Danio rerio (zebrafish): 559987
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Entry
559987 CDS
T01004
Symbol
si:ch211-106h11.1
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D isoform X1
KO
K22038
volume-regulated anion channel
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
559987 (si:ch211-106h11.1)
Ion channels [BR:
dre04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
559987 (si:ch211-106h11.1)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_R13L1-DRL21
LRR_LRWD1
LRR_EndoS
LRR_9
ATG9
Motif
Other DBs
NCBI-GeneID:
559987
NCBI-ProteinID:
XP_009297371
ZFIN:
ZDB-GENE-061009-2
Ensembl:
ENSDARG00000017720
UniProt:
B0S5F3
A0A8M9PTX1
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Position
3:complement(5646198..5667418)
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AA seq
857 aa
AA seq
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MFALSELWSGGERQGSYKLLKPWWEVFMDYLLVLMLMVSILAGTLLLSRDGVVCVPVHSF
PTNHTSTIDPIPETAFTSTSARGRRTNLDFQQYSYISQVCYHEALPWYSRFLPYVTLLHT
LVLLASGCFWFHFPLTSARIEHFLSLLAKCCESPWTTRALSHTAKLDTRFSEAEPVVQPK
AQVASSYKMRKSSLDSGTDSPLLAGIDTASTTTQPSPCPSTVSHCSAFSTRSLTEPVHAV
QVSPDRSRPGATLDRSDREQARALFERVRRFRAHCESSDVIYKVYTAQTVFKVLKFVMIV
SYTTPLLSCISFSHVCRPHSDALIGYSEFQCSHPLSSVLRQLMQAYVSLLFLFGLLAIYA
LFWILHKSLRQYSFQTLREKGSMLDAPDLHNDLAFLLHMADQYDPLLAQRLSVFLSPVSE
TRLLQESVERRWGAERLRAITSSDQQGRSVLQLVALPHLPPALFSFSTLQVLKLELIADA
KLTAQITNMSALRELHLYHCSASVDPGALQFLQEHLEVLHLTFTTASEIPGWIYSLRGLQ
ELQLTGRLGSEGGMGRGWTLGSLRQLRHLRVLVLRGTLQKVPAELSELAGSLLKLEIHNE
GTRLLVLTGLRRVPGLTELHLQGCQLERLPSALLALSGLRSLDLQHNSLRTLEELLGLQH
LRRLSCLRLAHNQVLSLPASVGVLRALELLDLAYNQLQTLPSALFTLHRLRRLLLAGNLL
QDLPADIAALRLLNELDLSANKLERLPAELFVGCVELRVLNVANNSLCCLPAGVSALTLL
SRLDVRGNSLEVLPLELGCCSGLRGGGLLTEGWLMHTLPPQVRDALLSEAPSRPSSECFP
RFPSTQWSFHSALESRI
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctctgtctgagctgtggtcgggtggcgagcgtcagggcagctataagctccta
aaaccatggtgggaggtcttcatggactacctgctagtgctaatgctaatggtgtccatc
ctcgccgggactctcctgctgtcccgggacggagtagtgtgtgttcctgtgcactcgttc
cccactaaccacacctccaccattgatcccatccctgaaactgcctttacaagcacatcc
gcaagggggcgacgtaccaacctggacttccagcagtacagctacattagccaggtttgc
tatcatgaagcgctgccctggtactcgcgcttcctaccgtacgtcacgctgctccataca
ctggttctgctggccagcggctgcttctggttccacttcccgctcacttccgctcgtatc
gagcacttcctgtcacttcttgccaaatgttgcgaatcgccatggacgaccagagcgctg
tcgcataccgccaaactggacactcgcttctccgaggcggagccagtggtgcaacctaaa
gctcaggtagcttcatcgtacaaaatgcgcaagtcgagtttggactcgggaacggacagc
cctctgctggcaggaattgacactgcatccacaaccacacagccgtctccatgtccctcc
acagtgtcccattgctcagcgttctccactcgctcactcacagagcctgtccatgcggtg
caagtcagtccggaccgctccagaccaggcgccacgctggaccgcagtgacagagagcag
gccagagcgctgttcgagagagtgcgcaggtttcgagctcactgcgagagttcagatgtc
atctataaggtgtacacggcgcagacggtgttcaaagtgctgaagtttgtgatgatcgtg
agctacaccactcctctgctgagctgcatctccttcagtcacgtctgccggcctcactcc
gacgctctgatcggctacagtgagttccagtgcagtcacccgctgtcctctgtcctgcgg
cagctcatgcaggcctacgtctcgctgctctttctgttcggcctgctggccatctacgca
ctcttctggatcttacacaagtctttaaggcagtactcgttccagactctgcgtgagaaa
ggctcaatgctggacgctccagacctccacaatgacctggcgttcctccttcacatggcg
gatcagtacgaccctctgctggcacagcgtctgtccgtgttcctgtcaccggtcagcgag
acgcggctgctgcaggagagcgtggagcgacgctggggagccgaacgcctgcgtgccatc
acctcttctgaccagcaggggcgctctgtcctgcagctggtggctctccctcacctgccg
cccgcgctcttctccttcagcacgctgcaggtgctcaagctggagctcatagcagatgcc
aaactcactgcccagattaccaacatgagtgcgctcagagagcttcacctttaccactgc
tctgcatctgtggatcctggagcgctgcagtttcttcaggagcatctagaggtcctgcat
ctaaccttcaccactgcttcagagatcccgggctggatttactctctgcggggccttcag
gagctccagctgacggggcggctgggcagcgagggcgggatggggcgcggatggaccctc
ggaagtctccgacagctgcggcacctccgtgtcctggtgctgcgcgggacactgcagaaa
gttccagcagaactgagcgaactggccgggagtctgctgaaactcgagatccataatgaa
ggcaccagattactggttcttacaggtctgaggcgtgtgccagggctgacggagctgcat
ctgcagggctgtcagctggagcgtctaccatcagctctgctggctctctccggcctgcgc
tctctggatctccagcacaacagcctgcgtacgttagaggagctgcttggtctgcagcat
ctgcgccgcctgtcctgcctcagactggcccacaatcaggtgctgtccctgccggcgagc
gtgggcgtgctgcgggcgctggagctgctagatctggcctataatcagctgcagacacta
ccatctgcgctctttacgctgcacagactgcggcgcctcctgctggctgggaatctgcta
caggatctgccagcggatatagcagctttaaggcttttaaatgaactcgatctgagcgct
aataaactggagcgtcttcctgcagagctgtttgttggatgtgttgaactgcgagtgctg
aatgttgcgaataattctctgtgctgtttgccggccggtgtgtccgcgctgaccctgctg
tcccggctggacgtgcgcgggaatagtctagaggtgctgccactggagctgggctgctgt
tcaggactgcggggcgggggtctattgacggagggatggctgatgcacacactgccccca
caggtcagggacgccctgctgtctgaggctccgtcgcggccctcatctgaatgctttccc
cgttttccatccacgcagtggagctttcactccgctctggagtctcgaatatag
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