Danio rerio (zebrafish): 562071
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Entry
562071 CDS
T01004
Symbol
nfx1
Name
(RefSeq) transcriptional repressor NF-X1
KO
K12236
transcriptional repressor NF-X1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
562071 (nfx1)
04121 Ubiquitin system [BR:
dre04121
]
562071 (nfx1)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
562071 (nfx1)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
562071 (nfx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
PAM2
Motif
Other DBs
NCBI-GeneID:
562071
NCBI-ProteinID:
XP_690559
ZFIN:
ZDB-GENE-160728-101
Ensembl:
ENSDARG00000105669
UniProt:
A0A1D5NSC5
LinkDB
All DBs
Position
7:complement(41840141..41861521)
Genome browser
AA seq
1083 aa
AA seq
DB search
MAEASVTDTSKLNPESAEFVPKAKLNQPDSRRSYRQSNHYQDWRANHVRPHHHLRQSNAA
NHGGNEFENPTDNALPSPEPAFRGGLRGRGRGGRPRGGRGNGDTDRRLQSQRWIKPVSDR
GHDRPNTPTSNRSTDEENKERATFEVDVREPYRDNRWKKPNKARAERLMKEPMSRDQEEN
LENQAAGKDTKPVAVYEHPEPEQRNHKGWRGGEHRMQPNFRRKGPGPSHGIEGNWREREP
VQMKEDERRGAEEEGERPEEANRNRRGMRGKQPPLQNPGPKRGGGPERRTGPVKRIEPPK
SKETQTGCLIEQLTEEKYECMVCCEVIRVMAPVWSCQSCFHVFHLNCIKKWARSPASQAD
GDSSEGWRCPACQHVALKAPNSYTCFCGKVSNPEFQRTEIPHSCGDMCGKKRSGGECNHP
CNILCHPGPCPQCPAFITKSCVCGKMSKQVRCSQTGPLLCEEVCGTLLNCSQHSCAQVCH
SGPCQPCQLRVQQVCFCGVVFREVACGTDSKKFDGSGYFSCCKPCGKMLDCQSHRCQQSC
HPGECQPCPLSPKLVRSCSCGQTPLSKLLDLGYPERKACTDPIPSCGKTCNKPLPCGDAD
SVHLCEKLCHEDSCGPCSLTSSIKCRCGSNTKEVPCAAIQTEEDMVFTCEKRCTKKRLCG
RHKCGELCCVDMEHKCSMICGYKLSCGLHRCQDLCHRGNCQPCWQTSFDELTCYCGETVL
FPPIPCGTRPPECKNVCTRDHDCDHPVFHSCHNEEKCPPCTYLTKKWCMGNHEQRSNIPC
HLQDISCGLVCEKLLPCGSHRCKRICHRGECQAEGECKQPCTHPRPGCGHPCGAPCHPGT
PCIPTVCSAKVALQCDCGRKKETVPCADAASSYQRYAAISVASKLSDMQLGESVDIGQLT
KKEQKKARLECDQECATLERNRRLAEALQIDPSVDPFKSTSSKYTDSLKEDARKDFKFVS
EIEEEIRNLVELANKGKQPKRSHCFPPMKRDHRRIIHELAEVYGVESVSYDNEPKRNVVI
TAIRGKSACPNTSLAALISRESFTRAPPPIAHIKQHNSKTDNGNSWMKTSKDEPSIDYFD
VQD
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcctcagttacagacacatcaaagttgaatccagagtctgcagagtttgtt
ccaaaggctaaactcaatcagcccgactctagaagaagttacagacagtcaaaccactat
caggactggagggcgaatcatgttaggcctcaccatcaccttagacaatccaatgcagct
aatcatggcggcaatgagttcgaaaaccctactgataatgcattaccctctcctgaacca
gccttcagaggaggcttaagaggcagaggcagaggaggaagaccaagaggaggacgaggt
aatggtgacactgaccgtcgacttcagagccagagatggataaaaccagtcagtgatcgt
ggtcatgatcgacctaatacacccacttctaatagatcaacagatgaggagaataaagaa
agagcaacctttgaagtcgatgtaagagagccttatcgagacaaccgatggaagaaaccc
aataaagcaagagctgagaggttgatgaaggagcctatgtccagagaccaggaggaaaac
ctagaaaaccaggctgcaggaaaagacacaaagcctgtagctgtttatgaacaccccgag
cctgagcagaggaaccataagggatggaggggtggcgaacaccgtatgcagcccaatttc
cggaggaaaggaccaggccctagccatggaattgagggtaactggagagagagggaacct
