Danio rerio (zebrafish): 562601
Help
Entry
562601 CDS
T01004
Symbol
nphp3
Name
(RefSeq) nephrocystin-3
KO
K19360
nephrocystin-3
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dre03037
]
562601 (nphp3)
Cilium and associated proteins [BR:
dre03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
562601 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
TPR_10
NPHP3
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
TPR_14
NPHP3_N
TPR_11
TPR_6
TPR_19
AAA_16
NACHT
AAA_22
AAA_14
AAA_33
KAP_NTPase
14-3-3
ATPase_2
Uso1_p115_C
DUF2225
AAA_19
Viral_helicase1
AAA
DUF4635
XRCC4_CC
Pox_H7
Motif
Other DBs
NCBI-GeneID:
562601
NCBI-ProteinID:
NP_001189370
ZFIN:
ZDB-GENE-091204-117
Ensembl:
ENSDARG00000078261
UniProt:
P0CI65
LinkDB
All DBs
Position
24:9612377..9667220
Genome browser
AA seq
1303 aa
AA seq
DB search
MGTASSLVSPGEVIEDAYGGEGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTGSV
ELEYAAEYERLRKDYEIFRVSKNNEITSMQKKEAKLDEENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLESKLQQLQAQ
GIQIYDPADSDSDDNHTTVTTAGTQCEYWSGGVLGSEPSMGSMMQLQQTHRGPEFAHSLI
DVEGPFANVSRDDWDAAVASLLQVSPHVSQSLWSNTVRCYLIYTHETKAELQTFIQTYSL
RLRRFCEGLGHFYLNVSFPEEKAAVFAAERRREMERSSVCVLLLKSSVSSCVVEDVEEAF
VKTPDARPLLLYLRTADRKGEKEEVSTLSPATRDLLERVNKADRSAKLKVVDHAGSVEEG
AALIFSQLERIIKQELLGLELEENGVVEEREEEDSGDVLWDLHDEQEQIEAFQQACGAAA
RFSFQKYVDRLNDMVAAPPPTPPLLVSGAPGSGKSLLLAKWIELQQKHSPNTLILYHFTG
RPLSTSTDPVLIIKRLTVKLLQHFWSISGLSMDPSKILEEFPRWLERLSARHHGNIIIII
DSIDQIQNAERHMKWLIDPLPANVRVLVSVNVETCPQAWRLWPTLHLDPLNPREVKSVIS
TECVSVDIKLSKDQEKKLEKHCRSAATCNALYVSLLARLITHFSTSWTLDRTLQQCVMCQ
DTVSLYRLGLKVALDSLNSDQEKHIMKELLCLVCASHNGISESEVLELFPDLTFPALISM
LHNLERLLIITYACGLIRFQHSQACEGVNQEFLDGDKCRGSYREKCIRFFSQQLEQDRVT
WRVADELPWLLQQQEDRSKLQMSLLNLFVSQNLYKRGHFSELLAYWQFVGKDKCSMATEY
FDALKEFEKTCESEQSMSRLANLYETLGRFLKDLGLLSQAVAPLQRSLEIRETALDPDHP
SVAQSLHQLAGVYVHWRKFGNAEQLYKQAMEICENAYGPEHSTVARELDSLSLLYQKQNK
YEQAEKLRKRSVKIRQKTARQKGHMYGFALLKRRALQLEELTLGKDSTDCAKTLNELGVL
YYLQNNLDAAKLFLTRSLEMRQRVLGPDHPDCAQSLNNLAALHSERKEYESAEELYERAL
DIRKRALAPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELALEIREKSFGPKHPSVATAL
VNLAVLYCQLKQHSDALPLYERALKVYEDSLGRLHPRVGETLKNLAVLSYEEGDFEKAAE
LYKRAMEIKEAEPSLVCGKAPSRHSSSGDTFSMRSPALPNASR
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgggtacggcatcctctctggtgagccctggtgaggtgattgaagatgcgtatggtggc
gaaggaggagaagcatgcgagataccagtggaggtgaagccaaaggcacgcctgctgcgg
agctccttccgtcgtgggcctcgtgtcatcggtgccagcttcaaatccaccggatctgtg
gaactggagtacgcagcggagtatgagcgcctcaggaaagactacgagatcttcagagtc
agcaagaacaatgaaatcacctccatgcaaaagaaagaagctaagctggatgaggaaaac
aagaggttgcgggctgagctgcaggctcttcagaagacttaccagaagattcttcgagaa
aaggaaagtgccttggaagcaaaataccaagccatggaaagagctgccacttttgaacat
gacagagacaaggttaaacgacagtttaagatatttcgtgaaactaaagaaaaagaaatt
caggatttgctgcgggcaaaacgagatctggagtcaaaacttcaacagctgcaggcgcaa
ggcattcagatttatgacccagcagactcagattctgatgacaaccacaccactgttact
actgcaggaactcaatgtgaatactggagtggtggtgtgttgggcagcgagccgtcaatg
ggcagtatgatgcagttacagcagacacacaggggtccggaattcgctcacagtcttatt
gacgtggaggggccgtttgctaatgtcagcagagatgattgggatgcggcggtggccagt
cttctgcaggtttctcctcacgtctctcagtctctgtggagtaacactgtccgctgctac
ctcatatacacacacgagaccaaagcagagctgcagactttcattcagacttattcttta
