Danio rerio (zebrafish): 562379
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Entry
562379 CDS
T01004
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X7
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
562379 (lrba)
Membrane trafficking [BR:
dre04131
]
Endosome - Lysosome transport
Others
Others
562379 (lrba)
Endosome - Golgi transport
562379 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
562379 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Neurobeachin
Laminin_G_3
Beta-prop_WDR75_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
SUKH_6
Motif
Other DBs
NCBI-GeneID:
562379
NCBI-ProteinID:
XP_002660488
ZFIN:
ZDB-GENE-090311-19
Ensembl:
ENSDARG00000031108
UniProt:
A0A8M1RJV8
LinkDB
All DBs
Position
1:complement(23920688..24350418)
Genome browser
AA seq
2861 aa
AA seq
DB search
MASAGDSAVQIPIRGIRMKFAVLAGLLEAGEVSNRDTVETIFNLLVGGQFDLEMNFIIQE
TESIICMVELLDKCDSTCQAEVWSMFTAVLKKSLRNLQACTDIGLIQLVLQRIDRAETMI
ADLMVDMLGVLASYSITVKELKLYFSKLKGEQGQWPPHAVKLLSVLKSMAQRNGPDSFFS
FPGKSAAAIALPPIAKWPYQNGFTFHTWLRLDPINNINVDKDKPYLYCFRTNKGLGYSAH
FVGGCLIVTSLKSKAKGFQHCVKYDFKPQKWYMVTIVHIYNRWKNSEISCYVNGELASYG
EITWFVNTSDTFDKCFLGSSETADANRVFCGQMGAVYLFSEALSAAQILAIYQLGPGYKG
TFKHKAESDLLFAEHHKMLLYDGKLSACIAFTYNPRATDAQLCLESSPKDNASIFVHSPH
ALMLQDVKAVVTHSVQSAIHSIGGVQVLFPLFAQLDFLQHSGDELDTSVCCTLLSFVMEL
LKGSVAMQEQVLACKGFLVIGYSLEKSSKVHVTRPVLDIVLAFARYLSNLPTGVMLLKQL
CDHILFNPTIWIHAPAKVQLVLYTYLATEFISTVTIYNAIRRVGTVLQVMHTLKYFYWVV
NPLDRSGITPKGLDGPRPNQKEIHSLRAFLLLFVKQLIMKDHGIKEDELQSILNYLLTMH
EDDNLMDVLQLLVALMSEHPGSMVQAFDQRNGIRVIFKLLASTSEGIRVQALKVLGYFLK
YLSPKRKSEVMLAHGLFSLLTERLMLHSNQFTVTTYNVLFEILTEQICTQVIHKQHPDPD
STVKIQNPQILKVIAALLKNAPPEAESMEVRRIFLSDMIKLFNNSRENRRSLLQCSVWQE
WMLSLCFINPKNSEEQKITEMVYAIFRILLYHAIKYEWGGWRVWVDTLSITHSKVTFEQH
KENLARMFLEYQRMGSEGGSESRIRTISGVSQDSQFLASANGELHTEEKAPSTVIELRVE
EQDNDQTADNEEMQTQIPVTVSNILVRDEEERQTDTVATSLEMQDRDKDEQYAVKEPKKD
NEIKHMDDNHKTGDEDREQMENVKTEGRVEEESSNLSIKDDTDSPQTETDKNAKDATEAV
KMSDEGKTSNAENEQNVQVEDEKKDLGDSTLEAVKEDSTQKSSEVLVHEETSTTGASVVN
EDSTDVSSASNFVKVSDDSTEDSSFVSATTGETDDHGVEREDGGKEKENKSETDKDEKLM
ENEKTVGIQDSPAPMVEVDLNQSSSPEETKPQTEGHGDVEAEQTTTEQKSKAEVSSSAES
ISQDAANNQDSPKVAGTDNTANKTKEIKIARLDVSSVASDTERLELKDTSATNPSANQAA
PTSPTGQSNEGSSSARSTMFRIPEFKWSHMHQRLLTDLLFSIETDVQMWRSHSTKTVMDF
VNSSENVVFVHNTVHLISQVVDNLIMACGGILPLLSAATSSSHELENIEPSQGLAVEASL
MFLQRLINLVDVLIFASSLNFTEIEAEKNMSSGGILRQCLRLVCAMAVRNCLECQQHTLS
KSGAESSRGQQSLLGAAKSIPAQSPVDIVTGGMSPIRDLDRLLQDMDINRLRAVVFRDIE
DSKQAQFLALAVVYFISVLMVSKYRDILEPHNDRRNTQRSQSVRSTESVQSDLENGLSPL
HRDSGIEDEKASDIQSNVKAQTGPDAVSEALSTLSDEVRRGQEDRDSKGKNVNVKDILRS
