Danio rerio (zebrafish): 558883
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Entry
558883 CDS
T01004
Symbol
tprB
Name
(RefSeq) translocated promoter region b, nuclear basket protein
KO
K09291
nucleoprotein TPR
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
558883 (tprB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
558883 (tprB)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
558883 (tprB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Nucleoprot-TPR
TPR
Motif
Other DBs
NCBI-GeneID:
558883
NCBI-ProteinID:
NP_001025294
ZFIN:
ZDB-GENE-030131-6410
Ensembl:
ENSDARG00000016630
UniProt:
Q5RI09
LinkDB
All DBs
Position
20:complement(37312367..37343025)
Genome browser
AA seq
2352 aa
AA seq
DB search
MAAVLQQILERSEISKLQKTVLTKLEKYISEQQCEVDDLKAQQEQFRVDSEQQYFDIEKK
FAESQAQFVSQTQEHQILKEEHYKLEDELKCLRENNKEQAASYAKLESKQNDLSKAKDEL
EAEKRELVRTLERRSQEMEHQSEDLKRLNDRLVEVSAEKMQLQLKLEESETSEVSIKYKE
KRMEQEKDLLQSQVTWLNTELKAKSEELLSLSRQRGNEILELQCNLNNKEDEITRLQDQV
TSLKASNETFQKQAEEMIIKMREAKEQQAALEEKFSNELNANIKLSNLYKGAAADAEAKS
EELSRAVDELHKLLKEAGEAHKDLEVKMADLESHKNKEIAELKEKISSQEKELDNANDLL
SDSRHRGAASILTEEQVTIMSPTAAAVAKMIKPGMKLTEIYTAYVETQEHLQREKLENKR
LHKYLDDIVQEMEAKAPILKRQREEYERMQKSVSSLSAKLEQAVTEVHRLQKESDESNKR
ASVLERDNQRFEVQLADMAQQVRVLLVELEEARGNHVMREDDDVGSADVSSTSEVISQHL
VTFRSVEELQQQNQRLLVALRDLSEEKEKDELEGDTMKRSEVEKYLEELQRELEQLKEKR
TQDLQKVDTVARQRDMFRMLLTQTTGVTFPQGAGAEELMLTSTPRRSPAVTPTTGTPTAL
VATAIESTESVEAKAALKQLQEVFVAYKKEKIESEKAQIEQNEKLQDQVTELRSENMKIS
TQLEFTSKRYEMLQDNVEGYRKDIASLNEKLQKQAAAIQQSEQTTHTLTQDLQAAAEKLS
IAESELENLRKERDMLKLVEIRLTQEKESFQAQQLGQNMLLTNLKSIQTTLERSETETRQ
RLTAQIEKQEREITQLQKRLENEVEQKHLLARNQDVQLMDTKKQLEAQIAQHHKTKEQLS
AAQLELTNLRLQLNSGESRLASAAVHTGLQGSERDMEVLRAQIRQTENRIEELTERLKNT
TASMEQYKAMSLSLEESLDKEKQVTEQVRSSVENQVEAAQEQYKRLEQKLLEMDKEKQNL
LEEKNKAVAAVEQELTELRKSLSSVQAELQSAQEKAAVAAAQEQQALLDGQEQAKMAAEA
QDKYEREMLLHAADVEALQAAKAQAQQASLVRQQLEEKVQITSAQLLEARVSWEEQEKIL
KEEQCKIQSRCENLQRQNKLLHEQIQTLSGQMASQLKRATTESPLNVSLTEEGKSQEQLL
EILRFVRREKEIAESRFEVVQGESLRHRLRVEHLERELKDMQESLNAERERMQVTAKTLA
QHDELMKKTETMNVLMETNKMLREEKEKLEKELQDTQAKIRKLESDIMPVQESNSELSEK
SGMLQAEKKLLEEDIKRWKARTQHLVSQQKDTDPEEYKRLHSEREAHLKRIQQLVEETGR
LKADAARSSGSLTTLQSQVQNLRENLGKVMVERDNLKKDQEAKILDIQEKIKTITQVKKI
GRRYKTQYEELKVEYEKLVAAAASAPAQDQEAQQASAQELQNLKESLNQSETRIRELEGQ
LENLNRTVGEREMEARSAQEQASRLQTELTRLRQELQEKSSQEERLKQQLTEKEERTKKA
ILLAKQKISQLTGIKGQFQKENEELKQQKEELEVRVSALKSQYEGRLSRQERELRDLREQ
QERHGEQRDEPQEQGSSKTQEPQRTTEQRQISLKTTPAAERGSASTSEPPTANIKPTPLA
ATPSKPQVIPGNKSTPRASIKPMITPAPVPTPTPTATVMPTTQVESQEPMQSSESPLEHV
TVYGSASGSVRSTSPNVQTTLAQPLLNVQQQNQATAFIQPTQQQTQPPAEPSNQEPPAAL
MLPTSQLDRPLSTSTGLWSATPSTSSASAVSASPGSALSKRPREEEQESMSADTQSQDEP
