Danio rerio (zebrafish): 560875
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Entry
560875 CDS
T01004
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04010
MAPK signaling pathway
dre04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
560875 (cacna1ha)
04020 Calcium signaling pathway
560875 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
560875 (cacna1ha)
Ion channels [BR:
dre04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
560875 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
560875
NCBI-ProteinID:
XP_009297960
ZFIN:
ZDB-GENE-130103-1
Ensembl:
ENSDARG00000060496
UniProt:
A0A8M3B162
LinkDB
All DBs
Position
3:39759426..39953920
Genome browser
AA seq
2300 aa
AA seq
DB search
MTDGEGKEHFQYLEREEVRIPISALYQAPGPTEETGDEEEKSSTWIPVHESSQARGSGAR
DPTPDLVSNEEEQPLYPLLAPVVFFCIKQTTRPRSWCLKMVCNPWFEHVSMLVILLNCVT
LGMYQPCEDLKCQSEWCIVLQAFDDCIFAFFAVEMVIKMIALGIFGINGYLGDTWNRLDF
FIVMAGMMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLL
CFFVFFIFGIVGVQLWAGLLRNRCFMPSKVRDQYNLSYMSLYYENEDGEDNPFICSSSKD
NGMKRCSAVPPLKEGVECTLNASFLGHVYSGLSGTGNYSCVNWNQYYSECKPGDLNPHKG
AVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVV
IATQFAETKQRENMLMKEQRARYRSNDSTLASYSEPGSCYEEMLKYVSHLYRKVKRRLSR
IYNSWQSKRRKKVNPNTGAGGGANGHSRHRGYGHWVQSIHSLIQQHQRQHCHLSNGSPSP
VATTGSSEALEMRSITAGQQLTVSSQPTATHNLSSSTQSVHSIYQGDFREAPQERTPTNV
AVPALSRLNGGMNYPTILPSLICNYSGGGSLGKERGKSDANTGHEVIQDFDKLHQQIEAH
SHSRVLLQMAGVVPTQLLLEVMSCPYCVRALESMDLEIGDSDYPRSEGDMVYEFSYDAGF
ITGRSAHHKMQEKQNRLVQFWEDFRERLTRIVDSKYFNRGIMIAILINTLSMGIEYHEQP
EELTNILEISNIVFTSMFVLEMLFKLLAFGIFGYIRNPYNIFDGVIVVISVWEIIGHADG
GLSVLRTFRLLRVLKLVRFLPALRRQLLVLMKTMDNVATFCMLLMLFIFTFSILGMHLFG
CKFSLKMENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWAALYFVAL
MTFGNYVLFNLLVAILVEGFQAEGDANKSDGDEEKTSVNSEEKMEQLQSSDLKFYSLMLS
ANGHVDPCGTLPPPIIMRTAATPMPTPKSSLGPESVFDLTESRRGSAVSIDPNAFDQKSL
SSPRRSPCHPRGSGSNWGSRRSSWNSLGRAPSLKRKDTSGERESLLSGEGRGSFEDDDIE
AEKLTNISGGSLQHPSSLDIPELPQMGEYLDCNGRSQHILADLSASLNKEDSIAEEDLDD
SFCFRLRRTLAAYKPKWCKDHEEWSLYLFSPHNKFRMMCQKLISHKMFDYVVLVFIFLNC
ITIALERPHIQQSERLFLLVSNYVFTVIFVAEMTVKVVALGFYSGNQSYLKSTWNVLDGV
LVFVSLIDILVSLAWTGNRIFGILRVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIG
NIVLICCAFFIVFGILGVQLFKGKFFHCEGGDTRNITNKSDCLQANLKWIRRKYNFDNLG
QALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPERNHNPWMLLYFISFLLIVSFFVLNMFV
GVVVENFHKCRQDQEEVEARLLELKRQKLMEKKRRSKENCGSEALRRPYYADYSPARLYI
HTLCTNHYLDLFITGIICINVVTMSIEHFNQPSYLDEALKYCNYVFTIIFIIEALLKLVA
FGIRRFFKDRWNQLDLAIVLLSIMGITLEEIKMNAALPINPTIIRIMRVLRIARVLKLLK
MATGMRSLLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFGKLECTENNPCEGLSPHAT
