Danio rerio (zebrafish): 562772
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Entry
562772 CDS
T01004
Symbol
slco1c1
Name
(RefSeq) solute carrier organic anion transporter family member 1C1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
562772 (slco1c1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dre02000
]
562772 (slco1c1)
Transporters [BR:
dre02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
562772 (slco1c1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Sugar_tr
Kazal_1
Motif
Other DBs
NCBI-GeneID:
562772
NCBI-ProteinID:
NP_001038462
ZFIN:
ZDB-GENE-041210-50
Ensembl:
ENSDARG00000016749
UniProt:
Q5RIX3
LinkDB
All DBs
Position
4:complement(2674761..2744957)
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AA seq
689 aa
AA seq
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MPRNCMKESSSPKENEIFLWRMDLPNKERRSPENSPSSSRRCCSSFKMFLVALSFAYFSK
ALSGSYMKSTITQLERRFDIPSYLIGVIDGSFEIGNLLVIAFVSYFGAKLHRPKIIAIGC
LLMSLGTFLIALPHFIIGRYKFETSIRLSVNSSSSLSPCSLSSAEPSTSSVPSTGCEHES
RLSMWIYVFLGNILRGIGETPVQPLGISYIDDHALEENAAFYIGCVQTISVIGPVFGYLL
GSVCAKIYVDIGFVNMESISITPGDARWVGAWWLGYLIAGFITLLSAVPFWFLPKSLPLP
ERRLSKYSPERNSFIKDSALLEHKYQADEPANFLEMAKDFLPTLRSLLGNPVYFLYLCVT
IIQFNSLIGMVTYKPKYIEQHYGQSASKANFLMGVINIPAVALGMFSGGVIMKKFKLSIM
GAAKFALGTSLLGYFLSLFFFSMGCENASVAGITMSYNGTESLFMADGSLRASCNAACHC
PEKNWDPVCGEDGLTYVSPCLAGCRTSHGSGMDTVFEQCSCIGVGNQTATAGQCNNRESC
HRIFPYFLALSVITSFIISLGGTPGYMLLIRCIKPQLKSLALGFHTLTTRTLAGIPAPIY
FGAIIDTTCLKWGHKKCGGRGACRIYNTAAYSVSGPDVGFAHRFLLPVYPGVVGFATARS
EAGAQHNGERRISGSRRTAGAQKRRKQQL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaactgcatgaaagagtcatcatctcccaaggaaaacgagatctttctgtgg
aggatggatctgcccaacaaggaaagacggtcaccggaaaacagcccaagctccagtcgg
cgctgttgctcaagcttcaagatgttcctcgtggccttgtccttcgcctatttctccaag
gctttatccgggagctatatgaaaagcacaataactcagctggaaagacgcttcgacatc
cccagttacttaataggtgtcattgacggcagctttgaaataggcaacttgttagtgatc
gcctttgtgagttactttggtgccaaacttcaccgtccgaaaatcatcgccatcggctgc
ctgttgatgtcactcgggacgtttctcatcgctttgccccatttcataatcggccgatat
aagtttgagacgtcgatccgcttgtctgtaaactccagcagcagcctctctccgtgttca
ctgagctctgctgaacccagcacatcttcagtgcccagcacaggctgtgaacacgagtct
cggttgtcgatgtggatttatgtgtttctggggaatatcctgcgtgggattggagagact
ccagtgcagccgctgggaatctcctacatcgatgatcacgctctggaggagaacgcagct
ttctacattggatgtgtccagactatctccgtcatcgggccggttttcgggtatctgctg
ggctccgtctgtgccaagatatacgtggacattgggtttgtcaacatggagagcatcagc
atcactccaggagacgcgcgctgggtcggcgcctggtggctaggctacctgattgccgga
ttcattaccctgctttcagccgtgcccttctggttcctgcccaagtctttgccactgcca
gagagaagactgagcaaatactctccggagcgcaacagcttcatcaaagactcggctctg
ctggagcacaaataccaggcagacgagccggctaacttcctggaaatggccaaagacttt
ttgcccacactgaggtctctcctgggaaacccggtctactttctgtatctgtgcgtgacc
atcatccagttcaactcactgatcggcatggtcacatataaaccaaaatacatcgagcag
cattacggacagtccgcatccaaagccaacttcctcatgggagttatcaacatcccagcc
gtagccttgggaatgttttcgggcggcgtgatcatgaagaagttcaagctgagcatcatg
ggagcagccaagtttgcgttgggaacgtctctgctgggctattttctgtctctcttcttc
ttcagcatgggctgtgaaaacgccagcgtggctggaatcaccatgtcctacaacgggacg
gagagtctgtttatggcggacggctctctgcgagcgtcctgcaacgcagcctgtcattgt
cctgaaaaaaactgggacccggtgtgcggagaagacggcctcacctacgtgtccccgtgc
ctggctggatgccggacgtcccacggctcaggaatggacacggtgtttgagcagtgcagt
tgtataggagtggggaatcagacagccaccgcaggccaatgcaacaacagagaaagctgc
catcgcattttcccgtacttcctggctctgtccgtcatcacttccttcattatatcacta
ggaggaacgccaggatacatgctgctcatcagatgcatcaaacctcagctgaagtctcta
gcgttgggttttcacactctgaccacacgtactctggcagggattccagctccgatatat
ttcggggccatcatcgacaccacctgtctgaaatggggacacaagaagtgtggtggaaga
ggagcctgtcgaatctacaacaccgcggcctacagcgtatctgggcctgacgttgggttt
gcgcaccgtttccttcttcctgtgtatcctggggttgttggttttgcgacggcacgttca
gaagcaggagcgcagcacaatggtgaacggaggatcagcggcagccggagaactgcaggc
gctcagaaaagaagaaaacaacagctgtaa
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