Danio rerio (zebrafish): 562676
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Entry
562676 CDS
T01004
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X2
KO
K10357
myosin V
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
562676 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
562676 (myo5c)
04131 Membrane trafficking [BR:
dre04131
]
562676 (myo5c)
03029 Mitochondrial biogenesis [BR:
dre03029
]
562676 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dre04812
]
562676 (myo5c)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
562676 (myo5c)
mRNA cycle factors
P-body specific factors
562676 (myo5c)
Membrane trafficking [BR:
dre04131
]
Others
Actin-binding proteins
Myosins
562676 (myo5c)
Mitochondrial biogenesis [BR:
dre03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
562676 (myo5c)
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
562676 (myo5c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
ATG16
CCDC89
Csm1_N
Motif
Other DBs
NCBI-GeneID:
562676
NCBI-ProteinID:
XP_073798785
ZFIN:
ZDB-GENE-131127-196
Ensembl:
ENSDARG00000104235
UniProt:
A0AC58IX29
LinkDB
All DBs
Position
25:5443096..5494142
Genome browser
AA seq
1169 aa
AA seq
DB search
MRASQFALLAGFFKEEEADSGHKIIKVTPAQPRVKASNKQLRSTVGDKFRSSLYLLMETL
NATTPHYVRCIKPNEEKLPFEYDSRRVVQQLRACGVLETIRISAQSYPSRWTYVEFYSRY
SILMSQSELKLGEKKQTCRTVLQRLIPDSNQYKFGRTKIFFRAGQVAYLEKLRLDHLRAA
CVTIQKHVRGWRQRRSFLNIRQAALIIQLYVRGKKQIRCTVTAQALKQGWAAIVIQRHCR
GFLVRRIYQLVLRAAVTIQAFTRGWMARKRYKKMVAEHKALVLQKYARAWLVRRRFQTMR
RLVINVQLSYRVQQLRKKVEEQNKENCGLMEKLTSLSNARAQGLEKIQALEAELGKLTNE
MSALVQRAKTNSEEANQAIDVLQNDKEKLVEENKALERKLKDTTVQMQDQFEDVKRKLME
DLEREERLRKVAEHNSELQKEDSDKEIVAIKEENRRLREERIRLQTQVEEDVKTNTELQE
QMLQLTKHVKVIPDLRKEINNLQIQRAEAEKTLRAQNLQARAKMNLITRQLLGDATEQDL
IQRLNEEASDNNDDGADLITAFDGMERAAKVMETQLREQKDAHESQLEALIFKNEHLSKE
NEQLQALFQEKSDINQSIGQEVTRLTAENMVIPELKQQVSELNRHKHELESQLQDQTAEM
SAKLKELSSALHLAVEEEQSQRRRLQEELTESQRRREETDRQISELQEENQQLKKAQITE
SQAKNTLRLETSRLTAENMDFEEQLDMKDRLIKRLQDQIKALQTHAAANQKAAPAVPKEY
LGMLEYKKEDEGRLIRILILELKPRGVGVNMIPGLAAHLLFMCVRHADYLNDGNKLKCLM
NNIITAVKEVITEHQENFELLSFWLSNTYHFLNCLKQYSGEEEFMKHNTPRQNKNCLKNF
DLSEHRQILSDLAINIYHQFISVMEDALFPMIIPGMLEHESLQGISSMKPTGLRKRSSSV
FEDGGDSSTSEAFSVSSILQKLSTFNSSMCQQGMEPQLQGQIVRQLFYLIGSSSVNCILL
RKDLCSCRKGMQIRCNISYLEEWLREKDLLSSNAMETLGPLSQIAWLLQVNKTTDEDAAE
IKQRCSELSAVQIVKILNSYTPIDDFEKRVAPSFVRKVQALLQEREGSSQLMMDSQYRFQ
VTFPFCSSTQALELLQIPSSLHLDFLTRI
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgctagtcagtttgctctcttggcaggattttttaaagaggaggaagcagattct
ggccataaaatcatcaaagtgactccggcacaacctagagtcaaagcgtcaaacaagcag
ctcagaagcactgtaggagacaagtttcgaagctccttgtacctgttgatggagacgctg
aacgccacgacacctcattatgtgcgctgcattaaacccaatgaggaaaaactgccattc
gagtatgactccaggcgtgtggttcagcagctgagggcctgcggtgtgttggaaaccatc
cgtatcagcgctcaaagttacccatccaggtggacgtacgttgagttttacagccgttac
agtatcctgatgagccagtcggagctgaagctgggagagaagaagcagacgtgcaggacg
gttcttcagagactcattcctgactccaatcagtacaagtttggtcggaccaagatcttc
ttccgggccgggcaggtggcgtatctggagaagctgcgtttagatcatctgcgagcggct
tgtgtgaccatccagaagcacgtgaggggctggagacaaagacgcagctttctgaacatc