LVSAPSDDIMVDPSLIPPGFLGAVSEASRDQSIQFHSFDRSVVVAPKKAGGAPSPGMSTV
SASASVPSATAASSGGTPVNSVSVVSAGETVQSTESTPGGTSTSSNLPSVPALSPMTQTS
TPNMSISERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSV
VELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSHTMKDHLVRVANEAEFILSRQRAED
IQKHAEFESHCAQYSAEKRDEEKMCDHLIRAAKYRDHVTSTQLIQKIVNILTDKHGAWGS
SAFSRPREFWRLDYWEDDLRRRRRFIRNPFGSTHSEATLKAAAEHAPEEDVLKGKQSIRS
SVLGNQNSESELLLEDDDTLSSLEEKELENLTGPVNLSTSAQLVAPAVVVKGTLSITALE
LYFEVDEEDPSFKNIDPKILAYTEGLHGKWLFTEIRAVFSRRYLLQNTALEVFMANRTAV
MFNFPDAATVKKVVHCLPRVGVGTNVGLPQTRRISLASPKQLYKASNMTQRWQRREISNF
EYLMFLNTISGRTFNDLNQYPVFPWVITNYDSEELDLTLPSNYRDLSKPIGALNPKRAAF
FSERFESWEDEQVPKFHYGTHYSTSSFTQMWLLRIEPFTTFFLNFQGGKFDHADRTFSSV
SRAWRNCQRDTSDVKELIPEFYYLPEMFVNSNNYNLGVMDDGTVVSDVELPPWAKSPEEF
VRINRLALESEFVSCQLHQWIDLIFGYKQQGPEAIRALNVFYYLTYEGAVNLSSISDPML
REAVESQIRSFGQTPCQLLIEPHPPRSSAMQVTPLMFTEQMQQDVIMVLKFPSNSPVTHV
AANTQSGLTNAAVITVTANRLFAVNKWHGLTGHQTSSVQDQQYQLPVEIDPLIASNVGAH
RRQISDLLDQSIQVNAQCFVITADNRFILLCGFWDKSFRVYSTDTGKLTQIVFGHLDVVT
CLARSESYIGGDCYVLSGSRDATLLLWYWNGKHSSIGESAGTEFVTPRAILTGHDCEVTC
ASVCAELGLVISGCREGPCLVHSMNGDLLRTLEGPDGCMRPRLVLSSTEGHCVIYYDKGH
FCVFSINGKLLGHMEVEDNIKAMLLSKDGQYLLCGGDAGVLNVWQIHDLKQLFTYPGCDA
GIRSMAIAHDQRCIITGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8586 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcgggtgacagcgccgtccagatccccattagaggaatccgcatgaaattc
gccgtgctggccggactcctggaggctggtgaagtctccaatcgggacaccgtggagacg
atcttcaatctgctggttgggggtcagtttgacctggagatgaacttcatcattcaggag
acggagagcatcatctgtatggtggaactgctggataaatgtgactccacttgccaggca
gaagtgtggagtatgttcacggccgtactgaagaagagcttacgaaaccttcaggcctgc
actgatattggcctcatccagctggtgctacagcgcatagaccgagctgagaccatgata
gcagatctgatggtggacatgcttggagttttggccagctacagcatcacagtgaaggaa
ctgaagctgtatttcagtaagctgaagggagaacaaggccaatggccacctcacgctgtc
aagctgctgtctgtgttgaagtccatggctcaaagaaatggcccagattcctttttcagc
ttcccagggaagagtgctgcggccattgctcttcctcctattgcaaagtggccataccag
aatggcttcaccttccacacctggctgcgtctggaccccatcaataacataaacgttgac
aaggacaagccttatctctactgcttccgcaccaacaaaggtttgggctactctgcacac
tttgtgggtggatgtctgatagtgacctctctaaaatccaaagccaaaggcttccagcac
tgtgtgaaatatgacttcaaaccccagaagtggtatatggtgaccatagtgcacatttat
aatcgttggaagaacagtgaaatcagctgctatgtcaacggagagctggcgtcatatggc
gaaatcacctggttcgtcaacacaagtgatacgttcgacaagtgttttctgggttcatca
gagacagcagatgctaaccgtgtgttctgcggtcagatgggggcagtgtatctgttcagt
gaagctctcagcgctgctcagatattagccatctatcagctggggccaggatacaagggc
acttttaagcacaaggccgaaagtgacctgctgtttgcagaacatcataagatgctgctg
tatgatggaaagttgtctgcctgcatcgccttcacctataatcctcgggccactgacgct
