Danio rerio (zebrafish): 560837
Help
Entry
560837 CDS
T01004
Symbol
sin3b
Name
(RefSeq) paired amphipathic helix protein Sin3b
KO
K23213
paired amphipathic helix protein Sin3b
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
560837 (sin3b)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
560837 (sin3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
HHD_RTEL1
PAH_ZNF598
At4g15545_C
mTOR_dom
UL21a
Band_3_cyto
Motif
Other DBs
NCBI-GeneID:
560837
NCBI-ProteinID:
NP_001038410
ZFIN:
ZDB-GENE-030131-8264
Ensembl:
ENSDARG00000062472
UniProt:
Q1LYM8
LinkDB
All DBs
Position
8:complement(15973957..16001694)
Genome browser
AA seq
1196 aa
AA seq
DB search
MAKIQAHSSTAKQINQIQDKAYVVQKQVQQQHFQKLKVEDALSYLDQVKIRFGNDPGIYN
KFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEIPKNGMAFLQSP
FSSQVSPGAGRSTGSSVVSASSSAVVEAAGPAQNEAVTSPESIASSSGPPEQSSKLSLPL
PNRESQSQPAATSVSPPTSEPSPVEFDSAISYVNKIKNRFLDNPETYRAFLEILHTYQKE
QLEVKESRGRSTGGMTEDEVFSKVASLFKGQEDLLAEFGQFLPDAKRSLFTGGSLPLKKV
EEEELNKQTKKRPRPMLLPHMTPLLKKKMKYSCSKDPSFASVGKHGVLREFTFFDKVRRL
LKSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYTQFKSFLGDKELSHVISG
LSDRYMEGGGREVDYASCKRLGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSE
DSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRLSLEDQERFRL
DDCLGGTSEVIQRRAVYRIYGDKAPEIIEGLKRSPATAVPVVLKRLKAKEEEWREAQQGF
NKIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIESIYDERQEQSTEEGSVGQQ
GRDGTSTASTSEPHMIFNYEDKQILEDAASLIIYHVKRQPTIHKDDKDHIKRIIQHFAPD
LFFARRGELSETEEFTDEEGEGEDGAAAGGGVSSTGQQQLNGESRRRRCTSPQSMDTSTV
AHSINPEGEAVDLRDPEAEHQKEMDGVYNLFFVNNNWYFFLRLHQTLCSRLLKIYRQAER
QLLEHRAEQNRERLLMGEGRREKANDLAMELRLKQPSEVELEEYYPAFLDMVRSLLDGNL
ESTQYEDTLREMFTIHAYIGFTIDKLIQNIVRQLQHLVSDEVCLQVTELYLAERKRGAAG
GNLSSQCVRAAWEASYQWKAERVMAEENCFKVMFIQNKGQVTLTIELLDTEEAQGDDPLD
VQSLSNYMEQYIGTETLCSQAEGYYFKPVFLPRNVRHFRGWQIKQVEAMRCRREWHRKMG
VETAGNLDCRFKLNTHKMVFVMNSEDYMYRRGALVKARRSQHRVARAQHERFEQWHRGWL
SEHVSPAAERSVQDWLMGEEDEDMIPCKTNCVSLQVKGLHVNRYQVHYNSKAPASP
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagattcaggctcacagcagcactgcgaagcaaatcaaccagatccaagacaag
gcctatgtggttcagaagcaagtccagcagcagcactttcagaaactaaaggtagaggat
gccttatcttacttggaccaagttaaaatacggtttggaaatgatccaggaatctacaat
aagtttttggatatcatgaaagaatttaaatcgcaaagcattgacacaccaggagttatc
aacagagtttcccagctcttccatgggcacccggaccttgtcctgggatttaatgcattt
ctaccgcctgggtatcggattgaaattcccaagaatggaatggcatttcttcaatcccca
ttttcctcgcaggtttctccaggagcaggacggagtacaggcagttctgtcgtcagtgcc
tcttcatcagcagtggttgaggcagcagggccagctcagaatgaagctgtgacctctccg
gagagcattgcttcatcttcgggacctcctgaacagtcaagcaagttgtcacttcctcta
cccaaccgagagagccaatcacagccagcggccacatctgtgtcccctcccacttccgag
cccagccctgtggagtttgacagcgccatcagctacgtcaataagatcaagaaccgattt
ttggacaacccagaaacctaccgggcttttttggaaattctgcacacataccagaaggag
cagctggaggtgaaggagagcagaggtcgcagcactggaggaatgactgaagatgaggtt
ttctctaaagtggccagtcttttcaaagggcaagaggatctgctcgccgaatttggccag
