KEGG   Danio rerio (zebrafish): 558671
Entry
558671            CDS       T01004                                 
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin)
  KO
K24495  myomesin
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    558671 (myom1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:dre04990]
    558671 (myom1a)
Domain-containing proteins not elsewhere classified [BR:dre04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type III domain-containing proteins
   558671 (myom1a)
SSDB
Motif
Pfam: I-set fn3 Ig_3 Ig_DSCAM-DSCAML_C Ig_2 ig V-set Pur_ac_phosph_N Tissue_fac C2-set_2 Adeno_E3_CR1 Ig_CD22 C2-set_3
Other DBs
NCBI-GeneID: 558671
NCBI-ProteinID: NP_001154812
ZFIN: ZDB-GENE-030131-2856
Ensembl: ENSDARG00000061249
UniProt: A0A8M1NUG4
LinkDB
Position
2:30916188..30959913
AA seq 1483 aa
MSESLKLQKEQEERDLETRYESSYHQSSLSSVSRQSYTAYVSSHGHKISGKKKEKKLTPL
SKKEKRSYLAVDKEDEVIGYVVPVFRSSHLATQDLMETQEEVKEEGVGYVVMRNLFARES
GFKMRTVKKTRETSMRESAERMALSQKLHEKEQFQKKMNPDSLTHPPEFIVKPRGQTVWE
GKSVTLHCTVAGWPKPRVAWYKNNVLIDAKARPEKYFTESQYNMHSLEIKNCTFSDTAEY
RISALNVKGESSAFAPVIIKRFKEEEELVERPHGYSPEYGVTFNTTIIDKFDVSFGREGE
TMSLGCTVIVYPTVKRYQPEIVWYRNGVALSSSKWVHMHWSGEKATLTLVHLNKEDEGLY
TLRVNTKSGFDTHSAYVFVRDADVEEEGVPVAPLDVRCHDANKDYVVVTWKQPAVEGSSA
ITGYFIDRLEVGNHHWTQCNDTPVKYARFPVTGLIEGRSYMFRVRALNNAGVSRPSRVSD
PVVAMDPSDRARLRAGPSAPWTGVIKFTEEDPTVGVIPGPPTDLAVTEATKSYVVLSWKP
PVQRGHEGVMYYVEKCLVGTDAWQRVNTGIPVKSPRFALFDLAEDKSYTFRVRSCNSAGV
GEPSEETGATTVGDRLDLPSAPGPVIPIRNTDSSVVVCWGASKEVKDLVGYYIEVTVDGS
GVWAPCNNKPVKGTRFVCHGLNATDKCTFRVKAVNAAGYSGSSAESEACLVKASIAVPSP
PTGVTTLERLRDYMVIGWQAPAKTGGADIRGYYLDYRTVKDGVTSKWHELNLKAVTSSPY
KVTDLKENEFYQFQVRAFNQAGISEASIPTAPLECKEWTVAVPGPPHGLRVQEVRKDSMV
VLWEPPTFNGRSPVTGYYVDFKEENGRWRCVQERSTKHTYMKVSGLQEGISYRLRIHAKN
LAGVGVPSKATDAILAETRPGTNEIVVDVDDNGVISLIFECSDLKEDSQFVWSKNYEAFT
DSSRLTIQTTGGKSRAIFNDPSLDDLGIYSCVVTNTDGVSASYTLTEEGLKRLLDISHDH
QFPIIPFKSEMAIELQEKGRVRFWAEVGKFTSNLQVEYVFNDNVIHEGKKYTMNFNKSTG
IIEMFMDLLEVTDEGTFTFNLVDGKATGRTSLVLIGEEFAELQKKSEFERAEWVRRQGPH
FVEYLSFEVTPECDVHLKCKVGNIKPATEIAWFKDGIEIEEDDEDAKKIGKSDEVLTFDI
GKLVIKSEKAERKKKPATEESPSKPKISKKDAGVYEVKLKDERGKDKTLLNLTDAGYQAV
LNEVFRVIANSSTELKVMSTEHGIILYSFVVHYLEDLRVGWLHKESKISHSDRVQCGVTG
EQLWLKINEPTEKDKGKYAIDIFDGKGSVKRVLDLSGQVWEEAFEEFKRLKAAAIAERNR
ARVVGGLPDVVTIQEGKSLNLTGNVWGDPAPEVSWIKNEKPLVCDEHHTLKYEHSKFASI
TIAAVTTTDSGKYALLVKNKYGTEAAEFTVSVYIPEDEAEKKE
