Danio rerio (zebrafish): 560788
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Entry
560788 CDS
T01004
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03410
Base excision repair
dre04210
Apoptosis
dre04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
560788 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
560788 (parp1)
04217 Necroptosis
560788 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dre03032
]
560788 (parp1)
03036 Chromosome and associated proteins [BR:
dre03036
]
560788 (parp1)
03400 DNA repair and recombination proteins [BR:
dre03400
]
560788 (parp1)
Enzymes [BR:
dre01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
560788 (parp1)
DNA replication proteins [BR:
dre03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
560788 (parp1)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
560788 (parp1)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
560788 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
PADR1_Zn_ribbon
BRCT
BRCT_2
DUF5588
Motif
Other DBs
NCBI-GeneID:
560788
NCBI-ProteinID:
NP_001038407
ZFIN:
ZDB-GENE-030131-3955
Ensembl:
ENSDARG00000019529
UniProt:
Q5RHR0
A0A8N1TQ38
LinkDB
All DBs
Position
20:43648438..43689779
Genome browser
AA seq
1013 aa
AA seq
DB search
MADSQDDKLYKAEYAKSGRASCKKCKDNIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RAAVQSPSDISGFTDLRWDDQEKVKTAIESGGATGGKGGQKGAAKGEKTLNDFAVEYAKS
NRSTCKGCDQKIEKDQIRVSKKTVDPEKPQLGLIDRWYHTGCFVSRREELIFKPEYSAAQ
LKGFAVLRDEDKEELKKRLPAVKSEGKRKADEVDGGVSKKQKKEDEKLEQNLKDQSQLIW
GIKDKLKKFCSINDMKELLIANSQEVPSGESNIVDRLSDCMAFGSLKPCETCKGQLVFKS
DAYYCTGDISAWTKCVFKTQTPDRKDWVTPKEFSEIPFLKKFKFKRQDRVFPKDAPPAAA
TPSSGSTTSAATSVSSASKNLTEAPADKPLTGMKLLAVGKLSKNKDDLKKFVEDLGGKIT
GTASKAALCISSKKEIEKMSKKMEEVRDAGVRVVADDFLTDIKESGKALQELISLHAISP
WGAEVKVEAPAAAAATKSTGAHSSKSTGKVKEEEGGSKSKKMKLTVKGGAAVDPDSGLEN
CAHVLEQNGKIYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGGNKL
DKFYDKNSAMDNFCGVYEEKTGNAWASSNFTKYPNKFYPLEIDYGQDEEAVKKLTQSAGA
KSQLEKPVQDLIRMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSLLSEVQQAVA
DSSSESLILDLSNRFYTLIPHDFGMKKPPLLSNVDYIQQKVQMLDNLLDIEVAYSLLRGG
VENNEKDPIDINYEKLKTKIEVVDKSSHEAQLILQYVKNTHAATHNTYTLDVEEIFKIER
EGEYQRYRPFKELPNRQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGKGVYFADMV
SKSANYCHTSQADPVGLILLGEVALGNMHELKKASHITKLPKGKHSVKGLGRSAPDPRAT
VSLNGVDIPLGKGMNTNIDDTSLLYNEYIVYDVSQVNLKYLLKIRFNYQTSLW
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggccgactcacaggacgacaagctgtacaaagccgaatatgcaaaaagcggacgcgcc
tcatgcaagaaatgcaaagacaacattgctaaggactcgctgaggatggccatcatggtg
cagtctcccatgtttgatggcaaagtccctcactggcaccatttttcttgcttttggctc
cgggccgcagttcagtctccttctgatatatctggatttactgacctccgctgggatgac
caagagaaagtgaagacagccattgagagtggaggtgctacaggagggaaaggaggacag
aagggagcggctaaaggagagaagacgctgaatgactttgcagtggagtatgctaaatcc