NDSPTCKRLRIHRVGLEEEMLAEDSTEAESVVPGEIQEAPDAGQELENYSTLEEMDEEPG
PSQSVPGDRMLPHPSETHRSPEEPDHHVIVIVSDTESEGEQEEESEEEEEEEEEEQDYEE
EDEEEEEEDDDDDEEDGGIGEEGDESNEESRDDNEAYEGDDTEGPDPTDPGTETEESLGA
TDSTQRMADSQSFESNTLEMFEVPVTSSAPRPPQSPRRPQHPLPPRLNILAAPAQELGPP
AQVQRLPARRQSVGRGLQLASGMASSAQPFFEDDDRMVPSTPTLPLRSDGFAEAIHSPQV
AGVPRFRFGLLDELPQTSSSHSDLSQLPSQGLGMYESSVFLGSHEDESGGRSVPTTPLQI
SAPVTILSEAAVSEASEHASQSVPMVSTSTPGLSAPAVEERDDMFLDAGDSAEASLEAVS
QTEAEEAAQPSDDANLPSTSQEPSSSSADTSSSQPPKARSGSGRQWTGSRGSRSIVKRDG
LSVMGVRGRFAR
NT seq
7059 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgttgcagcagatacttgagcggtcggagatatcgaaactccaaaaaaca
gttttgactaaattagagaagtacatttctgagcagcaatgtgaagttgatgacctcaag
gcacaacaggagcaatttcgtgtggatagcgaacaacagtattttgacatcgagaaaaag
ttcgcagagagtcaggctcagtttgtgtcccagactcaagaacatcagatcctgaaagag
gagcactataaattggaggatgagctgaaatgtttaagagagaacaataaggagcaagca
gcttcatacgccaaactagaatctaaacagaatgacctttccaaagccaaagatgagctc
gaagcagaaaaaagagagctggtccgtacactggaaagaagatctcaggagatggaacac
caaagcgaggaccttaagcgtcttaatgatcgattggtggaagtcagtgcagaaaaaatg
cagcttcagctcaaactggaggagtcagaaacctctgaagtttcaatcaagtataaggaa
aaacgaatggagcaggagaaagatctactccagtctcaagtgacctggctgaacactgaa
cttaaagccaaaagtgaagaactgctgtctctgtcccggcagagaggcaatgagatcttg
gagctccagtgtaaccttaataacaaggaggacgagatcacccgccttcaagatcaggtg
accagtctgaaggcgtccaatgagacctttcagaagcaagcagaggagatgatcattaag
atgagagaggcaaaagaacagcaagctgctttggaagaaaagttcagtaatgagctcaat
gccaacattaagctctcaaatctgtacaagggagcagcagctgatgctgaggccaagagt
gaagagctcagcagagccgttgatgagcttcataagctgcttaaagaggctggagaggca
cataaagatctggaagtgaagatggcagatctggaaagtcataagaataaggaaattgct
gaacttaaagagaaaataagcagccaagaaaaagagctggacaatgccaacgacctgttg
tctgacagcagacacagaggagctgcttcaattcttacagaagagcaggtgaccataatg
tcccccactgctgctgcagttgccaaaatgatcaaaccaggcatgaaactcacagagatc
tataccgcatacgttgagacccaagagcatttacagcgtgaaaaactcgagaacaagcga
ctgcacaagtacctggatgacattgtgcaggaaatggaagcaaaggctcctatactgaaa
agacagagagaagagtacgagcgcatgcagaaatcagtttccagtctctctgctaaatta
gagcaagctgtcacggaggtacatcgcttgcaaaaagaatcggatgaaagcaacaagcgt
gcatcagttttggaaagagataaccagaggtttgaggttcagctggctgacatggctcaa
caggtgcgagttcttctcgttgagctggaggaagcacgtggtaaccatgttatgcgggag
gatgatgatgtgggttcggcagatgtgagcagcacatcggaggttatttctcagcacctg
gtcactttccgtagcgttgaagagctgcagcagcagaaccagcgactcctagtggcgctc
agagaccttagtgaggaaaaggagaaggatgaattggagggagacaccatgaaacgcagt
gaagtggaaaaatatctcgaggagcttcagcgagagttggagcagctgaaggaaaagaga
actcaagatctgcagaaggttgacactgtggcacggcagagggacatgttccgcatgctt
ctgactcagactactggggtcactttcccgcagggtgctggagctgaggagcttatgctg
acctctacgccccgtcgttctccagccgttacacccaccactggcacccctacagcactg
