Danio rerio (zebrafish): 562120
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Entry
562120 CDS
T01004
Symbol
trpc2b
Name
(RefSeq) transient receptor potential cation channel subfamily C member 2b
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
562120 (trpc2b)
Ion channels [BR:
dre04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
562120 (trpc2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
RNase_H2-Ydr279
Motif
Other DBs
NCBI-GeneID:
562120
NCBI-ProteinID:
NP_001025337
ZFIN:
ZDB-GENE-050712-3
Ensembl:
ENSDARG00000003344
UniProt:
Q4VDB0
LinkDB
All DBs
Position
21:33404091..33422018
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AA seq
1140 aa
AA seq
DB search
MESLTPDQWREIVNKKFRFPPELLGAIREGNLNLVSSLLKTGDGIIRQLDDSEDRQWREA
LNLSIRLGNEDTMASLLQGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSMAIFDHSIDDSQFAPGVTPLTLACQKDLYDIVTMLNQKGHEIPWPHKISCACLECT
NGRQYDLLKFSLSRINTYRGIASRAYLSITAEDAMLSAFRLSRDLRKLSKKEPEFKPQYL
SLEQVCQEFAVELLGMCRNQSEVTTILNSCGDRDEDSEDELDHQTFEEGIPNLARLRLAV
NYNQKQFVAHPICQQVLSSIWCGNLSGWRGSRTSWKLLVSFGIFLTMPFLCLIYWIAPKS
KLGKILKIPVIKFLLHSASYMWFLITLLGESIAMEVYRESFATRQHTILHNSFHMVWVVG
FFWFECKEVWIEGLRSYFLDWWNCLDVMVLSMYLASFALRLVIMLKVHFLCQLQDNQDEC
VYFTETMRDQWHQEDPQFISEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMM
RFMFILVIIGTAFLCGINNIYVPYIISPNLGKLNETFSFLFWTMFGMADQTYVDMPAFAL
AELVGRILYGIYTLIIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLT
MPVPFNIIPSPKAVFYLLRGIVKRICCCCFNCNSAPDYPPLTSMKDEGGSGENRIPYRQQ
VIRALVQRYIESARREFEETKRKDVGNRITELSKVIGHLHTEMKQIHSNLFNYSGNTKAD
PSGDSSFLGKYILGAKNNFKDFNNERRAPPLQETVRHLEPAETNEEPEEERKEEQNAEEQ
IDNTLQTGNDDANKIVIEIESSPDAESGNAADKMEKAKEGTDLNGDVEESNGDVVEIISE
GFKFNFGQTNLVSFLSKRIEEKLEKTVKDNEEELDGGETDVSGDVEESNEASEDAEVVSE
ENKFELNQTSMVSFLAKRFEEKLGGNFKENMEELNAGGADVEESNRASENANEDAEVVIY
GIKFDLNQTSMVNFLTKRIEEKLEENFTENMEELNAGGADVEESNGASENANEDAEVVIY
GIKFDLNQTSMVNFLTKRIEEKLDRTFSFTEKQASSPTGSNISQDTGFGSQEFNPSAGSP
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcctcacgccggatcaatggcgcgagattgtgaacaagaagttccgcttccct
ccggagcttcttggcgccatccgagagggcaacttgaacatggtgtcgtccctgctgaaa
accggtgacggcatcatccgccagctggacgactccgaggaccggcaatggagagaagcg
ctcaacctgtccatccgactgggcaacgaggacaccatggcctccctcctccaaggggtc
aagtttgacttccggcagattcatgaagctctcttggtggccgtggacaccaaccagcct
cgcgtggtcaaacgtctcctggaccggctggatcaagagaagggaaacaagatggacgtg
cgctctttctctatggccatcttcgaccactccatcgatgattcccagtttgcccctgga
gtgacgccgttgaccctggcctgtcagaaggatctgtatgacatcgttactatgctcaat
cagaagggtcacgaaatcccttggccacataaaatatcatgcgcctgtctggagtgcacg
aatggaaggcagtacgatctgctcaagttctcgttgtctcgtatcaacacttaccgaggt
attgccagccgtgcttacctgtccatcacagcagaagatgccatgcttagtgcctttcgg
ctcagccgggatctccgcaagctgtctaagaaggagccggagtttaagcctcagtatctc
agccttgagcaggtatgccaggagttcgccgtggagctgctgggaatgtgccggaaccag