gttcagatgaaagaggacgagaggagaggggctgaagaggagggtgagagacccgaggag
gccaacaggaatagaaggggaatgaggggaaaacagccaccacttcagaatccaggtcct
aagagaggtggaggtcctgagcgaagaacaggaccggtgaaacgcatagaacctcccaaa
agcaaagaaacacagacaggttgtctaattgagcagctgacagaggaaaagtatgagtgt
atggtctgttgtgaagtgattcgggtcatggctccggtttggagctgccagagctgtttc
catgtattccaccttaactgcatcaagaaatgggcccgctcccctgcatctcaagctgat
ggtgatagcagtgaaggttggcgttgtcctgcatgccagcacgtggcactgaaagctcca
aattcatatacctgcttctgtgggaaggtgagcaatcctgagttccagcgcactgagatc
cctcatagctgtggcgatatgtgtggtaaaaagagaagtggaggagaatgcaatcacccc
tgtaacatcttgtgccatcctggaccctgcccacaatgcccggcttttatcaccaagtcc
tgtgtttgtggaaaaatgagtaagcaggtgcgttgtagtcagacaggacctctgctttgt
gaggaagtttgtgggactcttctgaactgctcgcagcactcctgtgcacaggtgtgccac
tcaggaccatgccaaccctgccaacttcgtgtccagcaagtctgcttctgcggtgtggtg
ttcagagaggtggcatgtggcactgattctaagaagtttgatggatcaggatatttctcc
tgttgcaagccttgtggaaaaatgctagattgccagtcccatcgctgtcagcagtcttgc
caccctggagagtgtcagccatgccctctcagccccaagctggtgcgcagttgttcatgt
ggacagactcccctctctaagcttctagatcttggctaccctgagagaaaggcctgcact
gacccgatcccttcatgtggaaagacctgtaacaagccactgccatgtggagatgcagat
tctgtccacttgtgtgaaaagctctgccatgaggacagctgtggaccctgctcactgacc
tcctctattaaatgcagatgtggcagcaacaccaaggaagttccttgtgcagccattcag
actgaagaggacatggtgtttacctgtgagaaacgctgcaccaagaagcgcttatgcggc
aggcacaagtgtggagagttgtgttgtgtggatatggagcacaagtgctcaatgatttgt
ggttacaagctcagctgtggactacatcgatgtcaggacctttgccaccgtggtaactgc
cagccttgttggcaaacaagtttcgatgagttgacctgctactgtggggagactgtgctc
ttcccgcccattccttgtggcaccagacctcctgaatgtaaaaacgtatgtacccgggat
catgattgtgatcacccagtgtttcattcatgccataatgaggagaaatgccctccctgt
acttacctcaccaaaaagtggtgcatgggtaatcatgagcaaaggagtaacatcccatgc
cacctgcaggacatctcgtgtggtttagtgtgtgaaaagctcttaccctgtggttctcat
cgctgtaagaggatctgtcaccgtggggaatgtcaggcagagggagaatgcaaacagcct
tgcacccatcctagacctggctgtgggcacccctgtggtgctccctgccacccgggcacc
ccctgcatacccactgtctgcagtgccaaggtggcactgcagtgtgactgtggccgcaaa
aaagaaactgttccctgtgccgatgcagccagttcctaccaaagatatgctgctatttcc
gtggccagtaagctgtcagatatgcagctcggggaatctgttgacattggacagctcaca
aagaaagagcagaaaaaggccagattggagtgcgatcaagagtgtgctaccctggagagg
aacaggcggcttgctgaggccctgcagatagatccctcagtggatcccttcaagtcaaca
tcttccaaatataccgactctctcaaagaggatgcaaggaaagattttaagtttgtcagt
gaaatcgaggaagagattaggaatttggttgaactggctaacaagggtaaacaacctaaa
aggagtcactgtttcccaccgatgaagcgtgaccacaggagaattatccatgagctggcc
gaggtgtacggcgtggaaagcgtcagctatgataatgaacccaagcgcaatgtggtaatc
actgccatcagggggaaatctgcgtgtcccaacactagtctggctgctttgatttcaagg
gaaagctttaccagagcccctcctcccattgcccacatcaaacaacacaacagcaagact
gacaatggcaactcatggatgaaaacctctaaagatgagccctcaattgattattttgat
gtgcaggattga
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