Danio rerio (zebrafish): 558958
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Entry
558958 CDS
T01004
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3
KO
K06247
laminin, gamma 3
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04510
Focal adhesion
dre04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
558958 (lamc3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
558958 (lamc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
EIIA-man
Motif
Other DBs
NCBI-GeneID:
558958
NCBI-ProteinID:
XP_687343
ZFIN:
ZDB-GENE-060531-121
Ensembl:
ENSDARG00000093572
UniProt:
F1QPJ1
LinkDB
All DBs
Position
5:34407365..34543314
Genome browser
AA seq
1643 aa
AA seq
DB search
MDSSALHSLLLLLFASVYFVFAGMDSCYDENGVPSLCLPKFENAAFNHSVMVSNMCGIPP
EDYCMQTGSTRSCHHCDAFDSELNRNATYLTDFHTDEEPTWWQSQSMFYGVQYPNSVNIT
LHLGKAFEITYVRLKFYTSRPESFAIYKRTDENGPWQPYQYYSASCRKTYGRDNKGFIRP
GDNERTPLCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSLVLQDWVTATDILISLDRL
NTFGDEFFKDAKVLRSYFYAISDFSVGGRCKCNGHASECVVNEEGRSVCVCEHNTAGVDC
QLCAPFYQDRPWARATAHSANECVRCNCSGLADECVFDVEQYRSTGQGGRCLGCRENTAG
PHCEQCRENYFRSSALQPCQNCNCNALGSVSLQCDADGVCVCWPSVSGVKCDICKSGFHS
LGPGGCRLCDCDERGSVGVCSAEDGRCHCKANVEGQSCNRCKPGSFNLQLENPDGCNKCF
CFGHSLACFSSNQYTPIYITSDFLEDPDGWKGVFSRAHEQSLIWKEGEVYLLPYREENGF
YKAPDKYLGNMLLSYGRTLSMSFTAELEELLPRSVTVRLEGSGMSVSADLHTQQEPYSQL
EKTPINSFSLRLTEKHVNPSVSSFEFLRMLYNLTALHISNAGGQNYTSQLSRVSLESAVQ
KAYHPDVLPHALWVEVCSCPAGFAGQFCQLCAPGFTRETPDGGPFSPCVPCNCNQHGTCH
PETGVCACTDFTTGRHCERCEDGYYGNALTGSPGDCLPCPCPDRTTCAQVPETGDVICTN
CPTGQRGVRCELCEDGFYGNPLGWGGTVQPCVKCQCNGNVDANAVGVCDHMTGRCLKCLG
HTTGDHCEKCRLGYYGNALANQLNPERKCKPCACNVAGTSGSPNDCHPNTGNCVCLGHVT
GRDCGQCEAGYFNLQPGLGCEMCNCNPIGSLSSACHPITGQCMCRTGVEGMSCDTCRMGF
FGFSSRGCRACNCDPMGSTSMQCHNNGTCSCRNGFVGYKCDKCEQNYYQNRLSHQCEECP
VCYSIIRDQASKLKARLQELELLLSSYDCNRYSRQYRGHQQHRHQHNDLDNHIQKDQVED
YLPNALEDLLAIQEAREAFIKQFSQLETSAQTLQLQLRNIATALNCNLTNFAKHPEEGKT
QKVENECRELVDTLSTALNMQDQLQKMTVELNSMAIPAVIPKEPNKWNAIVNESEVLVKS
HTDMAAHIEQVAEDVFKMANRTYLQLVTLLEDNSTESHIQDLTEKLEEMQQLKENLTLEV
NETLVTHLSLQKHNAEIADILHNITASLSELRRTDGNFTLVVEETNMTSFSQTFNQTNVT
AAQNPQLTESEDLMNRTTNLDISVQSKEHLVNKTREEIQPDMDSAKNNLKTVQELKQLTA
AVEGLKVSAVSSVVTGKEVEAEILSLQKSLQDMEQDWPQLPTLSKSFLKREKMLNEKTLV
EVKKRVKQTEKMIKPSVENATDADSTAKQAEASADTVAKDAKASFTQGKRIKHASGQLRS
ALDVTLEQLSELESQTALKQATLEAEEDMVSSSSVIDSMETAKNQLESFTDMLTLLLSQM
EADVVLENYDRILNETAVRLRVLQGAVESPSLTGKIQRLRNAASDQEKQMQNLEESLQDI
RKERDSLTDIAQNLPKTCPQKGH
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggattcctctgcacttcactctcttttacttctgctttttgccagcgtctactttgtt
