Danio rerio (zebrafish): 562838
Help
Entry
562838 CDS
T01004
Symbol
rac1b
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1b
KO
K04392
Ras-related C3 botulinum toxin substrate 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04010
MAPK signaling pathway
dre04145
Phagosome
dre04148
Efferocytosis
dre04310
Wnt signaling pathway
dre04370
VEGF signaling pathway
dre04510
Focal adhesion
dre04517
IgSF CAM signaling
dre04518
Integrin signaling
dre04520
Adherens junction
dre04530
Tight junction
dre04620
Toll-like receptor signaling pathway
dre04810
Regulation of actin cytoskeleton
dre05100
Bacterial invasion of epithelial cells
dre05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
562838 (rac1b)
04310 Wnt signaling pathway
562838 (rac1b)
04370 VEGF signaling pathway
562838 (rac1b)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
562838 (rac1b)
04518 Integrin signaling
562838 (rac1b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
562838 (rac1b)
04148 Efferocytosis
562838 (rac1b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
562838 (rac1b)
04520 Adherens junction
562838 (rac1b)
04530 Tight junction
562838 (rac1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
562838 (rac1b)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
562838 (rac1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
562838 (rac1b)
05100 Bacterial invasion of epithelial cells
562838 (rac1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
562838 (rac1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dre04147
]
562838 (rac1b)
04031 GTP-binding proteins [BR:
dre04031
]
562838 (rac1b)
Membrane trafficking [BR:
dre04131
]
Exocytosis
Small GTPases and associated proteins
Rho GTPases
562838 (rac1b)
Endocytosis
Lipid raft mediated endocytosis
Arf6-dependent endocytosis
562838 (rac1b)
Macropinocytosis
Ras GTPases
562838 (rac1b)
Others
NADPH oxidases (Nox) and associated proteins
Nox associated proteins
562838 (rac1b)
Exosome [BR:
dre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
562838 (rac1b)
Exosomal proteins of other body fluids (saliva and urine)
562838 (rac1b)
Exosomal proteins of colorectal cancer cells
562838 (rac1b)
Exosomal proteins of bladder cancer cells
562838 (rac1b)
GTP-binding proteins [BR:
dre04031
]
Small (monomeric) G-proteins
Rho Family
Rac/Cdc42 [OT]
562838 (rac1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
CagD
Motif
Other DBs
NCBI-GeneID:
562838
NCBI-ProteinID:
NP_001034907
ZFIN:
ZDB-GENE-060312-45
Ensembl:
ENSDARG00000087954
UniProt:
Q29RC5
LinkDB
All DBs
Position
3:60282034..60302600
Genome browser
AA seq
192 aa
AA seq
DB search
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCQTTPIILVGTKLDLR
DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP
PVKKRKRKCSLL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccatcaagtgtgtggtcgtcggtgacggggctgtgggtaaaacatgtctgctg
atcagctacacaaccaatgcttttcccggagaatacatccccacagtatttgataattat
tctgcgaatgtgatggtggatgggaaaccggtgaatctgggcctgtgggatacagcagga
caggaggattacgacagacttcgccctctctcgtaccctcagacggacgtgttcctcatc
tgcttctctctcgtgagtcctgcctctttcgagaacgtccgtgcaaagtggtatccagaa
gtgagacatcactgtcaaaccactcccatcatcctggtgggaaccaagcttgatctgaga
gacgacaaggacaccattgagaagctgaaggagaagaagctcactcccatcacctaccct
cagggcctggccatggccaaagagatcggggcagtgaagtatctggaatgctcggcactc
acacagcgtggcctgaagacggtgtttgatgaggccatccgggccgtcctgtgccctcca
cccgtcaagaagaggaagaggaaatgctccctgctgtag
DBGET
integrated database retrieval system