agcgaggttaccaccatcctgaacagctgtggagatcgagatgaggacagtgaagatgag
ctggaccaccagacctttgaggagggcattccaaatctggcccgcttgagactcgctgtc
aactacaaccagaaacaatttgtagcccaccccatctgccagcaggtgctctcctccatc
tggtgtggaaacctctcaggctggaggggcagcagaacgtcctggaagctcctggtgtct
tttgggatctttctgactatgcctttcctctgcctcatctattggattgcacccaagtca
aagttgggaaagattttaaagatccctgtgattaagttcctgctccattcagcttcatat
atgtggtttctgatcactctactgggggagtccattgccatggaggtttatcgggaaagc
tttgccacacgtcagcacaccatcctgcacaactctttccacatggtctgggtggttggt
tttttctggttcgagtgtaaggaggtttggatcgagggcttgaggagctacttcttggac
tggtggaactgtctggacgtgatggttctcagtatgtatctggcttcattcgccctgaga
ttggtcatcatgctcaaggtccacttcctctgccagttacaagacaatcaggacgagtgt
gtctacttcaccgaaaccatgcgtgaccagtggcatcaggaggatccgcagttcatctct
gaggtgctgtttgccgtcaccagcatgctgagcttcactcgattggcatacatccttcca
gcacacgagtctcttggtacgctgcagatctccattggaaagatgatcgatgacatgatg
aggttcatgttcattttggtgatcatcggtactgcgtttctctgtggcatcaacaatatc
tatgtcccgtatattatctctccaaatctcggaaaattaaatgagaccttcagcttcctc
ttctggaccatgtttgggatggccgaccagacgtatgtagacatgccggcgtttgctttg
gctgagcttgttggcaggatcctgtatggcatctacacgctgatcattgtcattgtgctt
ctgaacatgctcattgccatgatcaccaactcttttcagaaaattgaggacgatgctgat
gttgagtggaaatttgcacgttccaagctttacctgagttacttcagagaaggactgact
atgcccgtgcccttcaacatcatcccgtctccaaaggctgttttctatcttttgagagga
atcgtcaagcggatctgctgctgctgcttcaactgtaactcagctccagattatcctccg
ctaacatcaatgaaggatgaaggaggctcaggagaaaaccgcattccctacagacagcag
gtgatccgcgctctggtgcagcgctacatcgaatctgccaggagagagtttgaagaaaca
aaacgcaaagatgttgggaaccggatcacggagctcagcaaagtgatcggccatctacac
acagaaatgaagcaaatccactcaaacctgttcaactactcgggcaacaccaaagccgat
ccatcaggagattcttctttcttgggcaagtacatccttggagccaaaaacaacttcaag
gactttaacaatgagagacgagctcctccgttacaggagactgtgcgccatttagagcca
gcagaaaccaacaaagaaccagaggaggaacggaaagaagagcagaacgctgaggaaaaa
atagacaacactcttcagacaggaaatgatgatgccaataaaatagtcatagaaatagag
tccagtcctgatgctgagagtggaaacgcagcagatgagatggaggaaaccaaagaagga
actgatctaaatggagatgtggaggaaagtaacggggatgtggttgaaatcataagtgag
ggcttcaagtttaattttggacagacgaacttggtgagcttcttatctaagaggattgaa
gaaaagctggagaagacggtcaaagataatgaggaggaattagatggaggagaaacggat
gtaagcggagatgttgaggaaagtaatgaagcgagtgaagatgctgaagtcgtcagcgag
gaaaacaaatttgagctgaatcagacgagcatggtgagcttcttagcaaagaggttcgaa
gaaaagctgggggggaatttcaaagaaaatatggaggaattaaacacgggaggaactaat
aacgaaaacaacggagcgagtgaagatgtaaacgaggacgctgaagtcgtcatttatgga
atcaagtttgacctgaatcagacaagcatggtgaatttccttactaagaggattgaagaa
aagctggaggagaatttcacagaaaatatggaggaattaaatgcaggaggagctgatgtt
gaggaaagcaacggagcgagtgaaaatgcgaacgaggacgccgaagtcgtcatttatgga
atcaagtttgacctgaatcagacaagcatggtgaatttccttactaagaggattgaagaa
aagctggacaggactttcagtttcactgagaaacaggcgtcatctccgaccggcagcaat
atttctcaagacacaggtttcggttctcaagaattcaacccttcagctggaagcccttaa
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integrated database retrieval system