FENFGMAFLTLFRVSTGDNWNGIMKDTLRECLPSETQCLSYLPWVSPIYFVTFVLMAQFV
LVNVVVAVLMKHLEESNKEAKEDAEMDAAIKLAILKETRRLSTISASATAGPEGRATYIE
PHPDSPEQDEGMQRTQGNLLSPRKMSVSRMHSLPNDSYMFRPVRPASAPYPLEEVETCQD
YLELGSITSVHSQPCESLSLLQVPGVPPHSQFNCLPKIPPPMPSPTHSIDRILRRQRAIK
NDSIDMHNFDSKENVERQKGITTGSFKLHVPQITGISQGSPLLPPRGPSVHTFQQPHSQH
NISSRPPSLASSSRSTSPSGSMFDSADPTDEEVRHINSTARLWIGVHAEARSHSLSPYST
SGTLLPIPVKNCSSAANLTIKDPKKCFSVDTEGFLERPYASDDHRRHSIEICSSGDDGLF
GQELCEKRHVPTRGKSLHIPRKTKMSPPCISIEPPFEKDVSPSHASMKKLSDSMLLRRRT
PSYDLALQRDSLDLPENQLSTQPLIKVERHPSHCAEYLSLPHPAPMSGLAGVLCESTQPP
PFDSRYEESTDFGSVNRTAQ
NT seq
6903 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggggaaagaacactttcagtacttggagagagaagaggtaagaatt
cccatttcagccttgtaccaggcgcccggtcccactgaagagactggcgatgaagaggaa
aaaagcagcacatggatccccgtccatgagagctctcaggcacgggggtccggggcccgg
gaccctaccccagatttggtttccaatgaagaagaacagcccctctacccgttgcttgca
cctgtggtgtttttctgtatcaaacagaccactcgtccacggagctggtgtctcaagatg
gtttgcaacccatggttcgagcatgtgagcatgctggtgattctgctgaactgtgtgact
ctgggcatgtatcagccatgtgaggacctcaagtgccagtctgagtggtgtatcgtcctg
caggcgtttgatgactgcatcttcgccttcttcgctgtggagatggtcatcaaaatgatc
gccctggggatttttggaataaatggttatcttggcgacacgtggaaccgcctggacttc
ttcattgtcatggcagggatgatggagtattcactggacggtcataacgccagcctgtca
gccatccggactgtgcgagtgctcaggcccctgcgagccatcaacagagtgcccagtatg
aggatactggtcactctgcttctagatactctgcctatgttaggcaacgtcctcctgctg
tgcttttttgtcttctttatattcggaattgtcggggtgcagctgtgggctggacttctt
aggaatcggtgtttcatgccaagcaaagtgagagaccaatataatctgtcgtatatgagt
ctgtactatgagaacgaagatggtgaagacaaccccttcatctgctcctccagtaaggac
aacggcatgaagcgctgcagtgctgtgccaccccttaaagagggtgttgagtgcacttta
aatgcatcttttctgggacatgtctactctggcctgagcgggacaggcaactacagctgt
gtgaactggaaccagtattacagtgaatgcaagcccggagacttaaacccgcacaaaggc
gcagtaaactttgataacattggatatgcctggatcgctatattccaggttattacattg
gaaggatgggtggacatcatgtattacgtaatggatgcccactccttttacaattttata
tattttatattgcttattatagtgggttccttcttcatgatcaacctgtgcctggttgta
atagcaacccagttcgcagaaaccaaacagcgcgagaacatgctgatgaaggagcagcgt
gcacgataccgctccaacgacagcaccctcgccagctactctgagccgggcagctgctac
gaagagatgctcaagtacgtcagccacctgtaccgcaaggtgaagcgccgcctctcccgc
atctacaacagctggcagagcaagcggcgaaagaaagtgaaccccaacaccggggctggc
ggaggtgccaatggtcacagtaggcacaggggttacggacactgggtacagtccattcac
agcctcatccagcagcaccagcgacagcactgtcacctcagcaatggcagccccagtcct
gtggccactacgggctccagtgaggctctggaaatgaggtccatcacagcgggtcagcag
ctgaccgtgtcctctcagccaaccgccacgcacaatctttcttccagcacacaatcagtg
catagcatttatcaaggtgactttcgtgaggccccgcaggagcgaacacccactaatgtt
gctgttccggcactcagccgactcaatggggggatgaactatcccacaattttgccgtcc
ctcatttgcaactattcaggtggaggttcattagggaaagagagggggaagtcggatgca
