
cagaaaacgggtcctgctcctcctccatctccccctgctgctccagcttccccgtccatg
ccccagaaccctgcaatccctgagccagcacgacagcgacccaaacgtgcctctgctggc
aaactgatgttcatcagaaaagcacagcagagggcccaaactaatcctaccctcaaccgg
accacatccactacctcagccagcaagtccttcaaaccagcagagcccacacacacacct
ccacctcggctggacagagacagggagcgtgagagggaaagggagagaagcagggcaagg
tatgcagccttgggggatgtgcccatttttaagcccagctccagggagttccaggaccct
ttggtgtacctagactcatttcgggaacaggtcgagtcatgtggactgtgcagagtgctg
cctcctactgactggaggccagagtgcaaactcaatgatgagatgcgttttgtgacacag
gttcagcgcatacacaagctgggcaggcgttgggggcccaatgttcaaaaacttgcctgc
attaagaagcacctcaaatctcagggcatctcaatggatcagccacctgttataggcaag
tcctttaaatcctctgcatttagatctgcttttgtttgtataggtggctgtgaagtagat
ttggctcgtttttctgagctggtctgtgacttgggtggaatgcagcaggtgatggacctg
aaaaaatggagccggctggccgatctgcttcgcattcccaaatcagcacaggatcgtctg
gccaagctccaggaggcctacctccagtttctgctctcttatgacctgctttcacctgag
gagctccagcgtttggagcaggaggttcgagcggaaaaggaggctctggaacgcaagcgg
ggacccctggagggtcactctgataacggccatcattctctggctcttcctcgttatgaa
cccaagaatgggctcaatggcctcagccatcgcaatggcttccgcaatcaccacaaagag
ccagacatacagcggcaggctggccgccgcagactgtttgctcaggaaaagaaaggggaa
aaagtggagtgtgaagagacagaggaggagatggaagatgaaggtgttctcagtgaccag
cacaaatgtatatacaaggggagatcggtatctttgaccaccttttacagaatagcaaga
aatacaatgatgatgtacttcaacaaagagcctggggctgctgaagttgagcaagattac
tggcggatagtggagcagagggactgccatgtagcagtgcattatgggaaagtggacaca
aacacacatggaagcggcttccctgtgggcaagtcggagccattctccaagcatggatgg
aacctcaccgtccttcccaataactctggatccattctgcgccatcttggtgctgtgccg
ggggtgactattccctggctgaacatcggcatggtcttttctacctcatgctggtcacaa
gaccaaaaccgccttccatacattgattacttacacactggtgctgattgcatttggtat
tctattcctgctgaggaaaagacaaagcttgataaagtggtgcacacactgctacaggcc
aatggaacgccgggactggaaatgctggagaagaatgttatgatttctccagaggtgctt
tgtcgtgagggaataaaggtccatcgtacagttcagcagagtgggcagtttgtggtggtc
ttccccggtgcatttgtgtccagggtgtgctgtggctacagtgtgtctgaaactgtgcac
tttgccacaccacagtggatgaacctgggctacgaggctgctaaggacctgaaatgcagg
cgcatagcaaaacccttctctatggagaagctgctgtatcagatcgccacagctgaggcc
aaacgagaaaacagacttgtgctcagtacaatctcttctcttctcaaagatctcaggaac
atagagatgaagcaaaggcaggagctgtatgaagcagggctgctctcctccgcacgctac
tgcactcatgaccacaaccaatcacctgctgacaccaggaagaagccgcgcaagtggctg
gcactggagtcatcagagaggcgctgccaaatgtgccagcacctctgctacttatctatg
gtggtgcaggagaacgagaatgtggtgttctgtctggagtgtgcgctgcactatgtggag
aaacacaaaaactgccgcggactcaagatgatgtaccgctatgatgaggaacagatcaac
agtttggtgaatcaggtgtgtggtaaagcactggtgagaagcgggtcagaagtttgtaat
ggctccagtcccattaaaccaccggccaaacgcggccctcgcaagagggaatccatgaag
attactctcatccctctgccaacccacccatccaaaagtgccgctgctgccgtctcatga
DBGET
integrated database retrieval system