Danio rerio (zebrafish): 558937
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Entry
558937 CDS
T01004
Symbol
dhx32b
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
558937 (dhx32b)
Enzymes [BR:
dre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
558937 (dhx32b)
Spliceosome [BR:
dre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
558937 (dhx32b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
558937
NCBI-ProteinID:
XP_073784763
ZFIN:
ZDB-GENE-130613-5
Ensembl:
ENSDARG00000079029
LinkDB
All DBs
Position
17:34047585..34063768
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AA seq
729 aa
AA seq
DB search
MEMELSTDVEELSETTESQDIDSDDLLELNQFDGLPFSSRYYKLLRERKCLPVWEAKCEF
MDSLINSQIVIVTGTAKTGQSTQIPQWCAEFCLSAQYQNGMVVCTQIHHQTTVELALRVA
DEMDVNIGNEVGYSIPLQACCSQDTVLRYCTDDVLLREMMSDPLLEQCGVVVLDQAQERT
VSTDLLLGLLKDVLLTRPELRLVILSAPHSSEKLLRHYGSVPQIKLEGPQPCEVLFGSGR
GGVKDYLCSALRLALEIHQNENHGDIVAFLATEQEIECAHAILRREGANLALSHGELVPV
SLCPRQGDSLSLTEESKSRRVFLTCSPSEDLFWALHTIRFVIDAGVQKRYVYNPRIRANS
IVIRPISKSQAESRKQLAGPTGKCFCLYQEDTSLPAESVPHLLESDITSTVLFLKRMEIA
GLSHCDFIDRPDPEGLMQALEELDYLAALDDDGNLSEIGIIMSEFPLEPQMAKTLLASCE
FDCVCEVLTIAAMLTAPSCFIIPPVEMRQKALLCHQKFQHAEGDHFTLINIFNAYRYAKD
GSYSKVEQWCDEHFLSLAALQTADAIRSELTEILKRLELPVSLPAFGSRSNSLNVRRALL
AGFFMQVARDIDGSGNYFMLTHKHVAQIHPLSGYGLEVNKKNLPEWVLYHEHTLSENNCI
KTVSQISAIEFIQMAPQYFFYNLPPSESKDLLQHTIDHGTAAPSKGKRKCQNSSSAATEE
QTPERCTIQ
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggagctatcaacagatgtggaggaactatcagaaaccactgaaagtcaagac
attgattcggacgacctgctggagttgaatcagttcgacggactgccattttcttcaaga
tattacaaattattaagagaaagaaagtgtttgccggtgtgggaagcgaaatgcgagttt
atggacagcttgatcaacagccagattgtgatcgtcacaggcacagctaaaacaggacaa
agcactcagatccctcagtggtgtgcagagttttgcctgtctgcgcagtatcagaacggc
atggtggtgtgcactcagattcaccatcagacaactgtggagctggccctgcgtgtagcc
gacgagatggatgtgaacatcggcaatgaggttggatatagcatcccgcttcaggcctgc
tgctcccaagacactgtactcagatactgcacagatgacgtgctgctccgggaaatgatg
tcagaccctctgttggagcagtgtggtgtggtggtcctcgatcaggcccaagaacgcacc
gtcagcacagacctgcttctcggactgctcaaagacgtgctcctgacgcggccagagctc
cggctggtcatcctcagcgctccgcactcctcagagaagctgctgagacactatggaagt
gttcctcagatcaagctggaaggaccacagccatgcgaagtgctgtttggtagtgggaga
ggaggagtgaaggattacctctgctctgctcttagactcgctctggagatacaccagaat
gaaaaccatggagacattgtggcatttctggcaactgagcaagagattgaatgtgcccat
gccattttgcggagagagggtgccaatctcgctctgtctcatggagagctggtgcccgtg
tctctgtgcccaaggcaaggtgacagtctctcactgactgaggagagcaaaagcaggaga
gtcttcctcacctgcagccccagcgaagatctcttctgggcccttcacaccattcgcttt
gtgattgatgctggagtgcagaaaagatatgtgtacaatccccgaatcagagccaactca
attgtaattcgaccaatcagcaagagccaagctgagagccgcaaacaactcgcaggccca
acaggcaagtgcttctgtttgtatcaagaagacacttcacttcctgccgagagcgtccca
caccttctagagtctgacatcacttccactgtgcttttcctaaagcgcatggaaatagct
ggtttgagccactgtgacttcattgacagaccagatcctgaaggcctcatgcaagcttta
gaggaactggactatctcgccgcactggatgatgacggaaatctgtccgagattggaatt
atcatgtcagagtttcctctggagccacagatggctaagactttgcttgcgtcctgtgaa
tttgactgtgtgtgtgaagtgctgaccatcgctgccatgctaacagctccaagctgcttc
attataccccctgtggaaatgagacagaaggccttactgtgtcatcagaagttccagcat
gccgagggagatcatttcactcttattaatatcttcaatgcctacagatatgcaaaggat
ggatcatactctaaagtggagcagtggtgtgatgagcatttcctaagtctggctgctctt
cagacggcagatgccatacgctctgagctaacagaaatcctgaaacgcctagagctgcct
gtgtccttacccgcctttggttctagaagcaacagcttaaatgtcagacgtgccctacta
gctggattcttcatgcaggtggcgagggacatcgacgggtcagggaattacttcatgtta
acccataagcatgtggctcagatccaccctctgtccggctatggacttgaggtgaacaag
aagaacctgcctgaatgggttctgtaccatgagcacacgctgtcagagaacaactgtatc
aaaaccgtgtctcagatctcagcgatcgagttcattcagatggcaccgcagtacttcttt
tacaacctgccacctagtgaaagtaaagacctactgcagcacactatagatcatggtact
gctgctccatctaaaggcaaaagaaaatgccagaactccagcagtgctgccactgaagag
cagacccccgagcgctgcactatacagtaa
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