Danio rerio (zebrafish): 563053
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Entry
563053 CDS
T01004
Symbol
capn2b
Name
(RefSeq) calpain 2, (m/II) large subunit b
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04141
Protein processing in endoplasmic reticulum
dre04210
Apoptosis
dre04217
Necroptosis
dre04218
Cellular senescence
dre04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
563053 (capn2b)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
563053 (capn2b)
04217 Necroptosis
563053 (capn2b)
04218 Cellular senescence
563053 (capn2b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
563053 (capn2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dre01002
]
563053 (capn2b)
Enzymes [BR:
dre01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
563053 (capn2b)
Peptidases and inhibitors [BR:
dre01002
]
Cysteine peptidases
Family C2: calpain family
563053 (capn2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
563053
NCBI-ProteinID:
NP_001018177
ZFIN:
ZDB-GENE-050522-84
Ensembl:
ENSDARG00000055592
UniProt:
Q504F5
LinkDB
All DBs
Position
22:complement(26328063..26353916)
Genome browser
AA seq
696 aa
AA seq
DB search
MAGIASTVAKKRALAAGFGTNANATKYLNQDFEALRSECRARGTLFSDPTFPAAPESLGF
KELGPNSSKTRGLVWKRPGELCQKPRFIVGGATKTDICQGALGDCWLLAAIASLTQNEDV
LARVVPNGQEFDGTYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELLFVYSAEKNEFWSAL
LEKAYAKVNGCYEALSGGSTSEGFEDFTGGIAESYEIRKAPTNLFQIIQKALEAGALLGC
SIDITSAADSEAITRQKLVKGHAYSLTGATEVNYRGRKEKLVRMRNPWGQVEWTGAWSDN
SPEWNSVAASERPDASAEDGEFWMAFSEFLTNYSRIEICTLTPDAITDDSVKHWAVTNHD
GTWRRGSTAGGCRNNPYTFWMNPQFVVKLDEENVEDKEKGCSFVVGLIQKNRRRLRKTGE
DMNTIGFAIYELPQEFHGQREVHLDKNFFLTHGQKARSETFINLREVCTRFHLPPGEYLI
VPSTFEANKDGDFCLRVFSESQSETQHCDDPVDAELPDETVSDDQVDSKFRGMFVKLAGP
DMEISPLELMTIFNKIIAKRTDIKSSTFTLDTCRVMVNLMDDSGNGKLGLGEFATLWKKV
QRYLEIFKHNDLDSSGTISTPELRMALKEAGFCLNNTLFQLMVARYAEKDMTLLFDNFVS
CLMRLEMMFRAFKRLDPHKSGFIELNFNQWLNLTMI
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaattgcgtctactgtggccaagaagagagcgctggctgcagggtttggaacc
aacgccaatgccaccaagtacctgaaccaggactttgaggcgctcaggagtgagtgcagg
gccagagggaccctgttctcagacccgactttccccgccgctcctgaatcactgggcttt
aaagaactcggacccaactcgtccaaaaccagaggattagtatggaaaaggcccggggaa
ttatgccagaaaccacgcttcatcgttggtggggccacaaaaacggatatctgtcaagga
gctttgggtgactgttggctgctggctgctattgcctccctgacacagaatgaagatgtt
ttggcaagagttgtgcccaatggacaggagtttgatggcacttatgcaggaatcttccat
ttccagttctggcagtttggcgagtgggtggatgtggtcattgacgaccggctgccggtg
aaagatggcgagctgttgtttgtttactccgctgagaaaaacgagttctggagcgccctg
ctggagaaggcctatgctaaggtgaacggctgttatgaagccctgtctggaggatccact
agcgagggttttgaggacttcactggaggcatcgctgagagctacgagatcagaaaagca
ccgaccaatttgtttcagatcatccagaaagccctggaggctggagctttgctgggctgc
tccatcgacatcactagtgctgctgattcagaagccatcactcgtcagaagctggtcaaa
ggccacgcctactcactcacaggggcaacagaggtgaactatcgtggtcgcaaggaaaag
ctggttcgtatgcgcaacccttggggacaggtggagtggaccggagcctggagcgacaat
tcacctgaatggaacagtgttgcggcatcagagcgtccagacgccagcgccgaggatggt
gaattttggatggcattctccgaattcctcaccaattactctcgtatagagatctgcact
ctgacgccggatgccatcacagatgattcagtaaaacattgggccgtgacaaatcatgac
ggcacatggaggagaggctccaccgctggaggctgcagaaacaatccatacacattttgg
atgaatccacaatttgtggtgaaactggatgaagaaaatgtcgaagataaggagaagggc
tgcagttttgtagtgggtctgattcagaagaaccgccggcgcctgaggaaaactggagag
gatatgaacactattggctttgctatttatgagctcccccaggagtttcacggtcagcgg
gaagtgcacctggataaaaacttcttcctgacgcacggacagaaagctcgctctgagact
ttcattaacctcagggaggtctgcacgcgcttccatctgcctcctggagagtacctcatc
gtaccatctaccttcgaagccaacaaggacggagacttctgcctgcgtgtcttctctgaa
agccaaagtgaaacacaacattgcgatgaccctgtggatgctgaattacctgatgagact
gtctcagatgatcaagttgattcaaagtttagggggatgtttgtaaaacttgccggacct
gacatggaaatctcgcccctggagctcatgaccatctttaacaaaatcattgcaaaacgc
actgacattaagtcgagcaccttcactttggatacgtgtcgtgtcatggtgaacctcatg
gacgacagtgggaatggaaaactggggctgggagagtttgctactctgtggaagaaagtg
cagagataccttgaaattttcaagcataatgacttggatagctcgggaaccataagcact
ccagagctgcgtatggcactgaaagaggccggtttctgtctcaataacactttatttcag
ctgatggttgcacgttatgctgagaaggacatgactctcctctttgacaacttcgtgtcc
tgcctgatgcgtcttgaaatgatgttcagggcattcaaaaggttggatcctcacaaaagt
ggcttcattgagctgaattttaatcagtggctgaaccttaccatgatataa
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