Danio rerio (zebrafish): 562839
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Entry
562839 CDS
T01004
Symbol
rad23ab
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein b
KO
K10839
UV excision repair protein RAD23
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03420
Nucleotide excision repair
dre04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
562839 (rad23ab)
09124 Replication and repair
03420 Nucleotide excision repair
562839 (rad23ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
dre03051
]
562839 (rad23ab)
03400 DNA repair and recombination proteins [BR:
dre03400
]
562839 (rad23ab)
Proteasome [BR:
dre03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
562839 (rad23ab)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
562839 (rad23ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Crinkler
Rad60-SLD_2
Dsc3_N
CUE
UBA_2
UBA_9
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
562839
NCBI-ProteinID:
NP_001032776
ZFIN:
ZDB-GENE-051113-160
Ensembl:
ENSDARG00000058984
UniProt:
Q32PS7
A0A8M1N871
LinkDB
All DBs
Position
22:complement(4745105..4760187)
Genome browser
AA seq
404 aa
AA seq
DB search
MLTITLKTLQQQTFKVQIDEELTVKALKEKIEEEKGKDGFPAVGQKLIYAGKILNDDIPL
KEYKIDEKNFVVVMVTKPKSAASPQTPTPVPVSETPTHQPTTPVAPPNASIVPETTPDPA
PVEPAASVEPIDPPVTAPPAASEDTVETTEPVSATPAPVVEEEIQGQEEQAIAQSEASLT
DELSLLEAAASILVTGQAYENLVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLTGIPA
ESEQPPQEVVRPTPSSNPTPPAPQRAQPPPAAAGAESGGAQASANPLEFLRHQPQFQQMR
QIIQQNPSLLPALLQQLGRDNPQLLQQITQHQERFVQMLNEPEAEAPAAPQTNYIQVTPQ
EKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDDE
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgataactctgaagaccctccagcagcagacgtttaaagtgcagatagatgag
gaactgacggtaaaggctcttaaagagaagatagaggaagaaaaggggaaagatggtttt
ccagcggtcggtcaaaaactaatctatgcaggcaaaattttgaatgacgatatacctctg
aaagaatacaaaatagatgagaagaattttgttgtggtgatggttacaaagccaaaatct
gcagcgtcgccacaaactcccactcctgtaccagtgtccgaaacccccacacatcaaccc
acgactcctgttgcgcctcctaatgcctccatagtgcctgaaacgacccctgatcctgct
cctgtagaaccagctgcatcagtggagccgattgacccacccgtcacagcgccccctgct
gcatcggaggatactgtagaaacaactgaacccgttagcgctactcctgctccagtcgta
gaagaggagatccagggccaagaggagcaggccatcgcccaatcagaggccagcctcaca
gatgaattgagtcttttagaagcagctgcatcgatactagttacaggtcaagcgtatgag
aatttggtgacggaaatcatgtcgatgggttatgagagggaacaggtgatcgctgcttta
agagcaagtttcaacaacccggacagagccgtggagtacctacttacgggtattccagca
gagtcagagcagcctccacaggaagtagttcgacccacaccctcgtccaacccgactcct
ccagcaccacagagagctcagcctccacctgccgccgccggtgcagagtctggcggtgcg
caggcatctgcaaacccattggagttcctgaggcaccagccgcagtttcaacagatgcgg
cagatcatccagcagaacccatcgcttctgcctgcactgctgcagcagctcggccgagac
aacccacaacttctgcagcaaatcacgcagcatcaggagcggtttgtgcagatgttgaac
gagcctgaagctgaagctcccgctgcaccacagaccaactacatacaggtcacaccccag
gagaaagaggccatcgagaggttaaaagctctggggtttcctgaaggtctcgtcattcaa
gcgtacttcgcctgcgagaagaacgagaacctcgcggcaaactttctgcttcagcagaac
tttgacgacgaatga
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