gttgccacagccatagaatccactgagtcagttgaggccaaggctgcactgaagcagctt
caggaggtctttgtggcctataagaaagagaaaattgagtctgaaaaggcacaaattgag
caaaatgagaaactgcaggatcaagttaccgaacttcgctcggagaacatgaagatctcc
acacagctagagttcacgtccaaaagatatgagatgctccaggataatgttgagggctat
cgtaaggatattgcctctctgaatgagaagcttcagaaacaggctgcagcaattcagcag
agtgaacaaaccacacacaccctcacacaggacctacaagcagcagctgagaagctctcc
attgctgagtctgaattggagaacctgcgtaaagagagggacatgttgaagctagttgag
atcaggctgacccaggagaaagagtccttccaggcccaacagcttggccaaaatatgctg
ctgaccaacctcaaatcaatacagactactctagagcgctctgagacggagacaagacaa
cggctgactgctcagattgaaaagcaggagagagagatcacccagctccagaagagactt
gagaatgaggtggagcagaagcacctgctggcacggaatcaagatgtgcagctgatggac
actaagaagcagctggaagcacagattgctcagcaccacaagacgaaagaacagctcagt
gctgcacagcttgagttaaccaacttgagattgcagttgaatagcggggagagccggctg
gcgtccgctgcagtacatacaggtctgcagggcagtgagagggacatggaggttctgcgt
gcccagataaggcagactgagaacagaattgaagaactgacagagcgacttaaaaacact
actgccagtatggagcaatacaaggctatgagtcttagcctggaggagtctctagataag
gagaagcaggtaactgagcaagttcgttcatctgtagaaaaccaagtggaggcagctcag
gagcagtataaacggctagagcagaaactgctggaaatggacaaggagaaacagaacttg
ctggaagagaaaaacaaagctgttgctgctgtagagcaagagctaacggagctgagaaag
tctctcagcagtgtgcaggcagagctccagagtgcccaggagaaagcagctgtggctgcg
gcacaggagcagcaggccttactggatggtcaggagcaggctaagatggcagctgaggca
caagataaatatgagagggagatgttactgcatgcggcagatgtggaggcactgcaggct
gccaaagctcaggctcaacaggcttctcttgtcagacagcagctggaggagaaagtacag
atcaccagcgctcaactgctagaggctcgtgtgtcatgggaggaacaagagaagattctt
aaggaggagcagtgtaagatccagtcccgctgtgaaaatctgcagaggcagaacaaactc
ctccatgagcagatccagactctgagtggacagatggcaagtcagctgaagcgagccacc
actgagagtccactcaacgtctccctgactgaagaaggaaagtctcaggagcaacttctt
gaaatactcagatttgtgcgcagagagaaggagatcgcagagtctcggttcgaggttgtc
cagggggagagtctgaggcacaggctcagagtggagcatctggagagagagctgaaggat
atgcaagagagtctaaatgcagagagagagaggatgcaggtgactgcaaagactctagcc
cagcacgatgagctgatgaagaaaactgagaccatgaatgtcctgatggagaccaataag
atgctgagagaggagaaggaaaaactggagaaggagttgcaggatactcaagccaagata
cgtaaactagagtccgacatcatgccggtgcaggagtccaattcagagctgagtgagaag
agtggcatgcttcaggcagagaagaaacttctggaagaagacatcaaacgctggaaagct
cgcactcagcacctggtgagccagcaaaaagacactgacccggaagagtacaagcgtctg
cactctgagcgggaagcacatcttaaacgcatccagcaacttgttgaagaaaccggccga
ctaaaagctgatgctgccaggagcagtggctctttgactactctgcagtctcaagtgcag
aacctaagggagaacctcggaaaggtgatggtggagagggacaacctgaagaaagaccag
gaggccaaaatactggacatccaggagaaaataaaaaccatcacacaagttaaaaaaatt
ggtcgtcggtataaaacacaatatgaggagctcaaggttgaatatgaaaagttggtagca
gcggcggcatctgcaccagcccaggatcaggaggcacagcaggcatcagctcaagaactt
cagaatcttaaagagtccctcaatcaatcagagaccaggataagagaactggaaggccaa
ctagagaatctcaatagaactgtaggagagcgagaaatggaggcccgcagtgcgcaggaa
