Danio rerio (zebrafish): 559593 Help Entry 559593            CDS       T01004                                  Symbol acanb Name (RefSeq) aggrecan core protein   KO K06792   aggrecan 1 Organism dre  Danio rerio (zebrafish) Brite KEGG Orthology (KO) [BR:dre00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:dre00535]     559593 (acanb)    00536 Glycosaminoglycan binding proteins [BR:dre00536]     559593 (acanb)    04091 Lectins [BR:dre04091]     559593 (acanb) Proteoglycans [BR:dre00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    559593 (acanb) Glycosaminoglycan binding proteins [BR:dre00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    559593 (acanb) Lectins [BR:dre04091]  C-Type lectins   Lecticans    559593 (acanb) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C Sushi V-set EGF_C8A_B_C6 I-set EGF_alliinase EGF Motif Other DBs NCBI-GeneID:  559593 NCBI-ProteinID:  XP_021329528 ZFIN:  ZDB-GENE-100422-16 Ensembl:  ENSDARG00000045799 UniProt:  A0A8M9PR78 LinkDB All DBs Position 25:complement(19209610..19224310) Genome browser AA seq 1373 aa AA seqDB search MSLIWLLLYICTHGISGMILFGDMADQDSTLSVSIPVEQPLRPLLGGSMVIPCYFQDITL QDPGTLTSPTNAPLSQRIKWSHIHKGKISLILVATEGQVQVETEYLDRVHLVNYPMVPSD ATIEISELRSHDSGTYRCEVMQGIDDNYDSVEMQIQGIVFHYRAISTRYTLTFEMAKAAC IQNSAVIATPAQLQAAYDDGFHQCDAGWLSDQTVRYPIHEPREPCYGDKDNFPGVRTYGV RDVNETYDVYCFAEKMSGRVFYSMSVEKFTFADAEDQCAKLGAQLATTGQLYLAWKTGMD VCNAGWLADRSVRYPINIARPQCGGGLLGVRTVYLFPNQTGYPYPDSRYDAICYEDKEDK VLIKTTPFPEIYTTTESVLTVATVTSSSSDYTEQVTTEGEVRGQILTDEPFNTTSTESPL SPPLNITDVEEDIINVATAPPSLEHAIPSINVTAKIKGVVFHYRAESGRYAYTYEEAQDA CQKLGAVIATPELLQAAYEAGLHQCSAGWLQDQTVRYPIVHPRKKCSGDSEDVPGVRSYN VRPAHEQYDVYCYMDQIKGEIFHVSSLAGFTYYEAVAHCRKLSSTLASTGELYAAWNQGF HKCSPGWLADRSVRYPVGSPDFDCGGNKTGVQTIYAQPNQTGSPHPYSRYDAYCFKANLS LGFDEDMLNATDITMLQRPVHPIVPPLFVDMSGSGSGSGYASASTSGSGSDSASGSASGV PDSSSGYISGSGIASGSASGSGQSGDGSGFLVRYQEGTDALMWSSASGSASEAKDGSGSG IIITSGIQSGDQESGEESGHFAVASGLPSGLGSGISGSGTSGFFSGEESSGSGFFSVSFV DTKMIDLTARAFGEQELSGFYTAESGFPSGSGSFSGFETGSAIGFESNSAFGSGSGFETG SAIGFESNSASAFGSGSSSGFESSSAFGFGSGSASGFGSGIASGIESSPASAFGSGSASG FGSSSAIGLESSSASGFKSVSVTGTSGYPNHPSGEVSENIQRQDGEMIIFTDDEVTELTL RPTAGTEQGRGSVEISGEGSTPEPYTEDSISVSNSTSHESNDLLPERDEKISVTMEAFDV TDKSPLITTPTNIPVLTTPSSASLQMPKSTMNPSVNEAPFDPCDPNPCGQGLCSLQDGVA LCQCHSGFSGENCSMLVQGCAEGWMEFMGSCYIHFDERETWTSAEQHCQELNSHLVSISS QQEQEFVKTQAQDYQWIGLNDKDVQNEFRWTDGSPLEYENWRPNQPDNYFSTGEDCVVMI WHENGQWNDVPCNYHLPFTCKSGPVTCTTPPEVQNARMLGNSKDRYPVNSFIRYQCNSGF TQRHLSVVRCLPDGQWEKPRVECIRGIENNRLRKRSLYIRPKAVNSRTWRKVL NT seq 4122 nt NT seq  +upstreamnt  +downstreamnt atgtctttgatttggctcctgctgtatatatgcacccatggcatttctggcatgatatta tttggagacatggctgatcaagacagcaccctcagtgtgagcatccctgtggaacagcca ttgcgtcccctacttggggggagcatggttatcccctgctactttcaggacatcaccctc caggaccctggcaccctgacctcccctaccaatgccccattgtcccagcgtattaaatgg agtcatatccataagggcaaaatatcccttatactggttgctactgagggtcaggtgcag gttgagacagagtacttggacagggttcatctggtaaactaccccatggtgccaagtgat gctaccattgaaatctcagaactccgttcccatgattctggcacctaccgatgtgaggtc atgcaggggattgacgataactatgattcggtggaaatgcaaatacaaggcattgtattt cactaccgagcaatttctacccgatacacattaacctttgaaatggcaaaagcagcctgc attcagaacagtgctgttatcgcaactccagcacagttgcaagctgcctatgatgatgga ttccatcagtgtgatgctggctggctttcagaccaaaccgtgagatatcctatccatgaa ccaagggagccttgttatggagacaaagataatttcccaggtgttcgaacatatggagtc cgagacgtcaatgaaacctatgatgtgtactgttttgcagagaaaatgtcaggcagagtg ttctactctatgtccgtggaaaagttcacctttgcagatgctgaagaccaatgtgcaaag