cagctgtgtctggagtcctcccccaaagacaacgcctccatctttgtgcactcgccacat
gctctcatgctgcaggatgtgaaggctgtggtgacacattcggttcagagtgccattcac
tctataggaggagtccaggtccttttccctctgtttgcacagctggatttcctccaacac
agcggtgacgagctggacacctccgtctgttgcacactactgtcgtttgtgatggagctg
ttgaagggctctgtagctatgcaagaacaggtgctggcctgcaagggctttctggtcatc
ggttactctctggagaagtcttccaaagtacatgtgacacgacctgtgctggacatcgtc
cttgccttcgcccgttaccttagcaaccttcctactggtgttatgctcttgaaacagctg
tgtgaccacatcctcttcaaccctaccatctggattcatgcccctgcgaaggtacagctg
gttctctacacctacctggccacagagttcatcagcactgtcaccatttacaatgccatc
cgcagagttgggaccgtactgcaggtcatgcacacgctcaagtatttctactgggttgta
aacccactggaccgcagcggaatcacacccaagggtctcgatggaccgagacccaatcag
aaagagattcactctctccgagcgtttctgctcctgtttgtcaagcagctcataatgaag
gatcatggcataaaagaagatgaactgcagagtattctgaactacctgctcacaatgcac
gaggatgataatctgatggatgttctccagcttctggttgcactgatgtctgagcatcct
ggctcaatggttcaagctttcgatcagcggaatggaatacgggtcatctttaagctgctg
gcgtccacaagtgaagggattcgtgtgcaggctctcaaagtcttgggctactttctcaag
tatttgtcaccaaagagaaagtcagaggtgatgctggctcacggcctgttctctctgctc
actgaacgactgatgctccactcaaaccagttcacagtgacaacatacaacgtgctcttc
gagattcttacagagcagatctgtactcaggtcattcacaaacaacacccggaccctgac
tcaacggtgaagattcaaaacccacagatcctgaaagtcatagcggccctgttaaagaat
gctcctcctgaggcagaaagcatggaagtgcggcgtatcttcctctcagacatgattaaa
ctctttaacaacagccgagagaaccgcaggagtctgttgcagtgctctgtatggcaggag
tggatgctctctctgtgctttataaaccccaagaacagcgaggagcagaagatcactgag
atggtgtacgccatctttcgcattcttctttatcatgccattaagtacgagtggggcggc
tggcgcgtgtgggtggacacactctccatcacacactccaaggtcacctttgagcaacac
aaggagaatctggcccgaatgtttcttgagtaccagcgaatgggatctgagggaggatct
gaaagcaggatccgaacgatctctggagtcagccaagattctcagttccttgcctcggcc
aacggggaactgcatacagaagagaaggctccatctactgttattgagctacgtgtagag
gagcaggacaacgatcagactgcagacaatgaggagatgcagacccagatccctgtcaca
gtgtccaacattctggtcagagatgaggaagagaggcagacagacactgttgccacctca
ctggagatgcaggacagggataaggatgaacagtacgctgtaaaagaaccaaaaaaagat
aatgaaataaaacatatggatgacaatcataaaacaggggatgaagaccgtgaacaaatg
gaaaatgttaagactgaaggtagagttgaagaggagagcagtaatctgagtataaaagac
gataccgacagcccacagactgaaactgacaagaatgccaaagatgcaactgaagctgtg
aagatgtcagatgaaggtaaaacaagtaatgcggaaaatgagcaaaacgttcaggtagaa
gatgaaaagaaagatcttggagattctactcttgaagctgttaaggaagattccactcaa
aagtcttctgaggttttagtccatgaggaaaccagcacgactggggcctctgttgtgaat
gaagatagcactgatgtttcctcggccagcaacttcgtgaaagtcagtgatgacagcaca
gaggactcttcatttgtgtctgctacaactggggagacagatgaccatggtgttgaaagg
gaagacggtggaaaggagaaggagaacaagtctgaaactgataaagatgaaaagcttatg
gaaaatgagaagactgtgggaatccaggattcaccagcccccatggtggaagtggattta