aatacaggacatgaggtgatacaggactttgacaagctgcaccagcaaattgaagcacat
agccacagtcgtgtgctgctgcagatggctggtgtggtgcccactcaattacttcttgag
gtcatgagctgcccgtattgcgtaagggcccttgagagcatggatctggagattggtgat
tcagactaccctcgatcagaaggggacatggtgtatgagttctcatatgatgccgggttc
ataaccggccgttcagcacatcataaaatgcaggagaaacaaaaccgtctggttcaattc
tgggaggacttcagggaaagactgacccgtatagtggatagcaaatactttaaccgggga
attatgatcgccatcctcatcaacaccttgagtatggggattgaataccatgagcagccc
gaggagctgaccaacatcctggagatcagcaacatcgtcttcactagcatgtttgtcctc
gaaatgctcttcaaactgctggcctttggcatcttcggctatataaggaacccatataac
atctttgatggggttattgttgtcataagtgtatgggagatcatcggtcatgcggatggt
ggtctctcagtgctgaggacttttcgtctcctgagggtgctcaaactggtgcgcttcctc
cctgccctgcgcagacagctgcttgtcctgatgaagaccatggacaatgtggcaacattt
tgcatgctactcatgctcttcatcttcactttcagcatactcggaatgcatctgttcgga
tgcaaattcagcctgaagatggagaatggagacactattccggacaggaaaaactttgat
tccctgctgtgggccattgtcactgtgtttcagattctgacccaggaagactggaacgtg
gtcctctataatggaatggcttccaccagcccatgggcggctctttattttgttgccctc
atgacgtttgggaattatgtgctctttaatctactggtggccattttagtggaagggttt
caggcggagggagatgctaacaagtcagacggagatgaggaaaagacatcagtgaactct
gaagagaaaatggagcagctgcaaagttcagacttgaagttctactctctgatgttgtca
gccaatgggcatgtggatccttgtggcactttgcctccaccaatcatcatgcgcactgct
gccacacccatgcccactccaaagagctctctggggcccgagtctgtgtttgacttgacc
gagtccagacggggcagtgctgtctccatagatccaaatgcttttgatcagaagtccctg
tccagtccaagaagatcaccatgccacccccgtggctcgggcagtaactggggcagccgc
aggtcgtcctggaacagcttaggacgagcgccaagtctgaaaaggaaggacacatctggg
gagcgcgagtctctgctgtccggggaaggcaggggcagctttgaggatgacgacatagag
gcggagaagctgactaacatcagcggaggctccctgcagcaccccagctctctggacatc
ccagaactgcctcaaatgggggaatacctcgactgcaatggacgaagccaacacatactc
gctgacctgtctgccagtctcaacaaggaggactccatcgctgaggaggacttggatgat
agcttctgtttccgtctcaggaggaccctggcagcttataaacccaagtggtgcaaagat
catgaggaatggtcactttacctgttctctcctcataacaagtttcggatgatgtgtcaa
aaactcatctctcacaagatgtttgattatgtagttttagtattcatcttcctaaactgc
atcactattgctctggagagaccccatattcaacaatctgagcgattatttctcctcgtc
tcaaactatgttttcactgtgatatttgttgctgaaatgacagtgaaggttgtggccctt
ggtttctactccgggaaccagagttatctaaagagcacatggaatgttttggatggggtg
ctggtctttgtgtccctcattgacattctggtctctctggcctggactggaaaccgaatc
tttggcatcctgagggttcttcgcctgctgcgaactctgcggccactgagagtaattagt
cgtgctcctggtctgaagctggtagtagaaacgttgataacgtccctgaggcccattggg
aacattgtgctgatctgctgtgctttctttattgttttcggcattcttggagttcagctc
ttcaaaggaaagtttttccactgtgaaggcggcgataccagaaacatcaccaataagtct
gactgtcttcaggcaaacctcaaatggatcagaagaaagtacaattttgacaacttggga
caggctctcatgtctcttttcgtgctttcctgtaaggatggatgggtcaatataatgtat
gatgggttggatgctgttggtgtggaccagcagcctgagcgcaaccacaacccctggatg
