Danio rerio (zebrafish): 561460
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Entry
561460 CDS
T01004
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X2
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre02010
ABC transporters
dre04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
561460 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
561460 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dre02000
]
561460 (abca7)
Transporters [BR:
dre02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
561460 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
561460
NCBI-ProteinID:
XP_001920862
ZFIN:
ZDB-GENE-050517-6
UniProt:
A0A8M1QLA5
LinkDB
All DBs
Position
11:5584678..5659694
Genome browser
AA seq
2320 aa
AA seq
DB search
MAIGTQLYLLLWKNFTYRRRNKVQLVVELLWPLFLFLILIAVRQSHPPYKQSQCHFPNKA
LPSAGTLAWIQGIICNVNNPCFHQPTAGETPGLVSNFDNSILSRLLVDMRTVLTISGNRT
TFSGLQDLSKTIQRLGERPDAWPNLPVGEYLRANESFSSYLRTNTSIPSAFVEQLLRARL
NLQVVTLAGEGVRLSDIVCNASLLSRYLTVEEGDSFPELQGALCVVPSDIMQKAEQIFLS
QLDFSKIVTRDRLQANAADFRIISRAVSSASQELASIMDDISSLSSFSELNSEIRLLTPE
NRSVLPRESFRAFSRIMCGHPEAGGERIPSFNWYEDQDIKSFLGRNASEETSLENDNSTT
SFCENLIQNLESNPLSRIVWRGIKPLFIGKLLYTPDTPITRTIMSEVNKTFQDFEILKDV
HEAWQEVGPRIKTFMESSVEIRLLQDLLRRPEVAVIVNMRLENTSWTASRIARFLSTQDP
DTPRKDGAQLTWFDLYQDLNNTFTTLSELTKCFSLNKLEGLTTEGEMVERALELLEDRQF
WAGIVFLLPNSSSSVLPPHVKYKIRMDIDDVTRTNKIKDKFWDPGPAAEPFSDMRYVWGG
FVYVQDLVERAVTRLLTGKEAKTGIYVQQMPYPCFVDDVFIRVLNRSLPLFMTLAWIYSV
AMIIKGVVYEKEARLKETMRIMGLGSGMLWFSWFISSYLPFLFSAALLIAALKWGDILPY
SDPAVVFFFLAAFATATIMLCFLISTFFSRANLAAACGGLIYFTLYLPYVLCVAWREYLT
STHRILASFLSPVAFGFGCEYFSQYEEQGVGIQWFNLKSSPMEGDTYSFNTSIMMLYADA
LIYALATWYIEAVFPGQYGIPRPWYFIFQLNYWGGVPLELGLPIPPAPREEQDARIEAEP
TNLILGVSIRNLVKIYKKGAKLAVNHLNIKFYEGQITSFLGHNGAGKTTTMSILTGLFPP
TAGTIYVKGMDIRSDMDIIRRTLGVCPQHNVLFDILTVEEHVWFYGRMKGMSLEEVNKEM
NSLLEDVGLQHKRFEQTKNLSGGMQRKLSVAIAFIGGSKVVVLDEPTAGVDPYSRRGIWD
LLLKYREGRTIILSTHYMDEADLLGDRIAIISQGKLCCCGTPLFLKARLGTGYYLTLVKR
EMHRTPSNTSSGKIPSAASPKDSDSSVSDDTGLGSEENGFDVAALMALAQQYVPDAQLVE
DIGREAVINLPNAASEDGTLALFLNELDKRQGEFGVVSYGLSDTTLEEIFLRVAEETGVD
ADPEDPPVSQEPQGAPSEDRDAEAQETDPLSGDGQSDSAPLTGCFHTCQQLRALFTKRLK
YAFRSRRGIFAQIVLPAVFVLIALLFSLIVPPFGKYPSLELQPWMYGEQFTFFSNDAPQD
PAMQNLLKALLDPPGFGTKCMQPNGDTECLAKAETKFVRPQIPYSMWQLFHNGNFSIEKP
SPECECSTEKIRRMLPECPEGAGGVPPPQMQQITGDILQNLTGRNISDYLIKTYPQILKK
SLKTKKWVNEFRYGGFSLGAKSSLTMSEPHHLEESVLAIRRRYNIAENGSLDQLLQRLPD
VLSGLTSQNNVKVWFNNKGWHAMASFVNIMNNGLLRANLPPKTERRKYGITAYNHPLNLT
KEQLTEMALMTTSVDVLVSICVIFAMSFVPASFVLFLIEERVSKSKHLQFVSGVKPILYW
TTNYVWDMVNYTVPATMVVFIFISFQQESYVSEKNLPALVLLLLLYGWSITPLMYPASFI
FSVPSTAYVVLTSINLFIGINGSVATFVLELFVDEHLNEVNRILKKVFLIFPHFCLGRGL
