Danio rerio (zebrafish): 560362
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Entry
560362 CDS
T01004
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
560362 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
560362 (dis3l)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
560362 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
560362
NCBI-ProteinID:
NP_001103928
ZFIN:
ZDB-GENE-070209-95
Ensembl:
ENSDARG00000053200
UniProt:
A2RV18
LinkDB
All DBs
Position
7:complement(34241319..34256374)
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AA seq
1057 aa
AA seq
DB search
MIKTEKILHLNSSKGRKVRVVREHYMREQVPCGSSLCQADCQNVGKVLSRDVTHYVVPDV
GVVRDFLEILELRELQGIVLTQTAYQTVQHTRGRRHYNRLRSLLKDPRHDCVLFANEFQQ
YSYCPREKGESQDKWHTRNVYNAAVWYYNHLAGLQPVVMITEDRDAISEFSASNSGVFVI
STQEYLLGFWPDLQAAHDLYHSIAQTLQERENDGAEKVYTEHLPAEVLEAGIKSGRYIQG
ILSVNKHRAQHEAFVRYEGSASKNTELNSDVLINGAKHRNRAVHGDVVVIELLPRNEWKG
RTMALTEGQGEERPLEDTQSQPMPTGRVVEILQRNWRDYVVTLPPFEEMQSQSRNSQKIL
VVPWDYRIPKIRISTQQAEALQDQRVIVRLDSWESTSVYPNGHFVRVLGKSGELETEIQT
ILVENCIHVPPFSEAQLREMPVNTEENPWQMDSNEVSSRRDLRDSHLVFSIDPKGCEDVD
DTLSVRTLPGGKRLELGVHIADVTHFVREGSLTDLEARSRATTYYLADRRYDMLPAVLSA
DLCSLLGGVDRYAMSVLWELDAETLEVCSVWFGRTLIRSSYQLHYELAQSLLNGEEVEVP
ELNPLKGSQRDQKMSELLQALETLTRVARHLRAQRDKGGALELEGVEVRAQLDEEKNITA
LVPKQPLEVHETVAECMIYANHWVARKIQESFPHHALLRHHPPPKQEFFNHLIDSAKAHG
FSIDTRSNRALADSLERAVDPRDPLVNRLLRMMATQAMSNALYFSTGSCPEEQYYHYGLA
LARYTHFTSPIRRYADVIVHRLLMAAVQLEKDESPSKALACNKELEELAQHINNKNRAAQ
HSQKQSIELFQCMYFRDKDSHTDERCVADAVIYAVRANGFLAFVPQYGLKGAVYLKDREG
QVISVDGDGKCEWKPGTLQKYSDKIITSTSTGTHTFYLFNHVTVRISVEPSRCHADSLNL
ELISNKPHCAVQPESQPAGGGRSGLVEEVVRWAEEASLQAEEQRGRKPKLSKEEKQFRQS
KTPNLYVLLQEISELALMDLSICQITNSEEQTCTVSS
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaactgagaagatattacatttgaacagctcaaagggtaggaaggttcgagtg
gtccgggaacattatatgagggagcaggtgccgtgcgggagctctctctgtcaggctgac
tgtcagaacgttggcaaagtgctgtctagggatgtgacccactatgtggtcccggatgtt
ggagtggttcgggattttctggagatcctggagctcagggagcttcagggaatcgtgttg
acccagacagcttaccaaactgttcagcacacccgtggacgcaggcattataaccgacta
cgttctttactgaaggatcctcgtcacgattgtgtgctctttgccaatgagtttcagcaa
tactcctactgccccagagaaaagggtgagtcccaggacaaatggcatacaagaaatgtg
tacaatgcagcagtttggtattataatcatctggctggactccaaccagtggtcatgatt
actgaagacagagatgctatttcagaatttagtgcttcaaacagtggagtttttgtcatt
tcaactcaggagtacctgttaggtttctggccggacctgcaagctgcacatgatctgtac
cactccattgcccagacgcttcaggagagagagaatgatggagcagagaaagtgtacact
gaacacctgcctgcggaggtgctggaagctggcattaaatctggaaggtacatccagggg
atcctcagtgtgaacaagcaccgtgcgcagcatgaagcctttgtccgttatgagggttca