tttttacctgatgcaaagagatctttgttcactggaggttctttgccgctgaagaaagtg
gaggaagaagaactgaataaacagaccaagaaaagaccaagacccatgctactgccccac
atgaccccactcctaaagaaaaaaatgaagtattcctgttccaaagacccatcttttgcc
tctgttggaaaacacggagtcttgcgggaattcacgttctttgacaaggttcgtcgtcta
ctcaaaagtcaggaggtgtacgagaatttcttgcgctgcatagccttgttcaatcaggaa
gtggtttcgggagccgaactcctgcagcttgtgactccattcttagggaagtttccagaa
ctgtacacccagtttaagtcatttttgggtgataaagagctgtctcatgtcatctcgggg
ctctccgaccgctacatggagggtggaggcagagaagtggattatgcctcctgtaaacga
ctaggctcaagctacagagccctgcccaagacataccaacagcccaaatgcagcggccga
actgctatatgcaaagaggtgctgaatgatacatgggtctcattcccttcctggtctgaa
gactcaacttttgtgagttccaagaaaacaccatatgaagagcaacttcatcgctgtgag
gatgagcggtttgagctggatgttgtgctcgagaccaatttggcaacgataagagtattg
gaaagcgtgcagaaaaagctatcccgcctttcactagaggatcaagagcgtttccgattg
gacgactgcctgggtggcacttccgaagtcatccaacggcgtgcagtctatcgcatatat
ggcgataaagcaccagagatcatagaggggttgaagaggagtccagccactgcagttcct
gttgtactcaaacgtttgaaagcgaaagaagaggagtggagggaggcccagcagggtttc
aacaaaatctggagagagcagtacgagaaggcgtatctgaaatcactggaccatcagggt
gtcaacttcaaacaaaacgacatgaaggccctccgatccaagagtcttctcaatgagata
gagagcatttatgatgagcggcaggagcagagcacagaagagggcagcgtgggccagcaa
ggccgtgacggcacgagcacagcgtcaaccagcgaaccccacatgatctttaactatgag
gacaaacagatcctggaggacgccgcttccctcatcatctaccacgtcaagcggcagccc
accatccacaaggacgacaaggaccacatcaagcgcatcatccagcacttcgccccagac
ctcttcttcgcccgtcgtggagagcttagcgagactgaggagttcacggatgaggagggc
gagggggaagacggtgcggccgcaggaggtggagtgtcatccacaggacaacaacagctg
aacggcgagtccagaagacgacgatgcacttctcctcaaagcatggacacgtcaacagtg
gcccacagcattaatcccgaaggagaggcggtggatctgagggacccagaggctgagcat
cagaaggagatggatggggtctacaacttgttcttcgtcaataataactggtatttcttc
ctgcggctgcaccagactctgtgctcgcggctgctgaagatttacaggcaggccgagaga
cagttgctggagcaccgggccgaacagaaccgggaacggctactcatgggagagggacgc
agggaaaaggcaaacgacctggccatggagctccgtctaaagcagccgagtgaggtagag
ttagaggaatattatccagcattcttagacatggtacgcagtcttctggatggaaacctg
gagtctacccagtatgaggacacgctgagagaaatgttcaccatccacgcttacatcggc
tttaccatcgacaagctcattcagaacatcgtaagacagcttcagcacctggtcagtgat
gaggtgtgtctacaagtcactgagctgtacctggcggagaggaagagaggagccgccggt
gggaatctctcatcccagtgtgttcgtgccgcatgggaagccagctatcagtggaaggct
gagagagtcatggctgaggagaactgcttcaaggtcatgtttattcaaaacaagggtcag
gtgaccttaaccattgagctattggacacagaggaagcccagggcgatgatccactggac
gttcagagcctgtctaattacatggagcagtatattgggactgagactctgtgctctcag
gctgaaggctactacttcaagcctgtgtttctgcccaggaatgtgagacatttccgtggc
tggcagatcaagcaggttgaagccatgcgctgccggagagagtggcatagaaagatgggt
gtagagacagccggaaacctggactgccgattcaaactgaacacacacaagatggtgttt
gtgatgaactccgaggactacatgtaccgccgaggagccctggtgaaggctcggaggtct
cagcacagagtagcgagggctcagcacgagcgctttgagcagtggcaccggggctggctg
agtgaacacgtgtctcccgccgccgagcgcagtgtgcaggattggctcatgggagaagag
gatgaggacatgataccctgcaagaccaattgtgtgtccctgcaggtcaaaggcttgcat
gtcaacaggtaccaggtgcactacaacagcaaggcccccgcctcgccgtaa
DBGET
integrated database retrieval system