ttaggagcccaattagctaccacagggcagctgtacctagcatggaagactggcatggat gtgtgcaatgctggctggcttgcagacaggagtgtgcggtaccctataaatatagctaga ccccaatgtggtggggggcttttgggagtgcgaacagtttacctgtttccaaatcagact ggttatccatacccagactcccgctatgatgcaatctgttatgaagataaagaagataag gtcttaataaagaccacgccatttccagaaatatacactaccaccgagtcagtgttaaca gtggctacagttacatcaagctcttcagattatacagaacaagtgaccactgaaggagag gtccgtggccaaatattgacagatgagccttttaacacaacaagcacagaaagtccccta tctccacctctcaacataactgatgttgaggaagacatcatcaatgtggccacagctcca ccttccctggaacatgcaattcccagtatcaatgtcactgctaaaatcaagggagtggta ttccactatcgtgctgaatctgggcgctatgcttacacttatgaggaagcacaagatgct tgtcagaaactgggagcagtcattgccactcctgagctccttcaggctgcttatgaagct ggccttcatcaatgcagtgcaggttggctacaagatcaaactgtcagatatccaattgtg catcctcgaaagaaatgctctggagatagtgaggatgtccctggtgtacgctcttacaat gttaggcctgcacatgaacaatatgatgtgtactgttacatggaccaaataaagggggag atcttccatgtgagctcactagctggctttacctactatgaagctgttgcccattgcaga aaactgagttctactcttgcctcaactggagaactctatgcagcgtggaatcagggtttc cacaagtgcagcccaggatggctggctgaccgcagtgtccgctaccctgtaggtagccca gactttgattgtggtggaaacaaaactggagtccagacaatttatgcccaaccaaaccaa acaggctccccacatccatactcaagatatgatgcatactgttttaaagcaaatctgtct ttggggtttgatgaagatatgctgaatgctacagacataacaatgctgcagagacctgtt catccaattgtccctcccttgtttgtggacatgtctggatctggatctggatctggatat gcatctgcatctacatctggatcaggctcagattcagcctcaggctcggcatcaggtgtt cctgattctagttccggttacatttcaggaagcggtatagccagtggtagtgcatccggt tctggccaaagtggtgatggatcaggtttccttgtgaggtaccaagaaggtacagatgca ctcatgtggtcttctgcctcaggtagtgcttcagaggctaaagatggcagtggtagcggt attatcattacttcgggaatacaatcaggggaccaagaatcaggagaggagtctggacac tttgcagtggctagtggtcttccatctggacttggcagtggaattagtggttcaggaaca agtgggttcttcagtggtgaagaatcaagtggatcaggcttcttcagtgtgtcatttgta gacacaaaaatgattgaccttactgcaagagcctttggagagcaggaattgtctggtttt tacactgctgaaagtgggtttccatctggttctggatctttttctggctttgaaactggt tctgccattggatttgaatcaaactctgcctttggatctggttctggctttgaaactggc tctgctattggatttgaatcaaactctgcctctgcttttggatctggctcttcctctgga tttgaatctagctctgcctttggatttggatctggctctgcctctggatttggatctggc attgcctctggaattgaatctagccctgcctctgcatttggatcaggctctgcttctgga tttggatctagctctgccattgggttagaatcaagctcagcctctggctttaaatcggtc tctgtcactggaacatcaggatatcctaatcatccttcaggcgaggtgtctgaaaacatt cagagacaagatggagagatgattatttttacagatgatgaggtcactgagttgacgtta aggcccacagctggaacagaacagggtcgtggatcggtagagatcagtggtgagggcagt actccagaaccttacacagaagattccatatcagtttcaaatagtacttcacatgaatca aatgacctcctaccagaaagagatgagaaaattagtgtcaccatggaggcttttgatgtg actgacaagtcacctctgattaccaccccaactaacatccctgtactcaccactccatct tcagcttcacttcaaatgccaaaatcgacaatgaatccatctgttaatgaagctccattt gacccctgtgatccaaacccctgtggtcaaggtctatgttctttacaagatggagttgct ttatgtcaatgtcattcaggattcagtggagaaaactgctcaatgttggtacagggatgt gctgaagggtggatggagttcatgggcagctgttacattcattttgatgagcgtgagact tggaccagtgctgagcaacactgtcaagagctaaactctcacctagttagcatatcctcc caacaagaacaagagtttgtaaaaactcaagctcaagattatcagtggatcgggctaaat gataaggatgtgcaaaacgagttccgttggacagatggaagtcctttggaatatgaaaac tggagacccaatcagccagataattactttagcacaggagaagattgtgttgtaatgata tggcatgagaatggccagtggaatgatgtaccttgcaactaccatcttcctttcacttgc aagagtggacctgtcacatgtacaacgcctcctgaggtgcagaatgcacggatgcttggg aacagcaaagatcgctacccagttaattctttcattcgataccagtgtaacagtgggttt acacagcgccacctttctgtggtgcgctgtttaccagatggtcagtgggaaaagcctcga gtggaatgcataaggggcatagaaaacaacaggctaaggaaaagatccctgtatatacgt cccaaggcagtcaacagtcggacgtggaggaaggtcctgtaa

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