Danio rerio (zebrafish): 560234 Help Entry 560234            CDS       T01004                                  Symbol nphp4 Name (RefSeq) nephrocystin-4 isoform X1   KO K16478   nephrocystin-4 Organism dre  Danio rerio (zebrafish) Brite KEGG Orthology (KO) [BR:dre00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:dre03037]     560234 (nphp4) Cilium and associated proteins [BR:dre03037]  Primary cilia and associated proteins   Nephronophthisis-related proteins    560234 (nphp4) SSDB OrthologParalogGFIT Motif Pfam:  NPHP4_C2_3rd Ig_NPHP4_1st NPHP4_C2_2nd Ig_NPHP4_4th Ig_NPHP4_2nd Ig_NPH4_3rd NPHP4_SK Motif Other DBs NCBI-GeneID:  560234 NCBI-ProteinID:  XP_021334094 ZFIN:  ZDB-GENE-060503-715 Ensembl:  ENSDARG00000069014 UniProt:  A0A8M9QA20 LinkDB All DBs Position 8:complement(23875406..24171865) Genome browser AA seq 1418 aa AA seqDB search MSEWRSAFQRNRVIPPHSQTARQAPGSAQGLQLLFKHLDGLHVTQSESPPSLQYQLRVTL FDSGHQHFFGRTWKSGSHSVSGSPGQSYRVLFNEVVYFHTSLCLSSVMAVVELVSLSTRA DGTQEAVGSGFGLLQLFTGHAESSVSQGEDRLNLFHGTPRALLHPTLKDPLQLNAMLSVM EGTQLIYSIQPHLALTTIMHLLPPNVLVSGHEKIPGVVSPTDTDTADALRKPRLLKSFSC VLEGLRVTLFPSVEVFESDLLQLLNRDCQNTNRGAEGRSVVVQERRLLVGVHNGWGWVEK PQVLVLERDSGGTEAAKARGSSFRQTSTDKLSSDGLSLRGGVQLKLMRDVDFSIVFQLQY VFSCPLAVDGQLTSTAVPRAAFMQCVRWCAWSLFWDPEGPGENVCLNLQGDSFPNPWAVM VYTTSTQQTNSGKCVIKLKFSSSAEGVSSSAALKVSHQETSAPKKLLSASQDERIFESTA SVLQSSRGPALSLSQLVATSRYPTMSHTTGSPWQQQLPSLLSPSPMASAHQLSHVERPVV GSIAHLELSVQERVGDRSEEEDEMQELTFTPVHAPVITLGTNAAGSSRSTSRRSLAQLFS AGFPQILDHQNQVAEVLDPSEPVNFNPQREEADSLQTNTLILQFLAFTRVPQSGVNSDWP SSVHFTFQLYRFPPVTTQRLKLLDQEKTSKFKGSSDSPCVLSLLNKDGTLSSGFPGLQLQ YRVDPQFLKPGERGWFLRYLALHSLQIDVWDSDSLMLIGSAAVELKHMLRQGRPAVQVSH ELEVITTEYMQDASFTSRHDSKHSATSAISVYTTVKGILHLRLGNIGGSVWNTQSSPAVP PSFSHVLQPNDGPQGLAEGRVSALTLLQLNASNARRARRLPEINSELARLLQSSMREVGG AEEKEVRQRKIDRMAAVRQHEEQKDEPPFQDYTNVTSHRADRVQHSRDLRVIEAYRERCK TQEITNMLSQAITTKHTLYATLGTAEFFEFVLKNPFNVPQTVTIECDDPELSVLVKSEEW RYFKELTKTLTPLEEEMFHLKEKTLTPQVYLRPKESVHVPFKYQTFVCGHSFPLQDSKSL KISRSPQMAQKHLSNTIQAKSIKVLFRGEDRKPLAICQVDVEPTPHVVDQTFRFYQPELT FLKKAIRLPAAWDDTADGSASLHVHCSDPNVICHTTNLTPGEPQDIYLKVPGSPSPQIRK FFITIFTDPWLASPAQIWQVYVHYLQRMDLSCVCGALSWHSLLLRGTQAIRRVKCYTSHP LELQVDPAEVFALPAQGVQDVRVGLRALRAGSRFFYLNVVDVDTRQLVDSWLLCITCRQP VISKAFEISVPVEGGKGSNKKISFTNPYSSSRVFNLRTDRPDLLHFKEEQFQIGGGELYT IGLRFAPSQNPGMEEILIFINDKQDKNEDTYCVRVQYR NT seq 4257 nt NT seq  +upstreamnt  +downstreamnt atgtctgagtggagaagcgctttccagaggaaccgcgtgattccgccgcacagtcagact gctcgacaagcgccaggatctgctcagggtctgcagctgctcttcaaacacctcgatgga cttcacgtgacacagtctgagtctccgccatcacttcagtatcagctgcgggtgaccttg tttgactcaggtcaccagcacttcttcgggcgcacatggaagagcggctcacactctgtc agtggctcaccgggtcagagctatcgagtgctcttcaatgaggttgtgtactttcacact tccctgtgtttgagctcagtgatggcagtggtagagctggtgtctctgtctacccgggca gacggtacccaggaagcagtggggtcaggttttggactcctccagctcttcacaggtcac gcagagtccagcgtctctcagggggaggacaggctgaatctgttccatgggacccccaga gctctcctgcacccaacactgaaagaccctctgcagttgaatgccatgttgtctgtgatg gagggcactcagctgatctactccatacagccacatctagctctcactactatcatgcac cttctcccacccaatgttctagtgtctggacatgagaaaatccctggtgtggtgtcacca acggacacagatacagcagatgcgctgcggaagcctcgtctgctgaagagcttctcgtgt gtgttggagggcctacgtgtgacactcttcccctccgtggaggtctttgaatctgacctg ctccagctgctcaacagagactgccagaatacaaataggggtgcagaaggaaggtcagtt gtggtgcaggagcgcaggctgctggttggggttcataatggctggggttgggtggagaag cctcaagttttggtgctggaacgtgattctggaggaactgaagcagccaaggctcgtgga tccagcttcaggcagacctccacagacaaactcagcagtgatggactgtctcttcgtggc