aggcttcggaggttttgtgaaggtttgggtcatttttacctgaacgtgtcatttcctgag
gagaaggctgctgtgtttgctgctgaacgcagacgagagatggagaggagctctgtgtgt
gtgctgcttctcaagtcctcagtgtccagctgtgttgtggaggatgttgaggaagcgttt
gtgaagaccccggatgctcgacctctcttgctgtatttgcgaactgccgacagaaaaggt
gaaaaggaagaggtgtctactctcagcccagccaccagagacctgctagagagagtgaac
aaggctgacagaagtgccaaacttaaggtagtggatcacgctgggtctgtggaggaagga
gctgctcttatcttctctcagctggaaagaatcataaaacaagagttgttgggattggag
ttagaggagaatggagtggtggaggaaagagaagaggaagactctggtgatgtgctttgg
gatcttcatgatgagcaggagcagatagaggcatttcagcaagcttgcggcgctgctgcc
agattcagctttcaaaagtatgttgacagactcaatgacatggtagctgcccctccaccc
actcctccgctgctggtatctggtgcacctggatcaggcaaatcccttttgctggctaaa
tggatagagttacagcagaaacactctcccaacaccctcatcctttatcattttacggga
cgtcctctctctaccagcacagatcctgtgcttatcattaaacgcctcacagtaaagctc
ctccagcatttctggtctatttccggcctttcaatggacccttcgaagatcctcgaagag
ttcccacgctggctagagcgactgtctgcacgtcaccatggaaacatcataatcatcatt
gattccattgaccaaatacagaatgctgagcgccacatgaaatggttgattgatccgctt
cctgctaatgtgcgagtgctggtgtcggttaatgtggagacctgcccacaagcatggaga
ttgtggcccacactgcacctagatccactcaatcccagagaggtaaagagtgtcatcagc
acggagtgtgtgagcgtggatatcaaactcagtaaagatcaggagaagaagctggagaaa
cactgtcgttcagcagcaacatgcaacgcactctatgtctcactactggccagactcatt
acacacttcagtacctcttggacattggacagaactctacaacagtgtgtaatgtgtcaa
gatacagtatcactctacagacttgggctgaaggtagcactggactcactaaacagtgat
caggaaaaacacatcatgaaagagttattgtgcctagtttgtgccagccacaacggcatc
agcgaatcagaagtcttggagctgttcccagacctgactttccctgctctcatctcaatg
ctacacaatctggagaggcttctcattattacttatgcctgtgggcttatacggtttcag
cactcacaggcatgtgaaggggtcaaccaagagtttctggatggtgacaaatgccgtgga
tcctacagagagaaatgtattcgcttcttcagccagcagttggagcaagaccgagttacc
tggagagtggctgatgagttaccatggttactgcagcagcaggaagaccgaagtaaactt
cagatgagtctgcttaacctgtttgtgtcccaaaacctctacaagaggggtcatttttca
gagcttcttgcatactggcagtttgtgggtaaggataagtgttcgatggcgacggagtat
ttcgacgcattgaaagagtttgagaagacctgtgagagtgagcagagcatgagccggctg
gccaacctatacgaaacactgggacgattccttaaagatctgggattgctcagtcaggct
gtggcccccttgcagcgctccttggagatccgtgagactgctctggaccccgaccaccca
agtgtggctcagtccctgcaccagctggcgggggtgtacgttcattggaggaaatttgga
aacgcagagcagttgtacaaacaagctatggagatttgtgaaaacgcttatggccctgaa
cacagcaccgtcgcaagagaactagactcgctttcactgctctaccagaaacaaaacaaa
tatgagcaggctgaaaagttgagaaagagatccgtcaagatcagacagaaaacagcacga
cagaaaggccacatgtatggtttcgcacttctgaagcgacgggcactgcagttagaggaa
ctgacacttggcaaagactcaacagattgtgccaagactctaaatgagctcggcgtgctg
tattacctgcagaacaacctagatgctgctaagttgttcttgaccagatctctggagatg
cgtcaacgtgtgctgggaccggaccatcccgactgcgcccagtccctgaacaacctggct
gcgctccacagcgagaggaaagaatacgagagtgccgaggagctctacgaaagagcatta
gacatccggaaacgagcgctggccccagaccacccctctctcgcttataccctcaaacac
ttagccatgctttacaaacgcagggggaagctggaaaaggcggttcctttatatgaacta
gctcttgagatcagagagaagagctttgggcccaagcaccccagtgtggccactgctttg
gttaaccttgcagtgctctactgccagctgaagcagcacagtgatgcattgcctttgtat
gaacgcgctctcaaggtttatgaggacagtcttggtcgactgcatcctcgtgttggagag
actctaaaaaacctggctgtgctcagttacgaagagggtgatttcgagaaggctgctgaa
ctctacaagcgagcaatggaaattaaagaggccgagccatctctggtgtgcggtaaggct
ccttcccgtcactcatctagtggtgacacctttagcatgcggagccccgccctgccaaat
gcatcaaggtga
DBGET
integrated database retrieval system
