Danio rerio (zebrafish): 560564
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Entry
560564 CDS
T01004
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C isoform X3
KO
K05450
platelet derived growth factor C/D
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04010
MAPK signaling pathway
dre04020
Calcium signaling pathway
dre04510
Focal adhesion
dre04540
Gap junction
dre04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
560564 (pdgfc)
04020 Calcium signaling pathway
560564 (pdgfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
560564 (pdgfc)
04540 Gap junction
560564 (pdgfc)
09142 Cell motility
04810 Regulation of actin cytoskeleton
560564 (pdgfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
dre04052
]
560564 (pdgfc)
Cytokines and neuropeptides [BR:
dre04052
]
Cytokines
Growth factors (RTK binding)
560564 (pdgfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Neur
Motif
Other DBs
NCBI-GeneID:
560564
NCBI-ProteinID:
XP_021328547
ZFIN:
ZDB-GENE-071217-2
Ensembl:
ENSDARG00000077588
UniProt:
A0A8M9PBW1
LinkDB
All DBs
Position
14:complement(35567321..35853680)
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AA seq
305 aa
AA seq
DB search
VHESQHEKVLSVTGDGIIQSPNFPNKYPRNTVIVWQLVAVMESSRIQLTFDPRFGLEDAE
EGTCKYDYVEVEEPVGGMVLGRWCGSEMVPGPQLSKGNQILVRFVSDEYFPSDPGFSIRY
SLLQQRQSEPEAPAVMPVWMQPVEDLTEAVSAFNTMEEVMKYLEPERWQLDMDDLYKPTW
QVLGKSFFHQKKSRGAVDLNLLREDVRLYSCTPRNFSVSLREELKRTDAIFWPSCLLVKR
CGGNCACCSYNCYDCQCSPTKVAKKYHEVLMLKHRTGGRGLQKTLADVPLEHHEECNCVC
KNDSD
NT seq
920 nt
NT seq
+upstream
nt +downstream
nt
gagtgcacgagtctcaacacgagaaggtcctcagtgtcactggggatggaattattcaaa
gtcctaactttcccaacaaatatccccgaaatactgttatagtgtggcaactggtggcag
tcatggaaagttccaggatccagctgacctttgacccacgctttggcctggaggacgcgg
aggaaggcacttgcaagtatgattatgtggaggtggaggagcctgttggagggatggtgt
taggtcgttggtgtggatcagagatggttccggggccccagttgtccaaggggaaccaaa
tcctggttcgctttgtctctgacgaatactttccctcagacccaggattcagcatccgct
attctttgcttcaacagaggcagtcggagcccgaggccccagcggtgatgcctgtgtgga
tgcagcctgtggaggatctgactgaagccgtgtccgcgttcaacaccatggaggaggtga
tgaagtacctggagcccgagcgctggcagctggacatggatgacctctacaaacccacct
ggcaggtgctgggcaaatccttcttccaccagaagaaatccagaggagcggtggatctga
atctacttcgtgaggacgtgcggctctatagttgcactcctcgtaatttctcagtgtctt
tgcgcgaggagctgaaaaggacagatgctatcttctggcccagctgcctgctggtgaagc
gctgtggtggaaactgcgcctgctgttcttacaactgctacgactgccagtgctcaccca
ccaaagtggccaaaaaatatcacgaggttctgatgctgaagcacaggacagggggtcggg
gactgcagaaaaccctagcagacgtccctctggagcaccacgaggagtgtaactgtgtgt
gtaaaaatgactctgactaa
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