Danio rerio (zebrafish): 559561
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Entry
559561 CDS
T01004
Symbol
scml2
Name
(RefSeq) polycomb protein SCMH1 isoform X1
KO
K11465
sex comb on midleg-like protein 2
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
559561 (scml2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
559561 (scml2)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
559561 (scml2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
SAM_1
RBR
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
559561
NCBI-ProteinID:
XP_073772975
ZFIN:
ZDB-GENE-130530-546
Ensembl:
ENSDARG00000012949
LinkDB
All DBs
Position
11:complement(32341867..32393931)
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AA seq
723 aa
AA seq
DB search
MGKTHQKDKKHHKEKSGRNNEDSQPSQKLTEAFSWEMYLRETSSCPASPSCFRQSRVPPA
NDFRVGMKVEACDPRNASSWCIATVMGLMGVRLRLRLDGSDSTNDFWRLVDAADIQPIGT
CEKSGDMLQPPLGFRMNASSWPMFLLKTLSGAEMAPSSAFKKEPPRPTQNFFKAGMKLEA
VDRKNPYLICPATIGEVRGDKIFIMFDGWRGAFDYWCQFDSRDIFPVGWCQLTNHSLQPP
GNCFTIPKTLLPSVSRPSPSWRPMQSPYRLPHPLPPLPVRKGVRGRRPKSQTIAMLKAAA
EAAAAGNSPSQNGQSQPTSAHKSPISSPLTPKPYKKRGPKPGSKRKPKVPHSLSSPILSS
SVSDGRLSSLQTTRDSGVVSTVCVYVNKHGNSGPHLDRKLLLQLPDHFGPGPVNTVLQHA
VQACVDCAFQPKALFSFLQSQSDGGEIIRVRSEGGIHYVKLPTASSASFVLRFLETLCHH
LQCDNLFSSQPFSPLTSSTHTPYERSKSVKEETSEALSVARGTRRFNRDSSAYSTALSPK
LQRTEALPSDETIAHAENGASTEQQFLEESMDSASKSVAPRPPAHRSTSEFHTPTGSSPH
YPSHPPLLRGLSSNPAEPRTHRRVEGRLSASSTTGPDHQATEKDPSKTSNKSPSSWSIEE
VMQFVRDADPQALGPHAELFRKHEIDGKALMLLRSDMIMKYMGLKLGPALKLCHHIEKLK
QTK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaacccaccagaaagacaagaagcaccataaggagaaatcggggaggaataat
gaagattcacagccttcacaaaagctcacagaggcgttcagctgggaaatgtacttgcgg
gagacgtcgtcctgtcctgcttcccccagctgttttagacagtctagagttcctcctgct
aatgattttagagtggggatgaaggtggaggcctgtgacccgaggaatgcctcttcctgg
tgtattgccacagtcatgggtttgatgggtgttcgtttgcggctccggctggatggcagt
gacagcaccaatgacttctggaggctggtggacgcagctgacattcagcccatcggcacg
tgtgagaagagtggagacatgctgcagccgccactgggatttagaatgaatgcttcttca
tggcccatgttcctattaaaaacattaagtggagcagaaatggctccatcttcagccttt
aaaaaggagccacccaggccgactcagaacttctttaaagcgggaatgaaactggaggcg
gtggacagaaagaacccgtacctcatctgtcctgcgacaatcggggaggtcagaggagac
aaaatcttcatcatgtttgacggttggagaggagcgtttgactactggtgtcagttcgac
tccagggacatcttccccgtgggctggtgtcaactgaccaaccacagcctgcagccaccc
ggaaactgcttcactatcccgaagactcttctgccatcagtgagtcgaccgagtccatct
tggcgccccatgcagtccccttaccgcctgccgcaccccctgccgcctctgccagtgcgc
aagggggtacgaggaaggagaccaaagagccaaaccatcgccatgctgaaagcagcagct
gaagccgcagcggctggaaacagtccatcacagaacggccaatcacagcccaccagcgca
cacaagagtcccatcagctcaccactcacacccaaaccatacaagaagagaggacccaaa
ccaggcagcaagaggaaaccaaaggttcctcattcactttcaagccccatattgtcctca
tccgtgtcagacgggaggctgtctagcctgcagacaacaagagactcgggcgttgtgtct
acagtttgtgtctatgtgaataaacatggtaactctgggccacacctggaccgtaagctg
ttgttacagctgccggatcattttgggccgggccccgtgaacacggttctccagcatgcg
gttcaggcctgcgtggactgtgcgtttcagcccaaagctctcttcagcttcctgcagtct
cagtctgatggtggggaaatcatcagagttcgctctgaaggaggaatacactatgtcaag
ctgcccactgcctccagcgcatcatttgttctgcgctttctagaaactctgtgccaccac
ctgcagtgtgataacctgttcagcagccagccgttcagcccactgacctccagcacacac
acaccatacgaaaggagcaaatcagtgaaagaggagacgtcggaagctctgtctgtagca
cgaggtacgaggcgcttcaacagagactcgtcggcctacagcactgccctgtcacccaaa
ctacagagaacagaagctctgccctcagatgaaaccatcgcccatgctgaaaacggtgcc
tccacagagcagcagttcttagaagagtcaatggactcggcctccaaatcggtggcccct
cgaccccctgcgcaccgcagcacatctgagtttcacaccccgaccggcagcagcccacac
tacccctcccaccctccactgctgcgcggactctcttctaaccccgcagagccgcgcaca
cacagacgagtggaaggtaggctatctgcaagctcaacaactggtcctgaccatcaagca
acagagaaggatccatctaaaacatccaataagagtccatcatcctggagtatagaggaa
gtgatgcaatttgtgcgagatgccgatccacaagcactgggtccacatgcagagctcttt
aggaaacatgagattgatggcaaggctttgatgcttttacggagtgacatgatcatgaag
tacatggggctgaaactggggcctgctctcaaactttgccatcacatcgagaaactcaaa
caaacaaaatag
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