Danio rerio (zebrafish): 561138
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Entry
561138 CDS
T01004
Symbol
xpo1b
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03008
Ribosome biogenesis in eukaryotes
dre03013
Nucleocytoplasmic transport
dre03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
561138 (xpo1b)
03008 Ribosome biogenesis in eukaryotes
561138 (xpo1b)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
561138 (xpo1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
561138 (xpo1b)
03009 Ribosome biogenesis [BR:
dre03009
]
561138 (xpo1b)
03016 Transfer RNA biogenesis [BR:
dre03016
]
561138 (xpo1b)
03036 Chromosome and associated proteins [BR:
dre03036
]
561138 (xpo1b)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
561138 (xpo1b)
Ribosome biogenesis [BR:
dre03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
561138 (xpo1b)
Pre-60S particles
561138 (xpo1b)
Transfer RNA biogenesis [BR:
dre03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
561138 (xpo1b)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
561138 (xpo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
mTOR_dom
Hydrolase_3
BspA_v
Motif
Other DBs
NCBI-GeneID:
561138
NCBI-ProteinID:
XP_009291328
ZFIN:
ZDB-GENE-070530-6
Ensembl:
ENSDARG00000063229
UniProt:
A0A8M9PPG9
LinkDB
All DBs
Position
17:23966258..23987581
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAIMTMLADHAARQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAANV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVNLFTLTMMQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPQIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKIST
TLNPSNPVNNQVFIQEYVANLLKSAFPHLQDAQVKVFVTGLFSLNQDIAAFKEHLRDFLV
QIKEFAGEDTSDLFLEEREASLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattatgacaatgttagccgaccacgcagccagacagctgctggactttaac
cagaaattggatatcaacctgctggataatgtggtcaactgcctgtaccatggagttggg
ccacagcaaagaatggcccaggaggtgctgactcatttgaaggagcacccagatgcgtgg
acacgagtcgacaccattctagagttctctcaaaacatgaacaccaaatactatgctctg
cagattctggaaacagttattaaaacaagatggaagattctgcccagaaaccagtgcgaa
ggcattaaaaaatatgttgtgggtctcattatcaagacatcatcagatgcagctaatgtt
gagaaagaaaaggtttacattggaaaactcaacatgatattggtacagattctgaagcag
gagtggcctaaacactggcccacatttattagtgatattgtgggtgcaagtcgcaccagt
gagagcttgtgccagaacaacatgatcattctgaagctcctcagtgaggaggtgtttgac
ttctccagtggccagatgacacaagtgaaagccaaacatctgaaggatagcatgtgcaac
gagttctctcagatattccagttgtgccagtttgtgatggaaaattctcagaacgctcca
ctggtacatgctactttagagactcttctgagatttctcaactggattccattaggttat
atctttgaaactaaactcatcagtactcttgtatacaagtttttaaatgttccaatgttt
cgcaacgtgaccctcaagtgcttgactgagatagcaggagtcagcgtcagccagtatgaa
gagcagtttgtcaatctcttcactctgaccatgatgcagctcaaacaaatgcttcccctg
aacactaacatccgactggcgtatgccaacggtaaagatgacgagcaaaacttcattcag
aacctcagcttgttcctctgcacctttctcaaagagcacggacagctgatagaaaagaga
ctaaacctcagagagactcttatggaggctctacattacatgttgctagtgtcagaagtg
gaggagactgagatctttaagatctgtttggagtactggaaccaccttgcagctgaactg
tacagagagagtcctttctcaacgtccacctctccccttctctcagggagccagcacttt
gatgttccgccccgcagacaactctacctgcctgtgctttctaaggtgcgtttgttgatg
gtcagccgcatggccaagccagaggaagtgctggtggtggagaacgatcagggagaggtg
gttcgagaattcatgaaggatacagactccattaatctatacaagaacatgagggagaca
cttgtctaccttacccatctggactatgctgacacagagcgtattatgacagaaaagctt
cataatcaggtgaacggtactgagtggtcctggaagaacctaaacacactgtgctgggcc
attggttccattagtggagccatgcatgaggaagatgagaagcggttcctcgtcacagtc
ataaaggacctactaggtctgtgtgagcagaagagaggcaaggataataaggccatcatt
gcctccaacatcatgtacatagtgggccagtacccacgattcctacgtgcgcactggaaa
ttcctgaaaacagttgtcaacaaattatttgagttcatgcatgaaacccatgatggagtg
caggatatggcatgtgacacgttcattaagatcgctcagaagtgcaggaggcattttgtg
caggtgcaggtgggggaggtgatgcccttcattgatgagatcctcaacaacatcaacacc
atcatctgtgacctgcagccccagcaggtgcacacgttttacgaagctgttgggtatatg
attggagcgcagaccgaccaggctgtgcaggaacacctgatagagaagtacatgttgttg
cctaaccaggtgtgggacagcattattcagcaggccacaaagaacgtggacattctgaag
gacccggagacagtgaagcagttgggcagcatcctgaagaccaatgttagagcgtgtaaa
gcagtgggacacccttttgtcattcaacttggtcgaatatacctggatatgctcaacgta
tacaagtgcctcagtgaaaacatctctgctgccatccagaccaatggtgagatggtaacc
aagcagccactcatcaggagtatgcgcacagtcaagagggagactctaaagctgatctca
ggctgggtcagccgctctaatgacccacaaatggtgggggagaactttgtccctccattg
ctggatgctgtgctcattgattatcagcgcaatgttccggcggcgagagaaccggaagtc
ctcagcaccatggcaacaatcgtaaacaaactgggtggacacatcactggagagatccca
cagatatttgatgcagtgtttgagtgcacattaaacatgatcaacaaagattttgaagag
tacccagagcaccggacgcatttcttctacctgcttcaggcggtgaactctcactgtttc
cctgcattcttggccatacccccagcccagtttaagcttgtgctggactccattatatgg
gcttttaaacacactatgagaaatgtggcagacactggcctgcagatcctctacactctg
ctgcagaatgtggctcaggaggaggcagcggctcagagcttctatcagacatacttctgt
gacatccttcaacacatcttctctgtcgtcacggacacgtcacacacagccggtttaact
atgcacgcatcaatattagcgtacatgtttaacctcgtcgaggaaggaaaaatcagtaca
actctgaacccatcaaacccagtcaacaaccaagtgttcatccaggagtatgtggccaac
ttgcttaaatcagctttcccacacttacaagatgcccaggtaaaagtatttgtgactggc
ctgttcagtttaaaccaagacatcgcagcattcaaggagcacttgagggatttccttgta
cagatcaaggagtttgccggtgaggacacatctgatctgttcctggaggagcgggaggca
tcattgcgtcaggcccaggaggagaaacacaagctgcagatgtccgtgcctggcatcctc
aaccctcatgaaataccagaagagatgtgtgactga
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