gccagcaaaaatacagagctcaacagtgatgtgctaatcaatggcgcaaaacatcgcaat
cgagccgtgcatggagatgtggttgtcattgagctgttgccccgtaatgagtggaagggc
aggactatggcactaacagaaggtcagggggaggagcggccactggaggacacacagagt
cagcctatgcccacaggccgggtggtggaaattctgcagaggaactggagagactatgtt
gtgactttacctccttttgaggagatgcagtcccaaagccgaaattcacaaaaaattctg
gttgttccatgggactaccgaatccccaaaatccgtatcagcacacagcaggctgaggcg
ctgcaggaccaaagagtgattgtgcgtctggattcatgggaaagtacttcagtctaccca
aatgggcactttgtgagggttctggggaaatcaggcgagctggagactgagattcagacc
atactggtggagaactgcattcatgtgccaccattctcagaggcgcagctgcgagagatg
cctgttaatacagaggagaacccatggcagatggacagcaatgaggtttcctctcgccgg
gatttaagagactctcacctggtgttcagtattgatcctaaaggctgtgaggatgtggac
gacaccttgtctgtgcggactctgcctgggggaaaacggttagagcttggtgtccacatt
gctgatgtgactcactttgtcagagagggctctctaactgacctggaggcgaggtccagg
gcaaccacttactacctggctgatcgcagatatgacatgctgcctgcggtgctgagtgct
gacctgtgctctctgctgggaggggtggaccgatatgccatgagtgtgctgtgggaactg
gatgcggagactctggaggtgtgttcggtctggtttggccgtactctcatccgctcctcg
tatcagcttcactatgagctggcccagagcctgctgaatggggaggaggttgaggtacct
gagctaaacccactcaaaggctcacagagggaccagaaaatgtcagagctcctgcaggct
ctggagaccctgacgagggtggcaaggcacctccgggcgcagcgggataaaggtggcgct
ctggagttggagggggtggaagtgagggctcagctggatgaggagaagaacatcacagca
ctcgtgcccaaacagccactggaggttcacgagactgtggcagagtgcatgatctatgcc
aaccactgggtggcacgcaagatacaagagagctttccacatcacgctcttctgcgtcac
catccaccacccaagcaggagtttttcaatcacctgattgacagtgccaaggcccatggt
ttcagtattgatacaagatcaaacagagctttggctgattctctggaacgtgctgtggat
cctcgggaccccctggtgaacaggttgttgaggatgatggccacccaggcaatgtctaat
gccctttacttctctacgggatcctgtccagaggagcagtattatcactatggtcttgct
ctggctcgatacactcacttcacctctccaatcagacgatacgcagatgtaatagttcac
cggctgctcatggctgccgttcagctggagaaagacgaatcgccaagcaaagcgttggcc
tgtaacaaagagcttgaggagctggctcaacacatcaacaacaaaaacagagcagcgcag
cattcacagaagcagtccattgagctcttccagtgcatgtacttcagagataaagactca
cacacagatgagcgctgtgtggctgatgctgtcatctatgctgtcagagcaaacggcttt
cttgctttcgtgccacagtatggtttgaagggagctgtgtatctcaaggacagagaaggt
caggtgatcagtgttgatggagatggaaagtgtgagtggaagcctgggacattgcagaaa
tactcagacaagatcatcaccagcacgagcactggaacccataccttttacctttttaac
catgttacagttcgtatctctgttgaaccctcccgttgccatgccgacagcctaaatctg
gagcttatcagcaacaagccccactgcgctgtgcaacccgagtctcagccagctggtgga
ggacggtctgggctggttgaagaggtggtgcgctgggcagaagaagcctcgcttcaggcg
gaagagcagagagggaggaaacccaaactgagcaaagaggagaagcagttcagacagagt
aaaacacctaacctctatgtcctcttacaggagatcagtgaactcgctctgatggatctg
tccatctgccaaatcactaattcagaggaacagacttgcactgtgtcttcttag
DBGET
integrated database retrieval system
