Danio rerio (zebrafish): 561497
Help
Entry
561497 CDS
T01004
Symbol
tmc5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dre02000
]
561497 (tmc5)
03037 Cilium and associated proteins [BR:
dre03037
]
561497 (tmc5)
Transporters [BR:
dre02000
]
Other transporters
Pores ion channels [TC:
1
]
561497 (tmc5)
Cilium and associated proteins [BR:
dre03037
]
Other cilia and associated proteins
Stereociliary proteins
561497 (tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
561497
NCBI-ProteinID:
XP_005163977
ZFIN:
ZDB-GENE-120411-6
Ensembl:
ENSDARG00000013252
UniProt:
E7FDU7
LinkDB
All DBs
Position
3:26734243..26753693
Genome browser
AA seq
685 aa
AA seq
DB search
MRRMSVYPQHGTALENLGLTAHEIQQEVENNTSELVSDLSDLSAGARFQAIRSLPMSYNE
RKAIRNRVNNIKLSKTILPTDCRQQVSLSFRRFRASLTSARQRLVVWQDTLKEIGGRFGT
SVLSYFLFLKWLLKFNVFSFVINFCFITIPQIVHAPNISHVTGFRGLELLTGVGYFNQTV
LFYGGYDGEVIVSKPAYNMQLAYFFTIAAYMVLCGLSLIYSMSRSFQKNFVLETGPVSGG
AWRLLCSWDFSVVNEKAIQYNKNNLGIQLKESLSERLQMKNKISLSDRIKHLSLNLVAWL
LCLLLALGSGAGIYFLGTEQLTFSFNQDPNDLVSEASTLLLPVVVSLINLIVPLLYSLIG
KMETYSNPRAKIYISIARNIILKMSLLGILCFYWLNFVPDKIPCWESFVGQSVYRLLIID
FIFCLLGIFFGEFLRNVIGTMCIQSLGVPEFDIARNVLDLIYAQTLAWIGIYFSPLLPVM
QVLKLFIIFYLKKLSLSMNCQPPKHTGRAAQIQTVFIALLFFPSFVGALSMVAFTVWSLQ
PSDQCGPFQGLKTPFHTIFNWTDSIQGPPETHWVWWIFENVLRSELFYYLISLIVLVITF
FLWQITQGRKQLIKSLREQIVNGGKDKAFLLNKLQNIQRQRREIASYSPQPIRRSMRGSV
RTVAQEFDQTTYYNPNWINTLPMDM
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggatgagtgtctacccacaacatggcacagctctggaaaacctgggacttacg
gcacatgaaatccagcaggaagttgaaaacaatacgtctgaactggtatcagatctgtca
gacctgtcagccggagccagatttcaagcgatacggtcattacctatgtcatataacgag
aggaaagcaatcaggaacagagtgaacaacatcaaactctcgaaaaccatcctccccaca
gactgtcgtcaacaggtgtctctatctttccgcaggtttcgtgccagcttgacatccgcc
aggcagcgtttggttgtatggcaagatactctgaaggagatcgggggcagatttggcact
tctgtcctgtcctacttcttgtttctcaaatggctgctgaagttcaacgtcttctccttc
gtcatcaacttctgcttcatcacaatcccacaaattgtccatgcgcccaatatcagccat
gtcacaggcttcagaggacttgagctgctcactggcgtgggctatttcaaccagacagtc
ttgttctatggcggttatgacggtgaagtgattgtatccaaaccagcctacaacatgcag
ctggcctactttttcaccatagctgcatacatggttctgtgtgggctttctcttatttac
agcatgtccagatcctttcagaagaactttgtgctagaaacaggccccgtttctggagga
gcctggcgtctcctgtgcagctgggatttcagtgtcgtcaatgaaaaagccatacagtac
aacaagaacaacctcggcattcagctcaaggagtccttatcagaaaggctacagatgaaa
aacaaaatctctttgtctgacagaataaagcatctgtcccttaacttagtagcctggctg
ctctgtttattacttgccttaggctccggtgcaggcatctactttctgggtacggaacag
ttgacctttagtttcaaccaagatccaaatgatttagtgtctgaggcgtctactctgctt
ctgcccgtggttgtgtcgcttatcaacctgattgtgcctctcctttactccctcattggc
aaaatggagacttactccaacccacgggctaagatctacatcagcattgcaagaaatatt
attctgaagatgtcccttcttggaattctttgcttttactggctcaattttgttcctgac
aaaatcccatgttgggagtcctttgtaggacagagtgtatatcgacttctgatcattgac
ttcatattctgtctgcttggcattttctttggagaattcctacgcaatgtaatcggaacc
atgtgcatccaaagtctgggcgtcccagagtttgacattgcgaggaatgtacttgatctg
atctatgctcagactctggcttggatcggaatttacttctcccctttacttcctgtaatg
caagtccttaaactgttcatcatcttttacctaaaaaagctcagtctcagtatgaactgt
cagcctcccaaacacactggcagagctgcacagatacagaccgtcttcatcgctctcctc
ttcttcccttcattcgtgggagcgctgtctatggtggctttcaccgtctggagcctgcag
ccctcagatcagtgtgggccctttcagggtctcaaaacccccttccacaccattttcaat
tggactgattcaattcagggccctcctgaaacccactgggtctggtggatatttgaaaac
gtcctaagaagtgaactcttctactatctgattagcctcatcgtactagttatcactttt
tttctctggcaaatcactcagggacggaaacagctcatcaagtctctgcgagagcagatt
gtaaatggaggaaaggacaaagcgtttctcttgaacaaactacaaaatatccaaaggcag
agaagagaaatagcatcttacagtcctcagcctatcaggcgcagtatgcgggggagtgtt
cggacagtagctcaggagtttgaccagacgacatactacaacccgaactggatcaacaca
ctgcccatggatatgtga
DBGET
integrated database retrieval system
