Danio rerio (zebrafish): 562995
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Entry
562995 CDS
T01004
Symbol
depdc5
Name
(RefSeq) GATOR1 complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
562995 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
562995 (depdc5)
Membrane trafficking [BR:
dre04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
562995 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
562995
NCBI-ProteinID:
XP_021334975
ZFIN:
ZDB-GENE-091204-356
Ensembl:
ENSDARG00000078105
UniProt:
A0A8M9QKY4
LinkDB
All DBs
Position
10:complement(22013245..22064153)
Genome browser
AA seq
1614 aa
AA seq
DB search
MTVTMKANKSYKLVVHKKGFGGSDDELMMNPKVFPQVKLGDIVEIAHPNDEYSPLLLQVK
SLKEDLQKETISVDQTVAQAFKLRAYQDVIINIVDPKEVTLDLVELTFKDQYIGRGDMWR
LKKSLVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQ
MSCEMWDFDIYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTFYSAKTLEEFPE
SQRASVRQDHEGRYYEDFYRVVAQNERRDEWMSLLVTIKKLFIQYPVLVRLKGADGFPCG
HNSTSAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQR
MIDNGIGVDLVCMGEQPLHAVPLFKLHNRTVHGDSRIGDDYNLPHWINHSFYTSKSQNSC
SCFTPRIKLAGKKVHAEKAKNSKEHSLGAPKDAENSLPIQVDYDAYDSQVFRLPGPSRAQ
RSTNFSSSHINSTDSNRSSRERESVSRKSWGSADVGSSPPNRHTGPDEQRSLASDDSLGH
MSNILLIPRPAQGQYEVSSSLGYTSCTRELLEKMVESQRDSSAPGRFTVGSAESTLHVRP
GGYTPQRALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGEPIQIHHQTRQNMAELQGSEQ
RDPARTSAELLELAYHEATGSKRTASRHAGENGLYISGVPDNISGSPASSSSTGTPVNRG
SFEDYSGSLDPILLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQTLQNDYTE
GCYDLLPHTDLERRDDETPVMTAHQVFEEFICQRLMQGYQIIVQPNRKPQPAIAPPLSSS
PLYSRGLVSRRKPEEEESLYWLSMGRTFHKVCLKDKIITVTRYLPKYPYESTQIQYSYNL
CPPHADAHFMPFWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAG
GARRVADGEGHWDVYGEGAGAGRDGLAGTGDWTLLDGFIRFLEGLNRIRRRHRSDRMIRK
GATIKGLQVTGALTSYTPEPIAPPLGKKGTSALSALLELEQTQKTFEEQQLAAQHGGKPC
GPFSEAANVALTTTFVDSPRKDAAFILDFIRSPRSSYICHSQLPAEQVPANPIEGGLSDK
ISNQPGERTSAASQATGDPTPGASLETGGQSGSSGLSLSSSSTLMEILEAIKHPTTGVQL
LPEQRGLPPNCFVSAEVVHWLVSTVENVATQGIAVEIMQKMLEEGLITHASGDAMRTFVY
GFYFYRIVDKDNEKAPLTQLPPAGANVWSAAALEDFALFQRKWFEVAFVMEERRPCDLPA
FLLPWLPSRPASYASRHSSFSRSFGGRSQAAALLAATVPEQKTVTLDVDVNNRSDRTEWC
SCYYHGNFSLNAAFEIKLHWMAVTAAVLFEMVQGWHRKAASCGFLLVPVLEVPFALSSYL
YGDPLRAQLFIPLNIQCLLKEGSDNLFEGFEPETYWDRMQLFQEAILTRFGFVQDKFSAS
AFNFPSENKPQYIHVTGTVFLQLPYSKRKYSSGQRRRRNSTTSTNQSLFGSEERVGYNWA
YNTMLTKAWRTGVLGDEKLADRLLRDFTDFCANKDNRLVTFWESCVEKMNASAP
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcaccatgaaggcaaacaagtcctacaagcttgtggtgcacaagaagggcttt