IDMAKNQAMADAFQRLGTKQNLDPLSWDFVGKNLFAMAMEGIVFFLFTVLLQYKFFVNFS
RWSGFVLPPLGMEDEDVARERERVKNGRALGDILILSDLSKVYKAGRKPAVNRLCLGIPR
GECFGLLGVNGAGKTSTFRMLTGDTRITYGEAFLSNQSVLTEMEKVHQLMGYCPQFDAII
DLLTGREHLEFYARLRGVPESYVEKVAQWGVQKLGLSQYADREAGGYSGGNKRKLSTAIA
LIGAAPVIFLDEPTTGMDPKAKRFLWNCILSVVKEGRSVVLTSHSMEECEALCTRMAIMV
NGRFQCLGSVQHLKNRFGDGYTIILRLSTPSAEPCPVDAYIQNAFPGIQLKERHQNVLQY
QLPSQTCSLARVFEVLSNNYEELGIADYSVSQTTLDQVFVNFAKDQTDDDQLREITINGG
SVALQPNRPQRPTDLQLSKTSRSSTPRSPSTTSTEPQSTGSKTKKSKSKSPSVSKQQQQM
RMEPVGEAANGSNPTEDQSPGRKDPSVLFIVSNKTQESKV
NT seq
6963 nt
NT seq
+upstream
nt +downstream
nt
atggccattggaacgcagctctacctgctgctgtggaaaaacttcacgtaccgcaggagg
aacaaggtccaacttgttgttgaacttctatggccactcttcctcttcctcatcctcatt
gctgtccgccaatcacacccaccgtacaaacagagccagtgtcattttcctaacaaggcg
cttccttcggctggcacactagcatggattcagggcattatatgcaatgtcaacaacccc
tgttttcatcagcctacagcaggggaaacacccgggctcgtgagcaacttcgacaactcc
atactttctcgacttttagtcgatatgaggaccgtcctgacaatcagtggcaaccgaaca
accttctctggtcttcaggacctgtcaaagacaatccaaagactcggggaaagaccagat
gcctggccaaatcttccagtgggagagtatctcagagccaatgaaagcttctcctcttac
ctgcggacaaacactagcatcccctcagcatttgttgagcagttactgagggcacgactg
aacctccaagtggttaccttagcaggagaaggagtgcgtctgtctgacattgtctgtaat
gcttcactcttgagccgatacctcaccgttgaggaaggagattcttttcctgaactgcag
ggggcgctgtgtgttgtgccctcagatattatgcagaaggcagagcaaatcttcctctca
cagctggacttcagcaagattgttacgagagacaggctgcaggcaaatgcagctgatttc
cggatcatcagtcgggctgtgtcctctgcttctcaggaactggcatcaattatggatgat
atctcttctctgtccagtttctcagagctgaactcagagataaggcttctaacacctgaa
aaccgctcggtactgccacgcgagagctttcgagccttctccagaatcatgtgtggacac
ccagaggcaggaggagagagaatcccttcattcaactggtatgaagatcaggacatcaaa
tcttttctgggcagaaacgcatcagaggagacaagtcttgaaaatgacaacagcaccact
tcattctgtgaaaacttgatccaaaatctggagtcgaaccctctgtcacggattgtatgg
cgtggcatcaaaccactgttcattggaaagctgctgtacacaccagacacgccaatcact
cgcacaatcatgtcagaggtgaacaaaacctttcaggacttcgagattttaaaggatgtt
catgaagcttggcaggaggtcggacccagaatcaaaacgttcatggagagcagtgtagaa
attcggcttctgcaggatcttctgagaaggcctgaggtggctgtaatagtgaacatgcgt
ctggaaaacacctcttggacggcctctcgtattgcccggttcctctcaacgcaggaccca
gatacaccccgtaaggatggagctcagctaacctggttcgatctgtaccaggatttaaac
aacaccttcaccactctctcagagctcacaaagtgcttttctttgaataaattggagggt
ctgaccacagagggtgagatggtagaacgagctctggagttgctggaagatcgtcagttc
tgggctggaatcgtctttctcctcccgaactcttcatcatccgtactgcctccacatgtc
aagtacaagatccgcatggacatagatgatgtcacccgcacaaacaagatcaaagacaaa
ttttgggacccaggcccggctgccgaaccgttcagtgacatgcgctatgtttggggtggt
tttgtttatgtacaggatttagttgagagagccgtgacacgcttgctcactggtaaagag
gccaaaacgggaatatatgtgcagcagatgccttacccctgttttgttgatgatgtattt
atccgtgtgctgaatcgttctctgcctctgtttatgacactggcgtggatctattctgtg