NT seq 4452 nt   +upstreamnt  +downstreamnt
atgtcagaatccttaaaactacaaaaggaacaggaggaacgggaccttgagacgcgctat
gagagcagctatcaccaaagctccctgtcatctgttagccgccagtcatacactgcttat
gtgagcagccatgggcacaagatctcagggaagaagaaggagaagaaactgactccactc
tccaaaaaagaaaagcgctcatacctggcggtggacaaagaagacgaggtcattggatac
gttgtgccagtcttcagaagcagtcatttggctacccaagacctgatggagactcaggag
gaggtaaaggaagagggtgtggggtatgtcgtcatgagaaacctgttcgccagagagtcc
ggcttcaagatgagaactgtgaagaagaccagagagaccagcatgagagagtctgcagaa
cgcatggctctgagccaaaagctgcatgagaaagagcaattccaaaagaagatgaatcca
gacagtttgactcaccctccagagtttatcgttaaaccacgtggtcagaccgtgtgggag
gggaagagtgtgacgctgcactgcactgttgcaggatggcccaaaccccgcgtggcctgg
tacaaaaacaatgttctaatcgatgccaaggctcgccctgagaaatacttcacagagagc
caatacaacatgcactctttggaaataaaaaattgtacttttagtgacactgctgagtac
cgaatctctgcactcaatgtgaagggagaaagttctgcttttgctcctgtcattattaaa
agattcaaggaagaagaggagttggttgaaaggccccatggttatagccctgaatatggt
gtgaccttcaacactaccatcattgacaagtttgatgtttcctttggccgtgagggagaa
accatgagtttgggatgtacagtcattgtctatcccacagtgaagcgctaccagccagag
attgtgtggtacagaaatggtgtcgccttatcatcttctaagtgggtgcacatgcactgg
agtggtgaaaaagccactttgacccttgtccatctgaacaaagaagatgagggtctctac
accctgcgtgttaacaccaagtctggctttgacacccactctgcctatgtgtttgtcaga
gatgctgatgtagaggaggaaggggttccagtcgctcctcttgatgtgcgctgtcatgac
gctaataaagactatgtggttgtcacctggaagcagccagcagtggagggcagcagtgcc
atcacgggttacttcattgacaggttggaggttggcaatcatcactggactcagtgcaat
gacactccagtaaaatatgcccgttttcctgtcactgggcttattgaaggacgctcctac
atgtttcgggtgcgagctctcaataatgctggtgtgagccgtccgtctcgggtctctgac
cctgtagtcgccatggacccatcagaccgggcccgtcttagagctggtccctcagctcca
tggacgggagtgatcaaattcactgaggaagatcccacagttggggtcatccctggtcca
cctactgacctggccgtcactgaggctacaaagagttacgtagtcctgagctggaagcca
cctgttcagagaggacacgagggtgtcatgtattacgtggagaagtgtttggttggtaca
gatgcatggcaaagggtaaacaccgggattccagtcaagtcccctcgctttgccctgttt
gacctcgctgaggacaaatcctacactttccgtgtacgcagctgtaactctgctggagtt
ggagagccgtcagaggaaactggggcgactactgtgggagaccgattggacctgccttct
gccccaggcccggtcattcccatccgaaacactgactcttctgtggtggtgtgctgggga
gcatctaaagaggtgaaggatctggtgggttactatattgaggtcactgtggatggcagt
ggtgtgtgggctccctgcaacaataagccagtcaaaggcacgaggtttgtgtgccatggg
ctgaatgccactgataaatgcacctttcgggtgaaggcagtgaatgctgcaggatacagt
ggaagcagtgccgaatctgaggcttgccttgttaaagcgagtattgctgtcccaagtcct
cccactggtgtgaccacgctggaaaggcttcgggattacatggtgattggttggcaagct