ggtgtgcagctgaagctgatgagggacgtggatttcagcattgtcttccagctccagtat gttttctcatgtccactggctgttgatgggcagctgacatccacagctgtgcccagagca gcgtttatgcagtgtgtgcgctggtgtgcctggagtctgttttgggatcctgagggtccc ggagaaaacgtgtgcctcaacctgcagggcgactctttcccgaacccttgggctgtcatg gtctacaccacaagcacacagcagacaaattctgggaaatgtgtcatcaaattgaagttt tcatctagtgcagaaggagtttctagcagcgcggcattgaaagtgagccaccaagaaaca tcagcacctaagaagttactttcagcttcccaagatgaacggatctttgagtcgacagct tcagtgttgcagtcttcacgtggcccagcgctgtctctctctcagctggttgcgacttca cgctacccgaccatgagccacacgacggggtctccatggcaacagcagctcccctctctg ctctctccctccccgatggcatcggcccaccagctgtcacatgtcgagcgtccagttgtt ggcagtattgctcatctggagctgagcgtgcaggagagagtgggagacagaagtgaggaa gaggatgagatgcaggagttgaccttcaccccggtgcacgcgcctgtcatcaccctcggg acaaacgctgctggctcctccagatcgacctcccggagatctttggcgcagctcttctct gctggttttcctcagatcctggaccatcagaaccaggtggccgaggttctggatccttct gagcctgtgaacttcaacccccagagagaagaagcagattctctgcagacaaacacactc atcctgcagttcctggcctttaccagggtccctcaatctggtgtgaattcagactggccg agctctgtccatttcaccttccagctttaccgctttcctcctgtcaccacccagcggctg aagctgcttgaccaggagaagaccagcaagttcaaaggcagctctgattccccttgtgtg ctttctctgctcaacaaagacggcacacttagctctggttttcctggtctgcagctgcag tatcgagttgacccacaattcctaaagccaggtgaacggggatggtttctgcgatacctg gcactccactcactgcagattgatgtctgggacagtgattccttaatgctgattggctca gctgctgtggagctgaagcatatgctacgtcaaggccgtccggctgtccaggtgagccat gagctagaagtgatcactaccgagtacatgcaggatgccagctttactagcagacacgac agcaaacacagcgccacttcagccatcagtgtctacactactgtgaaagggattttgcat ctacggctcggcaacattggtggcagtgtgtggaatactcagagttctccagctgttcct ccgtcgttctctcatgttctccagcccaacgatggccctcagggtttagcagaaggaaga gtgtctgctttaacactcctccagcttaacgcgagcaatgccagacgagcccgtcggttg ccagaaatcaacagtgaactggccagactcttgcaaagcagcatgagggaagtgggcgga gccgaagagaaggaagtgcgccagaggaagattgacagaatggcagctgtccgtcaacac gaggagcagaaagacgagcccccttttcaggactacacaaacgtcacgagtcaccgggcg gatcgagtgcagcattcgcgagacctgcgtgtgattgaggcctatcgtgagcgctgtaaa acacaggagatcaccaacatgctctctcaggccatcaccaccaaacacacactctatgcc acccttggtacggcagagttcttcgaatttgtgctcaagaacccattcaatgttcctcag acagtcaccattgaatgtgatgacccagagctcagtgtactggtgaagagcgaagagtgg agatattttaaggagttgacgaagactctgactcctctagaggaggagatgtttcacctg aaggagaaaacactgactcctcaagtttacctgcggccaaaagaaagcgttcacgttccc ttcaagtaccagaccttcgtttgtggtcacagctttcctcttcaggactcaaaaagctta aagatttcaagaagtccacagatggctcagaaacatctgtccaatacaatccaagccaaa tccatcaaggtgttgtttcgtggtgaggacagaaagcctctggcgatctgccaggtggat gttgaaccaacgccacatgtggtggaccagaccttccgcttctaccagcctgagctcacc ttcttaaagaaggccattcgcctgcctgcagcctgggacgacacagcagatggatctgcc agcctccatgtgcactgcagtgaccccaatgtcatctgccacaccaccaacctgactcca ggagaaccacaggatatttacctgaaagtacctggaagcccaagtccacagattagaaag ttcttcatcaccatttttactgacccctggctggcctcccctgcgcagatctggcaggtt tacgtgcattacttgcaaaggatggacctgagctgtgtgtgtggtgctctgagctggcat tcgctgcttctgcgtggcacacaagccattcgcagggtcaagtgctacacgtcgcatccc ctcgagcttcaggtggatccagctgaagttttcgctctgccggctcagggagttcaggat gttcgtgtgggcctgagggctctgagggctggaagtcgctttttttacctcaatgttgtt gatgtggacacacggcagctcgtggactcctggctgctgtgcatcacatgccgacagcct gtaatctccaaggcgttcgaaatcagcgttcctgttgaaggagggaagggcagcaataaa aaaatcagtttcacaaacccctactcgtcctccagagtcttcaatctgcgcaccgaccgc ccggacctgctacactttaaagaggagcagtttcagattggaggaggagagctctacacc attggcctgcgctttgctccaagtcagaaccccggcatggaagagattctcatcttcata aatgacaaacaggacaagaatgaggacacttactgtgttcgagtccagtacagataa

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