Danio rerio (zebrafish): 559419
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Entry
559419 CDS
T01004
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
559419 (npas1)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
559419 (npas1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
559419
NCBI-ProteinID:
NP_001315312
ZFIN:
ZDB-GENE-060503-934
Ensembl:
ENSDARG00000015876
UniProt:
A0A2R8Q2I0
LinkDB
All DBs
Position
15:complement(8421385..8517376)
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AA seq
770 aa
AA seq
DB search
MAAMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASIIRLTISYLHMRHFASQGDPPWSPLMEGENNCSKVRRTSHSLV
TDIFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCQTSHESASSSASTSSLAGTPEPAPHSPCSPVRELSERGFF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPSSSRALHRPMGLVALAHTLPPSTL
NEVRMESHMFVFRVNMDLQVTYCENRISEYMDLSPAEVVGHTCYHFIHAEDLDTVRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWIQSCATVSINHKAPHERNVIWVNYVLSRPELADMPL
DLLQLPESLRAERLQASSSPRDMSPKTQGSTGTQPLKSRSETDLKGKEAFSHNTSSQSEN
TRKRLHQTDSESGPPEARRRMEVFRQREDSPCTSSDQASDSEVEEDDERESEWDHNPSSK
RVKNEEGASKQGNGANGAGKIHNGRAVIQHLKSVVTSSGSNIKTEQEVLGTTVGAGSGRR
WSQPLLGNGGPNGSSPPSQPPNSTPTEAPPKGLFSPPSPTLSPPIPASSLPRDDRSIHGG
RASDFELLQRLTASGAAGRVLFHPLALGPQGPQSLYAPSTIRYAPPEMPTIHTEGHRSDH
GAKTPTFFPHLQRITSLPPFSGFSPAEPTFPPTLPFCMNGLRGAAGTDED
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggcggccatgccgttcgtcagcgagggcaagtgtgtgtccgtcgagtgggactttctt
caggggcttctcgccaaaccacccaccttaccctgcttgcagaacttgaggaaggagaag
tcccgcaatgcagctcgttctcggcgaggcaaagagaactttgagttcttcgagctggcc
aagatgctccccctccctggggcaataaccagccagctggacaaggcctccataatccgc
ctcaccatcagctacctgcacatgagacacttcgccagccagggagacccgccctggagc
cccctaatggaaggagagaacaactgcagcaaggtgcgaagaacaagtcattcattggtc
actgacatattcgaacagcatttgggagctcatctactgcagtctctggatggatttgtg
tttgtggtcagtcaagaaggcagatttctttacatctcagagaccgtctccatctacctt
ggcctttcacaggtggagttgactggcagcagtgtgttcgattacatccaccctgcggat
catgtggagatggcggagcgtctgggcatcaggccacacctgcgggcagaggccggctgt
cagacgtcccatgaaagtgcttcaagctcagcatccacgtcctcgctggctggcactcca
gaaccagcaccacacagtccttgttctccagtcagggagttgtcggaacgtggcttcttc
atccggatgaaatccacactcaccaaacgtggcctccacgttaaatcctcgggctataaa
gtgattcatgtgacaggtcggattcgatgtcggccagcactggtgcccagctcctcccga
gccttacatcggccaatgggattggtcgctctggctcacacacttccaccctccacgctc
aatgaggtgcgcatggaaagccacatgtttgttttcagagtcaacatggatctgcaggtc
acctactgtgaaaacaggatttcagagtatatggacctgagcccagctgaagtggttgga
catacctgctatcacttcattcatgctgaagacctggacaccgtcaggcagagccatgaa
gacttgctgcggaaagggcaggttgtgaccggatattaccgttggctgcagaggagagga
ggttatctgtggattcagtcctgcgccaccgtttctattaaccacaaagcaccccatgag
cgtaatgtcatctgggtcaactatgtgctcagtcggccagagctggcagacatgcctctg
gacttattacaacttccagaaagcctgagggcagagcggcttcaagcaagctcctccccg
cgcgacatgtctccaaagacacaaggctctactgggacgcaaccattgaaaagcaggtct
gaaacagacctcaaaggaaaggaagccttctcacacaatacttccagtcaatcagagaac
actaggaaaagattgcaccagactgactctgagagtgggccacccgaggcaaggagacgg
atggaggtgtttcgtcagagagaggacagcccgtgtacctcctcggaccaagccagtgac
agcgaggtggaagaggatgatgagagggagagcgagtgggaccacaatccctccagcaaa
cgggtgaagaatgaagagggggcttcaaaacaaggcaacggggctaacggagcaggtaag
atccacaatggccgtgctgtgatccagcatcttaagagtgtggtgaccagttccggatca
aacattaagactgaacaagaagtgttgggcacaactgtaggtgcaggttctgggaggcga
tggagtcaacctctgcttggcaatggcggacctaatggcagcagtccaccttcccagcct
ccaaattccaccccgacagaagctccacccaagggtctattcagcccaccctccccaacc
ctgtctccacccatcccagcatcatccctacccagagatgaccggtccattcatggagga
cgtgcttccgactttgagctactgcagagactaactgcaagtggggctgcaggacgtgtt
ctttttcatcccctggctctcggcccgcagggacctcagagtctctacgctccaagtacg
attcgctacgccccacctgagatgcccacaattcacactgaaggtcaccgctcagaccat
ggagccaaaactcccactttctttcctcacctgcaaaggatcacatctctgcctcccttc
agtggcttttctccagccgaacccacctttcctccaactctgcccttctgtatgaacggt
ctgaggggggccgcagggacagatgaggattga
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