ctgttatattttatttcctttctgctaatcgtcagcttcttcgtcctgaatatgtttgtc
ggagtagtggtggaaaacttccacaagtgccgtcaagaccaggaggaagtggaggcgcgt
ctgctggagttgaagaggcaaaaactgatggagaaaaagcgcaggagtaaggagaattgc
gggtctgaggcactccggagaccatattatgctgactattctccagcccggctttacatc
cacacactgtgcaccaaccactatttggacctgtttataaccggcatcatctgcatcaac
gtagttaccatgtccatcgagcatttcaatcagccttcttatcttgacgaggcacttaaa
tactgtaactatgtatttacaatcatcttcataattgaggctctgcttaaactcgtggca
tttggaatacggagattcttcaaagacagatggaaccagctggatcttgcaatagtccta
ctctctatcatgggcatcactctggaggagattaagatgaatgcagcgctgcccatcaac
cccaccatcatccgtattatgagagtgctaagaatcgcaagagtgctgaagctgttaaag
atggctacaggcatgagatccctactcgacaccgtaatgcaagctttaccacaggtggga
aatctgggcttgctgtttatgcttctcttcttcatttatgcggcgcttggcgtggagctt
tttgggaaactagaatgcacagagaacaatccgtgtgaaggattaagtccacatgccacg
tttgagaactttggaatggcatttttgacacttttccgagtatcaactggggacaattgg
aatggaataatgaaggacactctgcgagagtgccttccttcagagacgcaatgcctcagc
tatctaccctgggtctctccaatctattttgtaacctttgttctaatggctcagtttgtg
ctggttaacgtggtcgtagctgtgttgatgaaacatctggaggagagcaataaagaagct
aaagaggatgcagaaatggatgctgcgatcaagttggcaattttgaaagaaactcgccgt
ctcagcaccatctcagccagtgccactgcgggaccagaaggcagggcaacttatatcgag
ccacacccagattcacctgagcaggatgaggggatgcaaagaacacaggggaatttgctc
tctccgcggaaaatgtcagtgtcaaggatgcactctttacccaatgacagctacatgttt
cgccctgtgaggccagccagtgctccgtatcctctagaagaagtggagacctgtcaagat
tatcttgaattaggttccatcacctcggttcactcccagccatgcgaaagcctttccctg
ctccaggtccctggtgttcctccccattcccagttcaactgcctccccaagatccctcct
cccatgccctctccaacccacagcatagacaggattttacgcagacagagggcaattaaa
aatgactccattgacatgcataatttcgactccaaagaaaatgtggaaagacagaaaggg
ataaccacaggcagcttcaagctgcatgttcctcaaatcaccggcatctctcaggggtct
cccttgctgccaccacgtggacctagtgtccacaccttccagcagccgcacagccagcac
aatatctcttctcgacctcccagtctggccagcagcagcagaagcaccagccccagtggc
tcaatgtttgactccgctgacccaaccgatgaggaggtgcgccacatcaatagcacagcc
cgcctgtggatcggggttcatgcagaagcaaggagtcactccctctctccttacagcacc
tcagggacgctgcttcccatccccgtgaaaaactgcagcagtgctgccaacttaaccatc
aaagaccccaagaagtgcttcagtgtggacactgagggttttctggaaagaccctacgct
tctgatgaccatcgcaggcactcgattgagatttgctcctcaggagacgatgggctgttt
ggtcaagaactctgtgaaaagaggcacgttcccacgcgtggaaagtctttgcacattccc
cggaagacaaagatgagccctccctgcatctccatcgagcccccatttgaaaaggatgtt
tccccctctcatgcgtccatgaaaaagttgtcggatagcatgttactgcggaggaggaca
ccatcctatgacctggccctgcagcgggactctctggacttgccggagaaccagctgtca
acccagccactcatcaaagtagagcgacatccctctcactgtgccgagtatctgtccctc
ccacaccccgccccaatgagcggtctggcaggcgttttgtgtgaaagcacgcagccgccc
ccctttgatagcagatatgaagaatccacggacttcggctctgtaaacaggacagctcaa
tga
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integrated database retrieval system