cctgctaaaaccggtggagcagatatcagaggttactatctggactacagaacggtgaaa
gatggagtcacaagcaagtggcatgaactgaacctgaaagcagtcactagctcaccttac
aaggtaaccgatttgaaggaaaacgaattctaccagttccaagtgcgtgcattcaatcag
gctggtattagtgaagcctccatacccactgccccattggagtgcaaggaatggaccgtt
gctgttccaggtcctcctcatggcctccgtgtccaggaagtgcgtaaagattccatggtt
gttctctgggaacctcctacattcaatggtcgcagtcctgtgacgggatattatgtggac
tttaaggaagaaaatggcagatggagatgcgtccaagagagatctacaaaacacacttat
atgaaggtatcaggtctccaagagggcatctcctacaggctgcgcatccatgctaagaat
ctggcaggtgtaggtgtgccctcaaaggcaacggatgcaattttggctgagacccgtcct
ggaaccaatgagattgtagtggatgtggatgacaacggtgtgatttcactgatctttgag
tgctctgatcttaaagaggactctcagtttgtgtggtctaagaactacgaggccttcact
gacagctcaagactcaccatacagactactgggggcaagtccagagccatatttaatgac
ccatcattggatgacttgggcatttactcttgtgtggtgaccaacactgatggtgtctcc
gccagctacacgctcactgaggaaggactgaagcgcctgttggatatcagccatgatcac
cagttccccataattcctttcaaaagtgaaatggccattgagctgcaggagaagggccgt
gtgcgtttctgggctgaagttggcaagttcacttctaaccttcaagtggaatatgtcttc
aatgataatgtcatccatgaaggaaagaagtacacaatgaactttaacaagagcactggc
atcattgagatgtttatggatttactggaggtcacagatgaaggaaccttcacattcaac
cttgttgatggcaaagcaactggtcgtaccagcttagtgctcattggagaagagtttgct
gagcttcagaagaaatctgagtttgagagagcagagtgggtcagaaggcaaggtcctcat
ttcgttgagtatctcagtttcgaggtaacaccagaatgtgatgtgcacctgaaatgcaag
gttggaaacatcaagcctgccactgagatcgcttggtttaaggatggaattgaaattgaa
gaggatgatgaggatgctaagaagatcggaaaatcagatgaagtcttgacctttgacatt
ggcaagcttgttattaagagcgaaaaggcagagcggaaaaagaaacctgcaacagaagaa
agtccaagcaagccaaaaatttcaaagaaagatgcaggagtgtacgaggttaaactgaag
gatgaaagaggaaaggacaaaactttgctgaacctgacagatgcaggttatcaagcagtg
ctgaatgaagtgttcagagttatagcaaactcttccaccgagctcaaggttatgagcaca
gaacacggaatcattctctactcatttgttgtgcactatcttgaagatctccgtgtaggc
tggcttcacaaagaatcaaagatctcccactcagacagagtccagtgtggtgtcaccgga
gaacagctgtggctcaaaattaacgagcccaccgagaaggataagggcaaatatgccatt
gatatcttcgacggcaaaggcagcgtcaagagagttcttgacctatcaggacaagtatgg
gaggaagcatttgaagaattcaaaaggctgaaggcggcggccatagcagagagaaaccgg
gcacgtgttgtgggtggcctgccagatgttgtcaccattcaggagggcaagtccctcaac
ctcactggcaacgtatggggtgatcctgctcctgaggtcagctggatcaagaatgaaaaa
ccgctggtgtgtgatgagcaccacacgctgaagtatgagcacagcaagtttgccagcatc
accatcgctgctgtcaccacaaccgactcagggaaatacgccctgctggtgaagaacaag
tacggcacagaagcggcagagtttactgtcagtgtctacatcccagaggatgaagccgag
aagaaggagtaa

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