Danio rerio (zebrafish): 562002
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Entry
562002 CDS
T01004
Symbol
spock3
Name
(RefSeq) testican-3 isoform a precursor
KO
K08136
testican
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dre00535
]
562002 (spock3)
Proteoglycans [BR:
dre00535
]
Extracellular matrix (ECM) proteoglycans
Others
562002 (spock3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPARC_Ca_bdg
Thyroglobulin_1
Kazal_2
Kazal_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
562002
NCBI-ProteinID:
NP_001314916
ZFIN:
ZDB-GENE-090311-24
Ensembl:
ENSDARG00000070266
UniProt:
A0A0R4IMY5
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All DBs
Position
1:22147638..22218801
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AA seq
387 aa
AA seq
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MLVLVGVCALLIAGASARNDNGNFLDDKWLTGRWDKFRDEVEEPGTWSPGKPFDQALDPA
KDPCLKIKCGRHKVCVAEDYQTPTCVSQRRMSFKDMNLNSPLLKCKRCPVVHPSPICGTD
GHTYSTKCKLEYQACISGKQISVKCPGQCPCAPGNPAEKRECGNAEMTEVVSRLREWITV
LHESGNTNKKYKFQKPEKKVDMSKVPLCKDSLGWMFSRLDTNFDLHLDQSELSSLNSEKS
DVCTKAFLRSCDPNRDRLVSSQEWCSCFQRYQEAPCQSEITIIHKQQAGKKLLGPYVPSC
DEDGFYRPQQCHGSSGQCWCVDRYGNELAGSHTHGPAECVVESSGDFGSGDSLLSDDEDG
DVVNDEEEMGDDDDEYDQADDEYSYLS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgctggtcggtgtgtgcgcgctgctgatcgccggagcttctgcccgcaacgac
aacggcaattttttggacgacaaatggttgaccgggagatgggacaaattcagagatgag
gtggaggaaccaggaacatggagcccaggaaagccattcgatcaagctctggaccctgcc
aaagatccatgtctgaagataaaatgtggccgtcataaagtgtgtgtagctgaagattac
caaacacccacctgtgtcagtcagcgcaggatgagttttaaggacatgaacttgaactca
ccactgctgaaatgcaaaagatgcccagttgtgcacccttcacctatttgtggaacagat
ggacacacttattccaccaagtgtaaactggaatatcaagcttgtatctctggaaagcag
atttctgtgaagtgtccaggacagtgtccctgtgctccaggaaatccagcagagaagaga
gagtgcggtaatgcagaaatgactgaagtggtgagcagattacgagaatggatcacagtt
cttcatgagagcggcaatactaacaagaaatacaagttccagaagccagagaagaaggtg
gacatgagtaaagtgccgctctgcaaggactctttgggctggatgttttccagactagac
acaaactttgaccttcatctcgaccaatctgagttgtccagcctgaactcagagaagagt
gatgtgtgcactaaagccttcctcaggtcatgtgacccaaacagagacaggctcgtctcc
agccaggagtggtgctcttgctttcagagatatcaagaggctccctgtcaatcagagatc
accatcatccacaaacagcaggctggcaagaagctactgggtccgtacgtcccctcctgt
gatgaggatggtttctatcggcctcagcagtgtcatggcagcagtggtcagtgctggtgt
gtagaccgctatggaaatgagcttgcggggtctcatactcatggacctgctgaatgtgtg
gtggagtcttctggagattttggcagcggtgactctcttctctcggatgacgaggacggc
gatgttgtaaatgatgaagaggaaatgggagacgacgatgatgaatatgaccaagctgat
gatgagtacagctacctgtcataa
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