tttgctggaatggactcttgttatgatgaaaatggtgtcccgagcttgtgtttacctaaa
tttgaaaatgcggccttcaatcattccgtgatggtttcaaatatgtgcgggatcccacct
gaggactactgcatgcagactgggtccacgcgctcttgtcatcactgtgacgccttcgac
tctgagctaaatcgtaacgccacttacctgacagacttccacacggatgaagagcccacc
tggtggcagagccagtccatgttctatggagttcagtacccgaattcagtcaacatcact
ctgcatcttgggaaggcttttgagatcacctatgtccgtttaaagttctacaccagtcga
ccagagagcttcgccatctacaagcgtacagatgagaatggaccgtggcagccgtaccaa
tattacagcgcttcctgtcgtaagacgtacggaagagacaacaagggcttcatacgtcca
ggtgataacgaaaggacgccactttgcacggatgagtttagtgacatctctccgctgaca
ggcggaaatgtggccttctccacattagagggacgaccaagtgcctacaactttgaccag
agtcttgtgttgcaggactgggtgacagctacggatatcctcatctctctggacagactg
aacacttttggagatgagttcttcaaggatgccaaagtgcttcgctcatatttttatgcc
atttctgatttctctgtggggggcaggtgcaagtgtaatggccatgcaagcgaatgtgtg
gtcaatgaggaaggccgttcggtgtgtgtttgtgagcacaacaccgcaggggtcgactgt
cagctctgtgctcccttctaccaagacagaccttgggcacgagcgactgctcattctgcc
aacgagtgtgtgaggtgtaactgcagtggtcttgccgatgaatgtgtgttcgatgtggaa
cagtaccgcagcacaggacaaggggggcgctgtctcggctgtagggaaaacactgctggt
cctcattgtgagcagtgcagagaaaactacttcagatcatcagcactgcagccctgccaa
aactgtaactgcaatgcattaggctctgtgagtttgcagtgtgatgcggatggagtgtgt
gtttgctggccaagtgtgtctggtgtgaagtgtgacatttgcaagtctggcttccattct
cttggccctggtggatgcaggttgtgtgactgtgatgagaggggcagtgtaggagtgtgt
tcagctgaagacggacgctgccactgcaaagcgaatgtggagggacagtcctgcaacagg
tgtaagccaggatccttcaacctccagctggagaatccagacggctgtaataaatgcttt
tgctttggtcactccctcgcctgtttctcctccaatcagtacacgccaatttatatcact
tcagactttctagaagatccagatggctggaagggtgttttctccagagcccatgaacaa
tctctgatctggaaggagggagaagtctatctgttgccctaccgagaggagaacggcttc
tacaaagcacctgataaatatcttggaaacatgttgctaagttacggacggacccttagc
atgtcatttacagccgagctggaggagctgttgcccagaagtgtgactgtgaggctggag
ggctctgggatgtcagtttctgctgatttacacactcaacaggagccttattcacagctg
gaaaagacacccattaactccttttctctcaggttaacagagaagcacgttaatccatct
gtatcatcatttgagtttctccgcatgctttacaatctgacagctctacatatcagtaat
gcaggaggccagaactacacatctcaactctccagagtaagcctggaatctgcagtccag
aaggcctatcatccagatgtgctccctcatgctctgtgggtggaggtgtgctcctgtccc
gcaggattcgcaggccagttctgtcaactctgtgctcccggattcaccagggagacccct
gatggtggacccttctccccttgtgtaccttgcaattgcaatcagcatgggacctgccac
ccggagacaggtgtgtgtgcctgcacagactttaccaccggccgtcattgtgaacgttgt
gaagatggttactatgggaacgcactgactggcagcccaggcgactgcttaccttgtcct
tgtccagatcgcaccacctgcgcccaggtgccagagacaggggacgttatttgtaccaac
tgtccgacaggccaaaggggtgtacgatgtgaattgtgtgaagacggtttctatggcaac
cctctgggctggggtggcacagtgcaaccctgtgtgaagtgccagtgtaatgggaatgtg
gatgccaatgcagtgggtgtgtgtgatcacatgactggacgctgtctgaaatgtctgggc