ggaggcagtgatgatgagctgatgatgaaccctaaagtatttcctcaagttaaactgggg
gatattgtcgaaattgcacatccaaatgatgagtacagtcctctgttgctacaggtgaag
agtttgaaagaggacctgcagaaagaaactatcagtgtcgatcagactgtggctcaggct
ttcaagctgcgtgcctaccaagacgtcatcatcaatattgtggatccaaaggaggtgact
ttggatctggtggagctcacctttaaagatcagtatattgggcgaggagacatgtggcga
ctaaagaagagcttagtgagcacatgtgcatatgtgacacagaaagtagagtttgcagga
atcagggcccaggccagtgaattgtgggtaaaaggagaaaaggtcacttgtggctacatt
agtgaggatacacgggtggtctttcgctccacctctgcgatggtttatatattcatccag
atgagctgtgagatgtgggacttcgatatctacggtgatctttattttgagaaggctgtc
aatggtttcctttcagatctgtttgccaaatggaaagagaagaactgcagtcatgaggtg
acagtggtgctgttctctcgcaccttctattctgccaaaacactggaggagtttccagag
agccaaagagcatcagttcgacaagaccatgaaggccgctattatgaggatttctacagg
gtggtggcccagaatgaaaggcgtgatgagtggatgtctctccttgttaccattaagaag
ctctttatacagtatcctgtactggtgcggcttaaaggagcagatggatttccatgtgga
cacaactccacttctgctcaaggaaattacctggaagcaatcaacttgtctttcaatgtg
tttgataagcactacatcaaccgtaactttgaccgcactggtcaaatgtcagtggtcata
actccaggagtgggtgtttttgaagtcgaccgattgctcatgatcctcaccaaacagcgc
atgattgacaacggcattggtgttgatctggtgtgtatgggagaacagccccttcacgct
gttccactcttcaagttgcataaccgcacagtacatggagactccagaattggtgatgat
tacaacctgcctcactggatcaaccacagcttttacacatcaaagagtcaaaactcttgc
agctgttttacacctcggatcaagctggctggaaagaaggttcatgctgagaaagccaaa
aacagcaaagaacattctcttggcgctcccaaagatgctgagaacagccttcccatccag
gtggattatgatgcgtatgattctcaggtcttcaggcttcctgggccctccagagctcag
aggtccaccaactttagttcgagtcatattaacagcacagacagtaataggtcaagtcgg
gagcgggagtcagtcagcaggaagagctggggctctgcagacgtgggcagctctcctcca
aaccgccatacaggaccagatgaacagaggagcctggcgtcagatgacagtttgggccac
atgtccaacatcctgctcatcccacgtccagctcagggccaatacgaggtcagcagctct
ctgggctacaccagctgcacaagagaattgttggaaaaaatggtagaatctcaaagggac
tccagtgctccgggacgctttaccgtaggaagtgctgagtccactctacatgtgcggccg
ggtggttatacaccccagagggccctcatcaacccgttcgctccctcacgcatgcctatg
aaactcacatccaatcgccgccgctggatgcacacgtttcccgtgggtccttcaggagag
ccgattcagatccaccatcagacgcgtcagaacatggctgagctgcagggcagtgagcag
agagacccggctcgtacctctgctgagctgctggaactggcctatcatgaagccacagga
agtaagcggacagcgtcccgtcatgctggagagaatggactgtacatcagtggagttccg
gacaacatctctggaagcccagctagtagctccagcactggaacaccagtgaaccgtggt
tccttcgaggattattccggcagtctagatccgatcctcctgctgtctgcccctccgaca
gtgcctagtttctgctgcacagtcggggtggactggaagtccctcaccactcctgcctgc
ctcccccttaccaccgattactttcccgaccggcaaaccctgcagaatgactatacagag
ggatgctacgacctgctgccacacactgacctcgagagacgtgatgacgagactccagtg
atgacggcccatcaggtgtttgaagagttcatctgtcagcgactgatgcaaggctaccag
