KEGG   Danio rerio (zebrafish): 561025
Entry
561025            CDS       T01004                                 
Symbol
hmgb3a
Name
(RefSeq) high mobility group protein B3a
  KO
K11296  high mobility group protein B3
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    561025 (hmgb3a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    561025 (hmgb3a)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    561025 (hmgb3a)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   561025 (hmgb3a)
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 NOA36
Other DBs
NCBI-GeneID: 561025
NCBI-ProteinID: NP_001116308
ZFIN: ZDB-GENE-050428-1
Ensembl: ENSDARG00000056725
UniProt: F1QGP8
LinkDB
Position
7:25913225..25918281
AA seq 213 aa
MAKGDPRKPKGKMSAYAYFVQTCREEHKKKSPEIPVSFSEFSKRCSGRWKAMTDKEKSRF
EDMAKQDKVRYDQEMMHYMPGKRGKKKDPNAPKRPPSGFFLFCSEHRPQIKAQYPSLGIG
DVAKKLGEMWNGLTDANKQPFLMKANKLKDKYQKDVADYKTKSKAGGVSMGMGMPMANCM
PPKPMMKSNMDDEEDDEEDEEEEEDDDEYDDDE
NT seq 642 nt   +upstreamnt  +downstreamnt
atggcgaaaggggaccccaggaagcccaagggcaagatgtctgcttatgcctatttcgtt
cagacttgccgagaggagcacaagaagaaaagtcctgagattccggtcagcttttcggag
ttctccaaaagatgctccggaaggtggaaggcgatgactgataaagagaaatcccggttt
gaagacatggccaaacaagataaggtgcgttatgatcaggagatgatgcattacatgcca
ggaaagagaggcaaaaagaaggatcccaatgcccccaagagaccaccctctggatttttc
ctgttctgctctgaacatcgtcctcaaatcaaggctcagtatcccagcctgggcatcgga
gatgtggccaaaaaactgggcgagatgtggaatggcctcacagatgctaacaaacaaccc
ttcttgatgaaagccaacaagctgaaggacaagtaccaaaaggatgttgcggactacaag
acgaagagcaaggccggaggtgtttccatgggcatggggatgccaatggctaactgtatg
cctcccaaacccatgatgaagagcaacatggacgatgaagaagatgacgaggaagacgaa
gaagaggaagaggatgatgacgaatatgacgacgacgaatag

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