Danio rerio (zebrafish): 562797
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Entry
562797 CDS
T01004
Symbol
thumpd2
Name
(RefSeq) U6 snRNA (guanine-N(2))-methyltransferase THUMPD2
KO
K28400
U6 snRNA (guanine-N(2))-methyltransferase THUMPD2 [EC:2.1.1.-]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
562797 (thumpd2)
Spliceosome [BR:
dre03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
562797 (thumpd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0020
Methyltransf_31
Methyltransf_25
Methyltransf_11
Ubie_methyltran
MTS
THUMP
RlmL_1st
Cons_hypoth95
Methyltransf_4
NpmA
AviRa
Methyltransf_12
Methyltransf_8
Methyltransf_ANTKMT
N6_Mtase
Methyltransf_15
PrmA
Motif
Other DBs
NCBI-GeneID:
562797
NCBI-ProteinID:
XP_691263
ZFIN:
ZDB-GENE-090428-2
Ensembl:
ENSDARG00000093070
UniProt:
A0AA70QG17
LinkDB
All DBs
Position
17:26008077..26015865
Genome browser
AA seq
446 aa
AA seq
DB search
MRRLYCTAGAGMEELLAQEVRQKLCASQVEQIPGRVFFSTNAEPQTLTQLKSAERLFLLL
HKAEPIALPNNPGKAAAVIKERVVGDPDIWKQTLLSWTAFQEELECRRDQGHKRKREEDE
EESVTEADGSTHTVSSNTHLLEKQKEVGKESHLQTLSFRVSCRCSGVIARSDNPQRLSRI
IGMAIKEQLGWKVDLREPVLEVNVYLSDDHCIVGIPLLKHPLASRSYMKHNGLRSTIAWA
MTSLCPDELNNCVILDPMCGVGAVLLEAAQEYSNAVFLGMDTDGSQLQKAAENVKASGME
GRVQLLQSSALEIPLADGMVDAVLCDVPFGRKFSCSSDMTTALPLLLREMERVLRVGGHL
VLLLSLQLSAQLKKIICTPEQEKHSKSLDTNSVHTEPSNAHKESTETHKTLLISSLQSQK
KHRVSLGSTDAFIHTYTKMQTQTHSH
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagacggttgtactgtacggcaggcgcggggatggaggagctgctggcccaggaggtg
cgacagaaactctgcgcttctcaagtggagcagattccaggcagagtttttttcagcacc
aatgctgaacctcaaaccctgactcaactcaagtctgcagagaggctgtttctcctcttg
cacaaagctgaacccattgcacttcccaacaacccaggaaaggcagctgctgttataaag
gagagagttgtgggagatccagacatttggaaacagactcttttatcctggaccgccttt
caggaagaactggagtgcagacgggatcaaggacacaagagaaagagagaggaagatgag
gaggagagtgtgactgaagctgatggatccacacacaccgtctcctccaacacacacttg
ttagagaaacaaaaggaagtgggaaaagagtctcatctgcagacactttctttcagagtg
agctgtcgctgtagtggagtcattgcccgctctgataaccctcagagactgagtcgtatc
attgggatggccattaaagaacagcttgggtggaaagtagacctgagagagcctgttctt
gaggtcaatgtgtatttaagtgatgaccattgcattgtaggcattcctcttttgaagcat
cctctggccagtcgttcttatatgaaacacaacgggttgcgttctaccatagcctgggcc
atgacctctctctgccctgacgagctcaacaattgtgtgattttagacccaatgtgtgga
gttggtgctgtgttgctggaagcagctcaggaatattctaatgctgtatttctaggcatg
gatacagacgggtctcagttacagaaagctgcagagaatgtgaaagcatctggaatggaa
ggaagagtgcagttacttcagtcttctgccttggagatccctcttgctgacgggatggtt
gatgccgtcctgtgtgatgttccctttggcaggaagttcagttgtagctctgacatgaca
actgctctgccactcttactgagagagatggagagggtacttcgtgttggtggacatctt
gttttgttactgagtttgcagctttctgctcagcttaagaagatcatttgcacacccgag
caggaaaaacactccaagtctttagacacaaacagtgttcacactgagccttcaaacgca
cacaaagaaagcacagagactcataaaaccttattaatcagctctttacaatcacagaag
aaacacagggtcagtcttggcagcacagatgcatttatacacacttacactaaaatgcaa
actcaaacacactcacactga
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