Danio rerio (zebrafish): 560257
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Entry
560257 CDS
T01004
Symbol
dcaf5
Name
(RefSeq) DDB1- and CUL4-associated factor 5
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
560257 (dcaf5)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
560257 (dcaf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EIPR1
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
WD40_RFWD3
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
560257
NCBI-ProteinID:
NP_001071020
ZFIN:
ZDB-GENE-060929-808
Ensembl:
ENSDARG00000060320
UniProt:
Q08BZ1
LinkDB
All DBs
Position
13:complement(39875288..39904795)
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AA seq
789 aa
AA seq
DB search
MKEARGCSMRSAVGFLSRRTIDGHPQLKEEFQRRRLSGCSSLYKKDMLGHFGCVNAIEFS
NNGGQWLVSGGDDRRVLLWHMEKAIHSRAKPMKLKGEHLSNIFCLAFDSTNKRVFSGGND
EQVILHDVERGETLNVFLHDDAVYGLSVSPVNDNVFASSSDDGRVLIWDTREPPHGEPFC
LANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPRSSLLRYGGSLSLQSAMSVRFN
STGTQLLALRRRLPPVLYELHSRLPSFQFDNQGYFNSCTMKSCCFAGDRDQYILSGSDDF
NLYMWRIPTDPEAGGAGRVVNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKVIKVWSP
YKQPDSLGDLEGLVEDKSRSLYTHEEYISLVLNSGTGLSHDYVSQSVQEDPRMMAFFDSL
VRREIEGWSSDSDSDLSEGAILQLHARARRSTRSTRSTPRSPAAVSAAHHSDSEHSSSSS
LAGPDVSGSERTDQDRSGSQRNRARPRASAFLLDLVNEDSDSSGFWLDPMPRPRSPSPRE
NSSLSSHASSAGVASSSSSSPSSSSSSSSSTDGVDEELRRSRMRQRNAARWRRHIGFSPR
DSAQTLHSATDSSNYPNISIHDQSSPSSSSGDEDRPFRNRGKQKPSPSHLSDRQSQSRCR
RRITSSFSGAGDGPLERAKSRAGFLAESGEELERGRTSGEELSTVEDLNLTLSSRTTVAG
VNGRPHIDENCGDSIHPECSGVELGKSAGDSRTQGEPSEREITSVAGKRTCSDSGDEDDS
PSEKRAKTW
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggcgcggggctgcagcatgcggagcgccgtcgggtttctctcccgcaggacg
atcgacggacacccgcagctgaaggaggagttccagcgccgcagactgtccggctgctct
agcctctacaagaaggacatgctcggacacttcggctgcgtcaacgccatcgagttctcc
aacaatggaggccagtggctggtgtccgggggagacgaccgcagggtgttgctgtggcac
atggagaaagcaatacactcacgggcaaaaccaatgaagctgaagggggagcacctgtcc
aacatcttctgcctggcgtttgacagcaccaacaagcgtgttttctcaggaggaaatgat
gagcaggtgattctgcatgacgtggaacgtggggagacgctcaatgtcttcttgcatgat
gacgccgtgtatggtctgtccgtcagtccggttaatgataacgtcttcgccagctcctct
gatgacggaagagttctcatatgggataccagagagccaccacatggagaaccgttctgc
ttggccaactacccctcagcatttcacagtgtgatgtttaaccctgttgagcctcgtctg
ctggccactgcaaactctaaagagggagttggactatgggatatccgcaaaccccgcagt
tctctgttgcggtacggaggcagtttgtctcttcagagtgccatgagtgttcgctttaac
agcacggggacgcagctgctggctctgcgcagacgtctgccacccgtcctctatgagctc
cactctcgtctgcccagcttccagtttgataaccagggctacttcaactcctgcactatg
aagagctgctgtttcgctggcgaccgagatcagtacatcttgtctggctctgatgatttt
aacctttacatgtggagaattcccactgaccctgaagcaggaggcgcgggtcgagtggtg
aatggggcctttatggttttaaaaggtcatcggtccattgtgaatcaggtccgctttaac
cctcacacgtacatgatctgctcctccggggtggagaaggtcatcaaggtttggagtccg
tataagcagccagacagtttaggagatctagaaggcctggtggaagacaagtctcgctct
ctctacactcatgaggaatacataagcctggtactcaacagcgggaccggcctgtcacac
gattatgtcagccagtcagtgcaggaagaccctcgaatgatggccttttttgactcactg
gttcggcgtgagatcgagggctggagctcggactctgacagcgatttgagcgagggtgcg
attctgcagctgcatgccagagcccggcggtcgacccgctccacacgatccacaccacga
tctcctgctgctgtgtctgccgctcatcatagcgactccgaacactcgtcttcatcttct
ctagcgggacctgatgtgtccgggagcgaacggacggatcaggatagaagtgggtcacag
aggaaccgggccagaccacgtgcgtctgcgtttctgcttgatcttgtgaacgaggattca
gattccagtgggttttggttagacccgatgccccgtcccagatcccctagcccacgtgaa
aactcaagtctttctagccacgcctcctcagcgggcgtagcctccagttcaagctcctcc
cccagctcatcttctagctcctcctccagcactgatggagttgacgaggagctgcgcagg
agcaggatgcgacagcgcaatgcagccagatggcgccgccatattggcttttctccaaga
gactcggcccaaacacttcacagcgccacagactcctccaactatcccaacatttccatc
cacgatcagtcgtccccctcttcgtcctcaggtgacgaagatcggcctttcagaaatcgt
ggaaaacaaaagccaagtccgtcgcacttatctgacaggcaatcgcagtccagatgtagg
cgccgcatcacttcttccttctcaggggctggggacggccctttggagagggcgaaatcc
cgagcaggctttctggcggagtctggggaggaactggagcgagggagaactagcggagaa
gagttgagtactgtggaggatttaaacctgacactcagcagtcggaccacagtggctggt
gttaacggacgtccacatattgatgagaactgtggagactctatacacccagaatgctct
ggggtagaactcggtaagagcgctggtgattccaggacccagggggagccctctgagcgg
gagatcaccagtgttgctgggaaacgaacttgttcggactcaggagacgaggatgattct
ccatcggagaagagggcgaagacgtggtga
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integrated database retrieval system