agacaggcggctctcatcatacagctgtacgtgcgcgggaagaagcagatcagatgcaca
gtgacagctcaggcgttgaagcagggctgggctgcaatagtgatccaaagacactgccgc
ggttttctggtacggaggatttaccagctcgtcctgagagctgcggtcaccatacaggcc
ttcaccagaggatggatggctcgcaaacgctacaaaaagatggtggcagaacataaggct
ctggttctgcagaaatatgctcgagcgtggctggtgcgccggcggtttcaaaccatgcgg
cggctggtcattaatgttcagctatcatacagagtccagcagctgcgtaagaaagtagag
gagcagaataaagagaactgtggcctgatggagaaactcaccagcttgtctaacgcacgg
gctcaagggttagaaaagattcaggctctggaggcggagctgggaaaactgaccaatgag
atgtcagctttagtgcagagggcgaaaacaaactcagaggaggccaatcaggcaatcgat
gtgcttcagaatgacaaagagaagcttgttgaggaaaataaggctttggagcggaaactc
aaagatacgactgtgcagatgcaagatcaatttgaggatgtgaagcggaagctgatggaa
gatttagaaagagaggaaagactaagaaaggtggcagagcacaacagtgaactgcagaag
gaagactcggacaaagaaattgtggcgataaaagaggaaaaccgtagactgagagaggag
cgaatcagactgcaaacgcaagtggaggaggacgtgaagaccaacacagaactgcaagag
caaatgctgcagctcaccaaacacgtcaaggtcataccagatttacgtaaagaaatcaac
aacctgcagattcaacgagctgaagctgaaaaaaccctgagagctcaaaatctacaagcc
agagctaagatgaatctgatcacgaggcagctgcttggtgatgctacagagcaagatctc
atccagaggctcaatgaagaagcctctgataataacgatgatggagctgatctaatcact
gcttttgatggcatggagcgagctgctaaggtgatggaaactcaactgcgagagcagaaa
gacgctcacgagagtcaactggaagctctgatcttcaaaaatgagcatttaagcaaagag
aacgagcagcttcaagctttgtttcaggagaagagcgacattaaccaaagcattggacag
gaagtgactcgactcaccgctgagaacatggtgattcctgaactgaagcagcaggtgtca
gagctgaaccgccacaaacacgagctggagagccagttacaggaccagactgctgagatg
agcgcgaaactgaaggagttatcgagtgcgctccatctggctgttgaagaggagcagtct
cagcgcagacgcctgcaggaggagctgacagagagccagaggaggagagaggagacggac
agacagatctctgagctccaggaggagaaccagcagctaaagaaagctcagatcacagag
agccaagccaaaaacacactccgactggagacttcacgcctcaccgctgagaatatggac
ttcgaggagcagctagacatgaaggacagattaataaagcgacttcaagaccaaatcaaa
gctcttcaaacacacgctgcagccaatcagaaagcagctccagccgtacccaaagagtac
ctgggcatgctggagtacaagaaggaggatgaaggcaggctgatccggatactcatcctg
gagctgaagcctcgcggtgtgggtgtgaatatgatccctggtttggctgctcatctgctc
ttcatgtgtgtgagacacgcagattatctgaatgacggaaacaaactcaagtgcctcatg
aacaacattataacagccgtcaaagaggtcatcacggagcaccaggagaattttgaactt
ctgtccttctggctctcaaacacgtatcacttcctgaactgcctcaaacagtacagcggg
gaagaggagttcatgaagcacaacactccccggcagaacaaaaactgcctgaagaacttt
gacctttcggagcaccgtcagatactcagcgacctcgccatcaacatctaccatcagttc
atcagcgtcatggaggatgcgctgtttcctatgatcatcccagggatgctggagcatgaa
agtctccagggaatctccagcatgaagcccaccggtctccgcaagcgctccagcagtgtg
tttgaggatggcggagactccagcacgtctgaggccttcagcgtcagctccatcctgcag
aagctcagcacctttaactccagcatgtgtcagcagggcatggagccgcagctgcagggg
cagatcgtcagacagctcttctacctcattggctcctcatccgtcaactgcatcctgctc
cgcaaggacctgtgctcctgccgcaagggcatgcagatcaggtgtaacattagttatctg
gaggaatggctgcgagagaaggatttgctgagcagcaacgctatggagactttggggccg
ctgtctcagatagcctggcttcttcaagtcaacaagaccacagatgaagacgcagccgag
atcaagcagagatgctccgagctctcagccgtacagatcgtgaaaatcctgaactcctac
acgcccattgatgattttgaaaagcgagtcgccccgtcatttgtacggaaggtgcaggcg
ctgctgcaggagcgcgagggctcgtcacagctgatgatggactcgcagtatcgtttccag
gtcacgtttcccttctgctcctcaacacaggctctggagcttttacagattcccagcagc
cttcatctggacttcctcacccgcatctga
DBGET
integrated database retrieval system