aaccaaagctcctctcctgaggagaccaagcctcagacggagggtcatggagatgttgag
gcagagcaaacaacaacagaacagaagtctaaagcagaggttagctctagtgctgagagt
atctcacaggatgcagcaaataaccaagactctccgaaggtggcagggactgacaataca
gcaaataaaaccaaagagattaaaatagctaggctggatgtgtcaagtgtggcctcagac
acagaaagactggaactgaaggacacctcagcgacaaacccgagtgcaaatcaagctgct
cccacaagccctacaggtcaaagcaatgaaggttcatcttcggctcgatctactatgttc
cgtatccctgagttcaagtggtctcatatgcatcagcgtcttctgactgacctgctgttc
tccatcgagacagacgtgcagatgtggagaagtcattcaactaagacagtcatggacttt
gtgaacagcagtgagaatgtggtgttcgtgcacaacactgtccatctcatctctcaggtg
gtggacaacctcatcatggcctgtggaggaattcttcctctgctttctgcagctacttct
tcttcgcatgagctggagaacatcgagccgtctcagggtttggctgtggaggcatcactg
atgttcttgcagagactgatcaatcttgtggatgtgctgattttcgccagttcactcaat
ttcactgaaatcgaagcagagaagaacatgtcttcagggggaatcttaagacaatgtctt
cgcctggtgtgtgcgatggctgtgagaaactgtctggaatgtcagcagcacactctgagt
aagtctggtgcagagagcagccgcggacaacaaagccttctgggagccgccaagtctata
ccagcacagagtcctgtggacattgtgactggagggatgtctcctataagagatttagac
cggcttctgcaggacatggacatcaatcgtctgcgtgctgtagtgttcagagacatagag
gacagtaaacaagctcaatttctggcactggcagtggtctacttcatctctgtcctcatg
gtgtccaaatatagggacattctggagccacacaatgacagaagaaacacacagcgctca
cagtcagtcaggagcacagagagtgttcagtctgatctggagaatggtttgtctcctctt
caccgggactctgggattgaggatgagaaggcctcagacatccagagtaatgtaaaagcg
cagactggccctgatgctgtatccgaagctctgtctactttgtccgatgaggtcaggaga
ggtcaagaggacagagacagcaaaggaaagaatgtcaatgtcaaggatattctgagaagt
ctcgttagcgcaccctctgatgacatcatggtggaccccagtcttataccgcctgggttt
ctgggtgctgtgagcgaagcctcccgtgaccagtccatccagttccactcgtttgatagg
agtgttgttgtggcacccaagaaggccggtggggctccgtctccaggaatgagcacagtg
tctgcatctgcatccgtcccgtcagctactgctgcatcctcaggtggaactccagttaac
agcgtgtcagtggtgtctgcaggagagaccgttcagagcacagagtccacgccaggagga
acctccaccagctccaacctgccatctgtccctgcattatccccaatgacccagacctcc
acccccaacatgagtatctctgagaggttggaacatgcactggagaaagcagctccttta
ctcagagagatttttgtggattttgcaccgttcctctctcgcacacttctgggcagtcat
gggcaggagctactcatcgaaggcaccagtcttgtgtgtatgaagtccagcagttctgtg
gttgaactggtcatgctgctctgctctcaggagtggcagaactccatccagaagaacgca
ggtttggccttcattgagctggtgaacgagggcaggctgctgagccacaccatgaaggac
catctggtgcgtgtagctaatgaggccgagttcattctgagccgccagagagcagaggac
atccaaaagcatgccgagtttgagtctcattgtgctcaatattcagctgagaaacgcgat
gaggagaagatgtgtgatcacctgatcagggccgccaagtaccgggatcatgtgacgtcc
acgcagctcatccagaagattgtaaacatcctcacagacaaacatggtgcatggggcagc
tcggctttcagcagaccgcgggagttctggcgcctggactactgggaggatgacctgagg
agacgtcggcgcttcatcaggaacccgtttgggtccacacactctgaggccacgctcaag
gctgcagctgagcatgctccagaggaggacgtgctgaagggcaaacagtccatcaggagt