gccatgatcatcaagggtgttgtctatgagaaagaggctcgtctgaaggagaccatgcgc
atcatgggtctgggctcagggatgctgtggttcagctggttcatcagcagttacctgccc
ttcctgtttagtgctgcactccttatcgccgcccttaagtggggagatattttaccctac
agtgacccggctgttgtgttcttcttcctggctgcgtttgctacagccaccatcatgctt
tgcttcctcatcagcacgttcttctcacgcgctaacctggcagcagcgtgcggaggactt
atttacttcacactttacctgccgtatgtgctgtgtgtagcctggagggaatatctgacc
agcacacacaggatcttagcgagcttcctgtctcctgtggcctttggttttggctgtgag
tatttctctcagtatgaagagcagggtgtggggatccagtggtttaacttgaaatccagc
cccatggagggagacacctacagcttcaacacctccatcatgatgctgtatgcagatgct
ctaatctatgcactggccacttggtacattgaagctgtctttccagggcagtatggcatt
cccagaccttggtattttatcttccagctgaattactggggtggggttcccttagagttg
ggattacccattcctccagcacctagagaggaacaagatgcccggattgaagctgagcca
acaaatctcattctgggagtttctataagaaacttagtcaagatttataaaaagggggcc
aagcttgctgttaatcatcttaacataaagttctacgagggccaaataacatcttttctg
ggtcacaatggagctggcaagacaaccacaatgtccattctaacaggattgtttcctcct
accgctggtaccatatacgtgaagggaatggacattcgctcagatatggacatcatccgc
aggactctgggtgtttgtccccagcacaatgtcctctttgacattcttacagtggaggag
catgtgtggttttatggtcgaatgaagggcatgagcttggaggaggtgaacaaagagatg
aattcccttctggaggatgtgggcttgcaacataaacgatttgagcagaccaaaaacctt
tcaggtggcatgcagaggaaactgtcggtagcaattgctttcataggtgggtcgaaggtt
gtggttttggatgagcctacagctggtgtggacccttactcacgccgtgggatttgggac
cttttgcttaaataccgtgaaggccgcaccatcattctgtccacacattacatggatgag
gctgatctcctcggtgatcgcattgcaatcatttcccagggaaaactgtgctgctgtgga
acgccactgttcctcaaagcacgtcttggtacaggatactacctaacgctggtgaagaga
gagatgcataggacacccagcaacaccagcagtggcaaaatcccttcagctgcaagtccc
aaagatagtgattcctctgtgagtgatgacacgggcctgggcagtgaagagaatggattt
gatgttgcagctctaatggctcttgcacagcagtatgttcctgatgctcagctggtggag
gacataggccgggaggctgtcatcaacctgcccaatgctgcatcagaggatggcactctt
gctctgttcttgaatgaactggacaaacggcagggcgagtttggtgtggtcagctacggg
ttgtcagacaccacgctagaggagatctttctgcgtgtggcagaggagactggtgtggat
gcagacccagaagatccgccagtgtctcaagaaccccagggagcgccatctgaggacaga
gatgcggaggctcaggagacagatccgctgagcggggatggtcagagcgacagcgctcct
ctcacaggctgcttccacacatgtcagcagcttcgagcacttttcaccaaaagactgaag
tacgctttccgcagtcgcagagggatttttgcacagattgttttgcctgctgtttttgtt
cttattgctctactgttcagtctcattgttccaccgtttgggaaatatccatcgctggag
ctccagccgtggatgtatggagagcagtttaccttcttcagcaatgatgccccacaggac
ccagccatgcagaacctcctaaaggcccttctggatccacctgggtttgggactaagtgt
atgcagccaaacggagacactgagtgtttagcaaaagctgaaacaaagtttgtccggcct
caaattccatacagtatgtggcagctctttcataatggcaactttagcatagagaaacct
tcccctgaatgtgagtgcagtactgagaaaatccgcaggatgctgcccgaatgtccagag
ggagcaggaggagtccctccgcctcagatgcaacaaatcacaggtgatatcctgcaaaac
ttgacaggccgcaacatttcagactacttaatcaagacatatcctcagattctgaagaaa
