Danio rerio (zebrafish): 560564
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Entry
560564 CDS
T01004
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C isoform X2
KO
K05450
platelet derived growth factor C/D
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04010
MAPK signaling pathway
dre04020
Calcium signaling pathway
dre04510
Focal adhesion
dre04518
Integrin signaling
dre04540
Gap junction
dre04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
560564 (pdgfc)
04020 Calcium signaling pathway
560564 (pdgfc)
09133 Signaling molecules and interaction
04518 Integrin signaling
560564 (pdgfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
560564 (pdgfc)
04540 Gap junction
560564 (pdgfc)
09142 Cell motility
04810 Regulation of actin cytoskeleton
560564 (pdgfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
dre04052
]
560564 (pdgfc)
Cytokines and neuropeptides [BR:
dre04052
]
Cytokines
Growth factors (RTK binding)
560564 (pdgfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF
CUB
Motif
Other DBs
NCBI-GeneID:
560564
NCBI-ProteinID:
XP_068069488
ZFIN:
ZDB-GENE-071217-2
Ensembl:
ENSDARG00000077588
UniProt:
A0AB32T266
LinkDB
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Position
14:complement(40165773..40464431)
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AA seq
265 aa
AA seq
DB search
MESSRIQLTFDPRFGLEDAEDGTCKYDYVEVEEPVGGMVLGRWCGSEMVPGPQLSKGNQI
LVRFVSDEYFPSDPGFSIRYSLLQQRQSEPEAPAVMPVWMQPVEDLTEAVSAFNTMEEVM
KYLEPERWQLDMDDLYKPTWQVLGKSFFHQKKSRGAVDLNLLREDVRLYSCTPRNFSVSL
REELKRTDAIFWPSCLLVKRCGGNCACCSYNCYDCQCSPTKVAKKYHEVLMLKHRTGGRG
LQKTLADVPLEHHEECNCVCKNDSD
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggaaagttccaggatccagctgacctttgacccacgcttcggcctggaggacgcggag
gacggcacttgcaagtatgattatgtggaggtggaggagcctgttggagggatggtgtta
ggtcgttggtgtggatcagagatggttccgggaccccagttgtccaaggggaaccaaatc
ctggttcgctttgtctctgacgaatactttccctcagacccaggattcagcatccgctat
tctttgcttcaacagaggcagtcggagcccgaggccccagcggtgatgcctgtgtggatg
cagcctgtggaggatctgactgaagccgtgtctgcgttcaacaccatggaggaggtgatg
aagtacctggagcccgagcgctggcagctggacatggatgacctctacaaacccacctgg
caggtgctgggcaaatccttcttccaccagaagaaatccagaggagcggtggatctgaat
ctgcttcgtgaggacgtgcggctctatagttgcactcctcgtaatttctcagtgtctttg
cgcgaggagctgaaaaggacagatgctatcttctggcccagctgcctgctggtgaagcgc
tgtggtggaaactgcgcctgctgttcttacaactgctacgactgccagtgctcacccacc
aaagtggccaaaaaatatcacgaggttctgatgctgaagcacaggacagggggtcgggga
ctgcagaaaaccctagcagacgtccctctggagcaccatgaggagtgtaactgtgtgtgt
aaaaatgactctgactaa
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