atcattgtacagcccaacaggaagccacagcctgctatagccccgcccctcagcagcagt
cccctgtattccagagggctggtgtctcgccgtaaaccagaagaagaagagagtctttac
tggctcagtatgggcagaacttttcataaagtctgtcttaaagataagatcatcacagtc
acccgctacctcccaaagtatccatatgaatcaacacagattcagtacagctacaatctg
tgccctccacatgcagatgcccacttcatgccattctgggtagagttcagccacgagcgg
ctggaggagtacaagtggaactatttagaccagtacatctgctctgccggatcagaggac
ttcagtctcattgactctctgaagttttggcggacgcgcttcttgcttctgccagcgggg
ggagccaggcgagtagcggatggtgagggtcactgggatgtttatggagagggagccggg
gcaggacgagatggcctcgctggcacaggggactggacccttttagatggattcatccgt
tttttggaaggcctgaacaggattcgacggcgtcatcggtctgaccgaatgatccgcaaa
ggagctaccattaaaggcctgcaggtgacaggagcccttacatcctacaccccagagccg
atagcgccccctcttggaaaaaagggcacctctgctctctctgcactcttggaactggag
cagacacagaagacttttgaagagcagcagcttgccgctcagcatggtgggaaaccatgt
ggacctttcagtgaagctgccaacgttgccttgacaaccacgtttgtcgatagccctcgt
aaggatgcagccttcattttggactttattcgtagtccacgttcctcctacatctgtcac
tctcagcttccagctgaacaggttccagcaaatcccattgagggtgggttgtcggacaaa
ataagcaaccaaccaggtgagagaacatctgctgcatctcaggccacaggagacccaacc
ccaggcgctagtctagagactggggggcagtcggggtccagtggactgagtctttcctca
tcttccacactaatggagatcctggaagccattaagcatcccaccactggagtgcagctt
ttgccagagcagaggggcttgcctcccaactgcttcgtcagtgctgaggttgtgcattgg
ctggtcagcactgtggagaatgttgccacgcagggcattgcagtagagattatgcagaaa
atgctggaggaaggtctgattactcatgcttctggtgatgccatgcgaacctttgtctat
ggcttctacttctaccggattgtcgataaagataacgagaaggccccgctgactcagctt
cccccagctggagcgaatgtatggtcagctgcagctttggaagacttcgctcttttccag
aggaagtggttcgaggtggcctttgttatggaggaacgtcgaccatgtgacttacctgcc
tttctgctgccttggttgcccagccggccagcctcgtatgcaagtaggcatagctccttc
agccgcagcttcggaggacgcagccaagctgctgcactgctagccgccacagttccagag
cagaaaacagtcaccttggatgtcgatgtgaacaatcgtagtgatcggacagaatggtgc
agctgctattaccatggcaacttctcccttaatgctgcctttgaaatcaagctgcactgg
atggccgtcactgcagccgtgctctttgaaatggtgcaaggctggcacaggaaggcagca
tcttgcggattcctgcttgtccctgtgttggaggtgccctttgctttgtcgtcataccta
tatggcgacccactccgtgctcagttgtttattcccctaaatatccagtgcctgctaaag
gagggctctgataacctttttgagggttttgagccagagacatactgggacagaatgcaa
ttgtttcaggaggccatactgactagatttggctttgttcaagacaagttctcagcgtca
gcttttaactttccatcagagaacaaacctcagtacatccatgtaacaggtacagtattt
cttcagctgccttactctaaaaggaagtacagtagtggacagaggcgacgccgtaactcc
accacctccaccaatcagagcctgtttggttctgaggagcgagtgggctacaactgggcc
tacaacaccatgctaaccaaagcctggaggactggtgtgttaggagatgagaaactggcc
gaccgcctgcttcgagatttcacagacttttgtgccaacaaggataatcgtctggtgacc
ttctgggaaagctgtgtggagaaaatgaacgcgagtgccccttga
DBGET
integrated database retrieval system