caagcctctcgtttgcagacagagttaacgcgtctcagacaagagcttcaggagaaatca
tctcaggaggagcgtctcaaacagcagctgactgaaaaggaggagaggaccaagaaggcc
atattattggccaagcagaagatcagtcaacttactggtataaaaggacagtttcagaag
gagaacgaggagctgaagcaacaaaaagaggagttggaagtgcgtgtgagtgcgctgaag
tctcagtatgaggggcgtctgagcagacaggaaagggagctacgagaccttcgcgaacag
caggagagacatggagaacagagggatgaaccacaagagcagggctccagcaagacccag
gaaccacaaaggacaacagaacagcgacagatttctctgaagacaaccccagcggcagaa
agaggaagtgctagcacttctgagcccccaacagccaacataaagcccacacctctggca
gcaacccccagcaagcctcaagtcattcctggaaacaaatccactccaagagccagcatc
aaacccatgatcactcctgccccggtgcccactcctacacccactgccacagtcatgccc
accacacaggtggaaagccaagagcccatgcagtcctcagagtccccattggagcatgtg
actgtgtatggcagtgccagtggttcagtaaggtccacgagccctaatgttcagaccacc
ctggctcagcctctgctgaacgttcaacagcagaaccaagctactgcattcatccagccc
acccaacaacaaacccaaccccctgctgaaccctccaatcaggagcccccagctgctcta
atgctgccaacctcacagttagataggcctctttctacatccacagggctctggagcgcc
acccctagcacaagcagtgccagtgcagtttctgcatctcctggtagtgccttaagcaag
cgcccccgtgaagaggaacaagagagcatgtctgctgacacacagtcccaagatgagccc
aatgactctcccacttgcaaaaggctccgaatccatagagtggggttggaggaagagatg
ttggctgaggacagcactgaggctgaaagcgttgtaccgggtgagatccaggaggctcct
gatgctggacaggagctggagaactactctactctggaagaaatggatgaggaaccagga
ccatctcagtctgtccctggagatcgaatgctgccccatccatctgagacccatcgaagc
ccagaggagcccgatcaccacgtcatagtcattgttagtgacaccgagagcgaaggagaa
caggaagaggagtctgaggaggaggaggaggaagaggaagaagagcaggattatgaggag
gaggatgaggaagaggaggaagaagatgatgatgatgatgaagaggatggagggattggg
gaagagggagatgaaagcaatgaggagagtagagacgacaatgaggcctacgaaggagat
gacacagagggccctgatcccactgatccgggcactgagacagaagaaagtcttggagcg
acagactccactcagcgcatggcagattcccagagctttgaatcgaacacattggaaatg
tttgaagtccccgtcaccagctccgcccctcgacctccacaatcccccagaaggcctcag
catcctctgccacctcggctaaacattttggctgctcctgctcaggaactcgggcctcct
gctcaagtacagcgtcttccagctcgccggcagtcagtgggacgaggccttcagcttgct
tctggaatggccagtagtgcacagcctttctttgaggatgatgacaggatggttcccagc
actcctacacttcctcttcgctctgatggatttgcagaagccatacattctccacaggtg
gcaggtgtaccacgctttcgattcgggcttttagatgagctcccgcagaccagctcctct
cactcagacctcagtcagctgccctcacaaggtttaggcatgtatgagagctctgttttt
ttgggatctcatgaggatgagtcagggggacgcagtgtacccacaacccctctgcagatc
agcgctcctgtgacaattctctcagaggctgctgtatctgaagcgagtgaacatgcttct
cagtctgtgccgatggtgagcacctctaccccaggcctcagtgctccagcagtggaggag
agagacgacatgttcctggatgcaggagacagtgctgaagcttcacttgaggccgtgtct
cagactgaggcagaagaagcagcgcagccttcagatgatgcaaatctgccttcaacaagc
caggaaccatcatctagttcagcagacacaagcagctctcagcctcctaaagccaggagc
ggctctggcagacagtggactggtagtcgaggttctagaagcattgtgaagagggatgga
ctgagtgttatgggtgtgagaggacgctttgccagatga
DBGET
integrated database retrieval system
