Danio rerio (zebrafish): 562434
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Entry
562434 CDS
T01004
Symbol
ptbp2b
Name
(RefSeq) polypyrimidine tract-binding protein 2b
KO
K14948
polypyrimidine tract-binding protein 2
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
562434 (ptbp2b)
Spliceosome [BR:
dre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
562434 (ptbp2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_occluded
RRM_8
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
562434
NCBI-ProteinID:
NP_001093477
ZFIN:
ZDB-GENE-060810-49
Ensembl:
ENSDARG00000015901
UniProt:
A5PM68
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All DBs
Position
2:19777146..19795599
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AA seq
538 aa
AA seq
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MDGIASDVAVGVKRSSDDLLSGSLYSSPNSSVTANGSDSKKLRVEDSMDSPPSRVIHIRK
LPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVP
VFIQYSNHKELKTDSALNQRAQAVLQAVSAVQEGGSPSSDMASKSVLTPAPSPVLRIIID
NMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNS
CCTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPPVDPSMAAALSKDSPSLLGTPS
GMVTSYSSGGGFPSSLGAISPLSAAAAAAAAAGRVALSGHSVPGGVLLVSNLNDEMVTPQ
SLFTLFGVYGDVQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMYGKIIRVTLSKHQ
TVQLPREGLDDQGLTKDFTSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPDNVTEEDLRL
LFSNSGGTVKAFKFFQDRKMSLLQMATAEEAIQALIDLHNYDMGRGHRLRVSFSKSTI
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgcaagtgatgttgcagttggtgtgaagagaagctcagatgacttgctg
tctggcagtctgtacagtagtccaaattcttcagtcactgctaatggaagtgacagtaaa
aaactgagggtggaggacagcatggacagcccaccatcaagagttattcatatccgtaaa
ctccccaatgaggtttctgagactgaggtcatcgccctgggattgccctttggaaaggtc
acaaatatactaatgcttaaaggcaaaaatcaggcatttttagagctgggaaccgaggaa
gcagctgttaccatggtgaactactacacagctgttacacctcaagtgcgtaatgtccca
gtgttcattcagtactccaaccacaaagagctcaagacagacagtgcactcaaccagcga
gctcaggccgtgctgcaggcggtgtcagctgtccaggagggcggctctccaagctcggac
atggccagcaagagtgtgttaacgcctgcccccagcccagtactgcgaataatcatcgac
aacatgttctacccagtcaccctggacgtcctccaacagatcttctccaagtttgggacg
gtcatgaagataatcacgtttaccaaaaataatcagtttcaggctcttctgcagttcagt
gacccagtaaatgcccagcaggccaaactgtccttggacggccagaacatttacaactct
tgttgcactctgcgcattgacttctccaagctggtcaacctgaatgtaaaatacaacaat
gacaaaagccgggattatacccgacccgagctgccagcgggagatggccaaccaccagtg
gacccgtctatggccgccgctctcagcaaagattccccctccctgcttggtactccctct
ggaatggtaacttcctactctagtggtggagggtttccatcttctctaggggccatcagc
cctctgagcgcagcagcggcggcagcagcagcagcagggagggtagcgttgtccggtcat
tcagtacctggcggagtgctactggtcagcaatctcaatgatgagatggttacgccccaa
agtctgtttaccctcttcggtgtctacggtgacgtgcaacgcgtgaaaatcctttacaat
aagaaggacagtgctttaatccagatgtctgatggaaaccaggcccagttggccatgagc
catctgaacgggcagaagatgtatggcaagatcattcgtgtgaccctttcgaagcaccag
acggtacagctacccagggaaggtttagatgatcagggcctgacaaaggacttcactagt
tctccactgcaccgcttcaaaaagcctggctctaaaaacttccagaacatcttcccccct
tcagctacacttcatctctctaacatacctgacaatgtgacagaggaggatttacgactg
ctcttctcaaactccggcggtacagtgaaagcgttcaagtttttccaagatcgcaaaatg
tctctgctgcagatggccacggccgaggaggcaattcaggccctcatcgaccttcacaac
tatgacatgggccgcggccaccgtctgagagtgtccttctcaaagtccaccatctga
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