aacagaagcacctgcaagggctgcgatcagaaaattgaaaaggaccagatccgtgtgtcg
aagaagactgtggacccagagaaacctcagcttggtctaatcgatcgctggtaccacacc
ggctgctttgtgagtcgtcgggaggaactgatatttaaaccagagtacagcgctgcccag
ctcaaaggattcgcagttctacgagatgaagacaaagaggagctgaagaaacggcttcct
gctgtgaagagcgaaggaaagagaaaagctgatgaagtagatggaggagtctctaaaaaa
cagaagaaagaagatgaaaaactagagcagaatctgaaggatcaaagccagctgatctgg
ggaattaaggacaagctgaagaagttctgctccatcaatgacatgaaggaactgctaatt
gctaacagtcaggaagttccttctggggagtcaaatattgtggatcgactatcagactgc
atggcatttgggtccctgaagccttgtgagacttgcaaagggcagcttgtgtttaaaagt
gatgcgtattactgtactggagacatctctgcgtggactaaatgtgtattcaagactcag
acgcctgatcgcaaagactgggtcacccctaaggagttcagtgagatcccgttcctgaag
aagtttaagttcaagcgacaggaccgtgtgtttcctaaagacgctcctcccgctgctgcc
actccatcatctggttctaccacttcagctgccacaagtgtgtccagcgccagtaaaaac
ctcactgaggcacctgcagataagcctctgactggaatgaagctcctggctgtgggaaag
ctcagtaagaacaaagatgatctgaagaaatttgtggaagatctgggaggaaaaatcaca
ggcacggccagcaaagctgctctctgcatcagcagcaagaaggagattgagaagatgagt
aagaaaatggaggaggtgagagacgcaggtgtccgcgtggtggctgatgatttccttact
gacatcaaggagtccggcaaggcccttcaggagctcatctctctgcatgccatttccccc
tggggcgctgaagttaaagtcgaggccccggctgcagccgcggccaccaaatccaccgga
gctcattcctcaaagagcaccggcaaagtcaaagaggaggaaggtggaagcaaatcaaag
aaaatgaagctgacagtgaaaggaggagctgcagtagatccagattcaggtctggaaaac
tgtgctcatgttctggaacagaatggaaagatttacagcgccacactgggtctcgtggac
atcgtcagagggacaaactcatactacaaactacagctgctggaggatgacgttcaaaag
cggtactgggtgtttagatcgtggggtcgagtcgggaccaccattggaggaaacaaattg
gacaagttttacgataagaactctgctatggacaatttctgtggtgtgtatgaggaaaag
acagggaatgcttgggcctccagcaacttcacaaagtaccccaataagttttaccctctg
gagattgactacggacaggatgaggaggctgtgaagaagttgactcaaagtgcaggtgcc
aaatctcagctggaaaaacctgtgcaagacctcatccgaatgatcttcgatgtggagagc
atgaagaaagccatggtggagtttgagattgacttgcagaagatgcctttgggaaaacta
agcaagcgacagatccagagtgcttattcccttctaagcgaagttcagcaggctgtggca
gatagctcctcagaatcactgatcctagatctgtctaatcgcttctacacactgataccg
cacgacttcggcatgaagaaaccaccactattgagtaatgtggattacatccagcaaaag
gtgcagatgctggacaaccttttggacatcgaggtggcctacagcctgcttcggggagga
gtggagaacaacgaaaaagatcccattgacatcaactatgagaaactcaaaaccaaaatt
gaggtcgtcgacaagtcttcacatgaggctcagcttatccttcaatatgtgaagaacaca
catgctgctactcacaacacctacacactggatgttgaggagatctttaagattgagagg
gagggcgagtatcagcgttatcgccccttcaaagagttacccaaccgccagctgctgtgg
cacggctcgcgcaccaccaactatgctggtattctgtctcagggtctccgcatcgctcct
ccggaggccccagtgacgggttacatgtttggcaaaggtgtttactttgctgatatggtg
tcgaagagtgccaactactgccacacgtctcaggctgatcctgtgggcctcattctgtta
ggagaggttgcattagggaacatgcatgaactgaagaaagcctcacacattacaaagcta
ccaaagggtaaacacagtgtaaaaggtttgggaagaagtgctccagacccaagagctaca
gtatctctcaatggagtggacattcctctgggcaaaggcatgaacacaaatattgatgac
acaagtctgctctacaacgagtacatcgtttatgatgtttctcaggttaacctgaaatac
ctgctgaagatccgcttcaactatcagacgtctctgtggtga
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integrated database retrieval system
