Danio rerio (zebrafish): 559074
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Entry
559074 CDS
T01004
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
559074 (lingo4b)
Membrane trafficking [BR:
dre04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
559074 (lingo4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_1
Ig_3
ig
LRRNT
LRR_EndoS
V-set
Ig_2
LRR_9
LRR_Zer-1
LRR_RPS2
Ig_PDGFR_d4
LRR_6
C2-set_2
Ig_C17orf99
C2-set_3
Motif
Other DBs
NCBI-GeneID:
559074
NCBI-ProteinID:
XP_021322384
ZFIN:
ZDB-GENE-091214-3
Ensembl:
ENSDARG00000078527
UniProt:
A3KH16
LinkDB
All DBs
Position
16:complement(32594112..32620165)
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AA seq
604 aa
AA seq
DB search
MFLDLCGQRGAWTVLLLWCLNLSAADLPCPQRCSCSRDPLEVNCSSRHLTAVPEGLPTNA
KRLDLSGNQLKTLARRQFSSLSKLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKI
LPVGVFSGLSNLRRLDISENEILVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQAL
KELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILHWSSLE
MLNSNSLVGLNLTTLVLTNCNLSAIPYSPLRHLAYLQYLDLSYNPITSIQGNLLGDLLRL
QELHLVGGNLLRIEPGAFRGLSRFRLLNVSSNRLSTLEESAFHSVGNLQTLRLDRNPLAC
DCRLLWVMRRRRRLDFDGRQPTCSPLNHQRKAFRDFSEAELPVVFTCRQAQILNRQLQDI
SVIEGMRVHFDCKADGYPSPSITWLSAQQSALSSAGRVRVLTNGSLQISYAQVQDSGTYL
CSAANAAGNDSISVSLHVEGLPQNRTVSYFSDEGWIETSAPPSTNSSARVSSPYPFDAKT
LIIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSMGGGGDGGDTGRFT
MKLI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgttcctggatttgtgtggtcagcggggcgcatggaccgtcctgctgctgtggtgcctg
aacttgtcagctgcagacctcccctgccctcagaggtgcagctgctcccgagaccctctg
gaggtcaactgctcttcgagacacctgactgctgtgcctgagggtttacccaccaatgcc
aaacgcttggatctttcaggaaaccagctgaaaacgctggctaggcgtcagttctccagc
ctgtcaaagctggaggacctggacttgagtgagaacataatctccatgattgaggtggaa
acatttcagggtctgaagaacctgcgatacttgaggattaagaacaaccgtctcaagatc
ctgccagtcggggttttctccggcctctccaaccttcgacgtctggatatcagtgagaat
gagatcctggttttcctggattacacattcagggatatgattaacttgcagcagctggac
gcaggggaaaatgacctggtgtttatctcgcagcgtgcgtttgttgggcttcaggcactg
aaggagctgaacgtggaccgcagcaatctgacctccatcccaaccgaagctctgtcgcaa
cttcagagcttgactaagctgcgtctgcgcaagctcactattagcgtgctgcccaacaat
gcctttcgccgactgcaccagctgcgtactttgcagatcctccactggagttctctcgag
atgctgaacagcaacagcttggtcggcctgaacctgaccactttagttttaaccaactgc
aatcttagtgccataccttactctcccctgcgccatcttgcctacctgcagtaccttgat
ctatcctacaaccccatcacctccatacagggcaaccttttgggggatcttctgagactc
caagagttgcacctggtgggtggaaacctgctacggatagagccaggtgcctttaggggt
ctgtcccgctttcgcttactcaatgtgtcctcaaatcgtctgtccacactggaagaaagc
gcctttcactctgtggggaacctgcagacactgcggctggacagaaacccgttggcttgt
gactgtaggctactctgggtgatgcgacggcgtcggcggctggattttgatggccggcaa
cccacttgttcacccctgaatcatcagaggaaggcatttcgggacttctcagaggcagag
cttccggttgtttttacgtgcagacaggcgcagatcctgaaccgacagctgcaggatata
agcgtgattgagggaatgagagtacattttgactgcaaagcagatggctatccatcaccg
tctataacctggctgtcagcccaacagtctgcacttagctctgccgggagagtacgagtg
cttactaatgggagtttacagatcagttatgcgcaagtacaagacagtggaacatattta
tgtagcgcagctaatgctgcaggtaatgacagcatctctgtgagtctgcatgtggagggg
cttccacaaaaccgcacagtgtcatatttctcagacgagggatggatagaaacttcagca
cctccatctaccaactcctcagctcgggtgtcaagtccttacccgtttgatgctaaaacc
ctcatcattgctaccaccatgggatttctgtcttttctcagctctgttgcaatctgtttt
gtgtttatgttcttctggagtcagagcaaaggtcagataaaacacactgccacaatagac
tttgtgccacgatcatctatgggtggaggtggagatggtggagacaccggaagattcaca
atgaagcttatttga
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