Danio rerio (zebrafish): 558552
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Entry
558552 CDS
T01004
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04145
Phagosome
dre04540
Gap junction
dre04814
Motor proteins
dre05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
558552 (tubb1)
09144 Cellular community - eukaryotes
04540 Gap junction
558552 (tubb1)
09142 Cell motility
04814 Motor proteins
558552 (tubb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
558552 (tubb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
558552 (tubb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dre04812
]
558552 (tubb1)
04147 Exosome [BR:
dre04147
]
558552 (tubb1)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
558552 (tubb1)
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
558552 (tubb1)
Exosome [BR:
dre04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
558552 (tubb1)
Exosomal proteins of colorectal cancer cells
558552 (tubb1)
Exosomal proteins of bladder cancer cells
558552 (tubb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
558552
NCBI-ProteinID:
NP_001313351
ZFIN:
ZDB-GENE-110408-5
Ensembl:
ENSDARG00000053066
UniProt:
E7FC32
LinkDB
All DBs
Position
6:52518604..52525318
Genome browser
AA seq
466 aa
AA seq
DB search
MREIVHLQIGQCGNQIGSKFWEVISDEHGINRVGAYEGDMDLQLERVNVYFNEAHGGKYV
PRALLVDLEPGTMDSVRGSQIGQLFRPDNFIHGNSGAGNNWAKGHYTEGAELVEQVVDRV
RNEAESCDCMQGFQFVHSLGGGTGSGMGTLIINKIREEYPDRIMNSFSVMPSPKVSDTVV
EPYNATLSIHQLIENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDPRNMM
TACDPRRGRYLTVAGIFRGRMSTKEVDEQMLAIQQKNSNYFVDWIPHNVKVAVCDIPPRG
LKMASTFIGNNTAIQEVFKRIGEQFALMFRRKAFLHWYTGEGMDELEFSEAESNLNDLVS
EYQQYQDATADMDYEEEEVMEEESSIAHSTQVEIKTEVVTETSVSE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagattgttcatctacagatcggacagtgtgggaatcagatcggctcaaagttt
tgggaggtgatcagtgatgaacatggcattaacagagttggagcatacgagggcgacatg
gaccttcagctggagagagtcaatgtttacttcaatgaagcacatggtggaaaatatgtt
ccaagagcactgttagtggacctggagccgggcactatggacagcgtgaggggcagtcag
attggacaactcttcaggcctgataattttatacatggcaattctggagctggcaataac
tgggccaaaggtcactacaccgagggcgcagagcttgtggaacaggttgtggatcgcgtc
cggaatgaagcagagagctgcgactgcatgcaaggcttccagttcgtccactcattaggt
ggcggcactggttcaggaatgggtaccctaattatcaataagatccgagaagaatatcct
gaccgcatcatgaatagcttcagtgtaatgccctcgccgaaggtttccgatacagttgta
gagccatataacgcgaccctatccattcaccaactgatcgagaacacagatgagacgtat
tgtatcgataacgaagcgctgtacgatatttgctttcgcactctaaaactcacaacgcca
acctatggagatctcaaccaccttgtatctctcaccatgagcggggtcactacttccctc
cgcttcccaggccaactcaatgctgaccttcggaagttagctgtcaatatggtgcctttc
ccacgtcttcatttcttcatgcctggtttcgctcctctgacagcacgtggtagccaacaa
taccgagctctaacggtgcccgaactcacccagcagatgttcgacccccgcaacatgatg
accgcatgcgatcctcgtcgaggacgatatctaaccgttgcaggcattttccgcggtcgg
atgtccactaaagaggttgacgaacaaatgctcgccattcagcagaaaaacagcaattat
tttgtggactggattcctcataacgtcaaagtggccgtttgcgacatcccaccacgaggg
ctcaaaatggcctccaccttcatcggaaacaacaccgccatccaggaggttttcaagcgc
atcggagagcagtttgcactgatgtttcgacgcaaggcttttctgcattggtacacaggt
gaaggcatggacgagctggagttcagcgaggccgagagcaacctgaacgatctggtgtca
gaataccagcagtatcaggacgccaccgccgatatggattatgaagaagaggaggtgatg
gaagaggagtcttcaatagcgcacagcactcaagtggagattaagactgaagtggtcact
gaaacttcagtcagtgaatga
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