tcagtgctggggaatcagaactcggagagtgagctgctcttggaggacgatgacaccctc
tcatccttggaggaaaaagagttggaaaatcttacagggcctgttaacctgagcaccagc
gcacagctggttgcgcctgctgtagtggtaaaaggtacactgtccatcacggccctggag
ttatactttgaggtggatgaagaagacccaagttttaagaacattgatcccaagatattg
gcctacacagagggtctgcatggaaaatggctgttcaccgagatcagagcagttttctca
cgccgctatttgctacagaacacagcgctggaggtcttcatggccaacaggacggcggtc
atgttcaacttcccagatgctgccacagtgaaaaaggtggtgcactgtttgcccagagta
ggagtcggcaccaacgtcggccttcctcagaccagacggatttctctggccagcccgaaa
cagctctacaaggcctccaacatgacacagcgctggcaaagacgagaaatctcaaatttt
gaatacctcatgttccttaacaccatctctggccgtacatttaacgatctgaaccagtat
cctgtgttcccctgggtaatcaccaactacgacagcgaagagctcgacctcaccctgccc
agcaactacagagatctgtccaagcctattggtgcgctgaacccaaagagagccgctttc
ttctctgagcgcttcgaatcatgggaggatgaacaggtgcccaaattccactatggcaca
cactattccacctccagcttcactcagatgtggctactgaggattgagcccttcacaaca
ttcttcctgaatttccaaggtggaaaatttgaccacgccgatcgcactttttcctcagtg
tctagagcctggagaaactgccagagggacacgtctgacgtgaaggagttgatccctgag
ttctattacctccccgagatgtttgtcaactccaataattacaacctgggagtgatggat
gatgggacggtggtgtcagatgtggagctgccgccgtgggccaagagtcctgaggagttt
gtacgcataaaccgactggctctggagagtgagtttgtgtcctgtcagttgcatcagtgg
attgatctgatctttggatacaagcagcagggacccgaggccatcagagctctcaatgtc
ttctactacctgacttatgaaggagctgttaacctcagctccatatctgaccccatgctc
agagaggctgtggagtctcaaatcagaagttttggacagacaccctgtcagctgctaatt
gagcctcacccgcctcgcagttctgccatgcaggtgaccccactgatgttcacagagcag
atgcagcaggacgtcatcatggtactcaagttcccgtccaactcgcccgtcacccatgtg
gcagccaacacgcagtcaggcctaaccaacgcagcggtcatcacagtcactgccaaccgc
ctctttgcagtcaacaagtggcacggcctcactggtcatcaaacctcttctgttcaggac
cagcagtaccagttaccggttgagatcgaccctttgatagccagtaatgtgggtgctcac
aggaggcagatctcagatctgttagatcagagcatccaagtaaacgctcagtgttttgtc
atcacagctgacaaccgcttcatcctgctgtgtggcttctgggacaagagcttccgcgtg
tactccactgatacaggtaaactgacacagattgtttttgggcatcttgatgtggtgacc
tgcctggcgcgctcagagtcgtatattggcggagactgctacgttctctctggctccaga
gacgccacactactgctctggtactggaacggcaagcacagcagcattggagagagcgct
ggaacagagtttgtgacgccccgggcgatcttgacgggtcatgattgtgaggtgacgtgt
gcgagtgtgtgtgcagagctgggactggtcatcagtggctgcagagagggtccctgtttg
gtccactcaatgaacggtgacctgttgaggactctggagggtccagacggctgtatgcgg
ccacgacttgttctgtcctccactgagggtcactgtgtcatttactacgacaagggccac
ttctgtgtgttcagcatcaatggaaagctattgggacatatggaggtggaagacaacata
aaggcgatgctgctgagtaaagatggccagtatctgctgtgtggaggagatgcaggagtt
ctcaatgtctggcagattcacgacctcaaacagctcttcacttacccaggctgtgatgct
ggaatacgctctatggctattgcacatgaccaaagatgcatcatcactggcatggcgtca
gggagcatcgttctgttctacaacgacttcaacagatggcatcatgaataccagacccga
tactga
DBGET
integrated database retrieval system