catacgactggggaccattgtgaaaaatgcagattgggttactacggcaacgcactggcc
aaccaactcaatccggagcgaaagtgcaaaccttgtgcctgcaacgtggctgggacatca
gggtctccgaatgactgccatccaaatacaggaaactgtgtttgcctgggtcatgtgaca
ggacgagactgtggacaatgcgaggctggatacttcaatctgcagcctggattgggctgt
gagatgtgtaactgcaatcccattggctcattgtcttcagcatgtcatccaatcacagga
cagtgcatgtgtcgaacaggtgtcgaagggatgtcatgtgacacttgccgaatgggattc
tttggtttctcctcaagaggctgcagagcttgtaattgtgaccccatgggctcgacctca
atgcagtgccacaacaacgggacgtgttcttgtcgcaacgggtttgttggttataagtgt
gacaagtgtgaacagaactactaccagaaccgcctgagccaccaatgcgaggagtgtcct
gtgtgctacagcatcattagagaccaggccagtaaactgaaagctagactgcaggagttg
gagttgctgctcagtagttatgactgcaatagatacagccggcagtatcgtgggcaccag
cagcacagacaccaacataatgacctggataatcacatacagaaggaccaggttgaagac
tacctgcccaatgctcttgaggatctccttgctattcaagaggctcgtgaagccttcata
aagcagttctcacagctggaaacatctgcccagaccttacagctgcagctgcgaaacatt
gcaacagccctgaactgcaaccttaccaactttgcgaagcatccagaggaaggaaagact
caaaaggttgaaaatgagtgtcgagagcttgttgacactttatcgaccgctctgaatatg
caggatcagcttcaaaagatgactgttgaacttaacagcatggccatcccagctgtaatc
cctaaagaacccaacaaatggaatgccatagtgaatgaatctgaggttctggtgaaaagt
cacacggatatggcggctcatatagagcaggtagcagaagatgtctttaaaatggctaac
agaacctatttgcagctggtaactcttctagaggacaactccacagagtctcacatacag
gatctcacagagaagctggaggagatgcagcagctgaaggagaatctgactcttgaggtt
aatgagacattagtgacacacctgtcacttcagaaacacaacgcagagatagcggacatt
ttacacaacatcactgcttcactgtcagaactacgcagaacggatggcaatttcaccctt
gttgtggaggagaccaacatgacctctttctcacagacgtttaatcaaaccaatgtcaca
gcagctcagaatcctcaacttacagagagtgaagacctgatgaacagaacaaccaattta
gacatttctgttcagtccaaggagcatttggtaaataagaccagagaagaaatccagccg
gatatggacagtgccaaaaataacctgaaaactgttcaagagctgaagcagttgacggct
gcggtggagggattgaaggtgtcagccgtctcctctgtggtgactgggaaagaggtggag
gcggagattctgtctctgcaaaagagtctgcaagacatggagcaggactggcctcaactg
cccacgctcagcaaaagctttctgaagagagagaagatgctgaacgagaagacactggtg
gaggtgaaaaaaagagtgaagcagacagagaagatgatcaagccctcagtggagaatgcg
acagatgcagacagtacagctaaacaggccgaggcgtcggcagacacggtggctaaagat
gccaaagcctccttcacgcaggggaaacggataaaacatgcatctggacagttgcgttca
gctctagacgtcaccctggagcagttgtctgagctggagagccaaaccgcactgaaacag
gcaacattggaagcagaggaggacatggtttcttcaagcagtgtgatagacagcatggag
acggccaagaatcagctggagtccttcacagacatgctcactctgcttctcagtcaaatg
gaagctgatgtggttctggagaactacgatcgcatcctaaatgagacagcagtgcgtctt
cgtgtcctccagggggccgtggagagtccgtctctcaccgggaagatccagaggcttcgc
aacgccgcgtctgatcaagagaagcagatgcaaaatcttgaagagagcctgcaggacata
cgaaaggaaagagacagtctaacagacatcgcccagaacctgcccaaaacatgcccacaa
aaaggccactga
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integrated database retrieval system