Danio rerio (zebrafish): 559245
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Entry
559245 CDS
T01004
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C A
KO
K08533
RAR-related orphan receptor beta
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
559245 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
dre03310
]
559245 (rorca)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
559245 (rorca)
Nuclear receptors [BR:
dre03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
559245 (rorca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
559245
NCBI-ProteinID:
NP_001076288
ZFIN:
ZDB-GENE-990415-250
Ensembl:
ENSDARG00000057231
UniProt:
A3R3K0
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All DBs
Position
8:complement(20754075..>20761869)
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AA seq
479 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCIIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQERAGGLGNGISSHTGD
EAGENGNGHSRAYSRGSSTTLSDLDDITTLPDGLLFDLPLTPEEAADYCSLELLGGSSGN
SSSSQSSPESNRQEFGDVTHIKHEYMSPHESGLFTRSILNPPEGCSLMEIERITQNVIKS
HIETSQYSTEELKRLAWTLYTPEEIRVYQNKPTEMLWQQCAVQLTNAIQYVVEFAKRISG
FMDLSQNDQIILLKAGCLDVLLIRMCRAYNPINNTLLFDGKFASPQLFKALGCDDLVSAV
FEMAKTLSRLQLSGEEMALFTATVLLSPDRPWLTDAQKVQKLQEKVYVALQHYLHKSGVH
EEKLARMVSKLPMMKSICNLHIDKLEFFRLLHPETAYNFPALYREVFCSEITFPDSTEG
NT seq
1435 nt
NT seq
+upstream
nt +downstream
nt
agctcaaattgaagtaatcccatgcaagatttgcggggacaaatcatcaggcatccacta
tggggtgatcacttgtgaaggctgcaagggcttcttccgtcgaagtcagcagaacaatgc
catgtactcctgctcaaggcagaggaactgcattattgaccgaaccaatcgcaaccgctg
ccagcattgccgcctgcagaagtgtctggcactgggcatgagccgtgatgcggtgaagtt
tggccgcatgtcaaaaaagcagcgtgacagtctttacgccgaggttcagaagcaccagca
gtcccaggagcgagcagggggtcttggcaatggtatatccagccacactggggatgaggc
tggggagaacggcaacgggcacagtcgggcttacagtcggggctccagcaccaccctcag
cgatctggatgacattaccacactaccagacggtcttctttttgatctgccgctcacacc
ggaggaagctgcagattactgcagtttagagttattgggaggaagcagtgggaacagttc
gtcttcccagagttctcctgagtcaaacagacaagagtttggtgacgtgacgcacatcaa
acacgagtatatgagcccacacgagtctggactcttcactcgctcgatacttaatccacc
tgaaggctgctcattgatggaaatagaacggatcacacaaaatgtgataaaatcccacat
tgagacaagtcaatacagcacagaagaactgaaaagattagcctggaccctctacacacc
tgaagagatccgtgtctaccaaaacaagcccacagagatgctgtggcagcagtgtgcagt
gcaactcaccaacgccattcagtatgtggtggagtttgccaagcgaatctctggattcat
ggacttgtctcaaaatgaccagattatccttctgaaagcaggctgcttggacgtgctttt
gatccgaatgtgtcgggcctacaaccccatcaacaacacgctgttgttcgatggaaagtt
tgcaagcccacagctgttcaaagcactcggttgtgatgatctggtgagcgctgtgtttga
gatggctaaaaccctcagtcggctgcagctgtcggaagaagagatggctctatttactgc
tactgtgcttctgtctccagaccgaccttggttgacagatgcccagaaagtgcagaagct
tcaggagaaggtctatgttgctttgcaacactatcttcataaaagcggtgtccatgagga
gaaactggccaagatggtctccaagttacccatgatgaagtctatttgcaatctccatat
tgataagctggagtttttccgcctccttcacccagaaacagcctacaacttccctgctct
ctacagagaggttttctgcagcgagatcaccttccctgactccaccgaaggctaa
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