agtttaaagacaaaaaaatgggttaatgaatttagatatggaggtttctctcttggggct
aaaagctctctaactatgagtgagccacatcatctggaggagtctgttttggctattagg
agacggtataacattgcagagaatggctctttagatcagctccttcaaagactaccagat
gtgctttcaggactcaccagccaaaacaatgtgaaggtctggtttaataataaaggatgg
catgccatggcgtcgtttgtgaatattatgaacaacggtcttcttcgtgccaacctgcca
cccaagacagaaagacgcaaatatggaataacagcctacaatcaccctctcaacctcaca
aaggagcagctgacagagatggccctgatgaccacctctgtggatgttctggtgtccata
tgtgttatttttgccatgtcctttgttcctgctagttttgtcctgttccttattgaggaa
cgggtcagtaaatcaaaacacctgcagtttgtcagtggagtgaaacccatcctgtactgg
accaccaactacgtatgggacatggtaaactatacagtaccggccactatggtggtcttc
atctttatcagcttccagcaagaatcatatgtatctgagaagaatctgcctgcactggtg
cttctactgttgctgtatggttggtctatcactccgcttatgtacccagcatccttcatc
ttctccgtgcccagtactgcctatgtggtgctcacctccatcaacctcttcattggcatc
aatggcagcgtggccacatttgtcctggagctctttgttgatgagcatttgaacgaggtc
aacaggatcctgaagaaggtctttctgatatttcctcacttctgtctgggtcgaggtctc
atagacatggctaaaaaccaggccatggcagacgcatttcagcggcttggaactaaacag
aatctggatcctttatcctgggattttgttgggaagaacctgtttgccatggcgatggaa
gggattgtgttcttcctctttactgttctcctgcagtataagttctttgttaattttagt
cggtggtcaggctttgttctgcccccgctgggcatggaggacgaagatgtggcgagagag
agggagcgtgtgaagaacggtagagcgcttggagacattctcatcctctcagaccttagc
aaggtatacaaagcaggtagaaagccagcagtgaatcggctttgcttgggcattcctcga
ggagaatgttttgggcttcttggtgttaacggagctgggaaaacctcgaccttccgtatg
ctaacaggagacacccggatcacatatggagaagcgtttcttagcaaccaaagcgttctt
acagaaatggagaaggttcatcagctgatgggctactgtcctcagtttgatgccatcatt
gacctgctgacgggacgagagcacttggagttttatgctcgcctcagaggagtgcccgag
tcttatgttgaaaaggtggcacaatggggagttcagaagctcggtctgagtcagtatgct
gatcgagaggctggtggctacagcggaggaaacaagcgcaaactctccactgccattgct
cttattggagctgcacctgtcatcttcttggatgagccaactactggaatggacccgaag
gcaaagcgtttcctctggaactgcatcctcagtgtagtcaaagaaggacggtctgtcgta
ctcacctctcacagtatggaagagtgtgaggctctgtgtacccgaatggctatcatggtg
aatggcaggttccagtgcctgggctcagttcagcacctgaagaacaggtttggagacggt
tacacaataatccttcgtctgtccaccccatctgcagaaccatgcccagtggacgcctac
atccaaaacgctttccctggcatccagctgaaggagagacatcaaaatgttctccagtac
cagcttccatcacaaacctgctcactcgctcgtgtttttgaggttctgtcaaataattat
gaggagctggggatagctgactactctgtgtcacagacaacactggatcaggtgtttgtc
aactttgctaaagatcagacagatgacgatcagctcagggagatcaccataaacggtggt
tctgtggcacttcagcccaacagacctcagcggcccacagacctccagctaagcaaaacc
agcaggtcgtccacaccacgctctccctcaacgacttcgaccgagcctcagtcaaccggt
tcaaagactaagaagagcaaatcaaaaagtccatcggtctcaaaacagcagcagcagatg
cggatggagcctgttggtgaggcagctaatggatcaaaccccactgaagaccagtctcct
ggaagaaaagacccgtcagttttgtttatcgtcagtaacaaaacgcaggaaagcaaagtg
taa
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