Danio rerio (zebrafish): 563108
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Entry
563108 CDS
T01004
Symbol
zc3h12ab
Name
(RefSeq) uncharacterized protein LOC563108
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
563108 (zc3h12ab)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
563108 (zc3h12ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
563108
NCBI-ProteinID:
NP_001164500
ZFIN:
ZDB-GENE-081031-82
Ensembl:
ENSDARG00000101034
UniProt:
B8JJU9
LinkDB
All DBs
Position
19:complement(4175829..4194279)
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AA seq
626 aa
AA seq
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MSAEISTIPTLQLYLDPLWPSSVGTSDIDPSTAWVSAPKSPYKPPLSSSINMDPSQPSPT
QEESSELSSEFQTQLDLFLKLGFSQTQVRAAFLKLGLHADTNKVLGELIKATGEAEDKDD
TTASTTLVSRGDGSSKVRSPQNQSVATVMNTQEELVKDEDALRPIVIDGSNVAMSHGNKE
VFSCLGIQLAVNFFLERGHLDITVFVPSWRKEQPRPDVPITDQHILRELERSKLLVFTPS
RRVAGKRVVCYDDRFIVKLAYESDGIIVSNDTYRDLQGERPEWKRFIEERLLMYSFVNDK
FMPPDDPLGRHGPTLDNFLRKTPRIPKKQPCPYGKKCTYGNKCKFHHPERTKQSRALADE
LRDKAKISSAPHKSPVPSQSPSLEETIEQKLSLDPCGSVKKSYASENVIIINASPQPTQR
KFPMKKERRHSPTSLESFPNGSQERLDSGLGSYECHTSETPHCDHRKSKPSSGGRHRYIP
PNSQPCSCCSYQSYQSQHHSSSPNPGYNQPRYHSYGGGPVYPHSNMHQYSFPHNRGPPPH
QGYWSDHYGAYPPTSHNAMQSERGHGHWSPSNHSPQWSEREQVRKKLLAIFNARLVDRAM
DMFPYLLDPQRLAAEILTLQSQDGAL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgaaattagcaccatccccacattacagttgtatttggatcccctttggcca
tcgagtgttggaacctctgacatagacccctccaccgcatgggtttcagcacctaagtcg
ccgtacaaacctcctgtgtcttccagcattaatatggacccatctcagcccagtccaaca
caagaagagtcctcagaactgagctctgagtttcagactcagctcgatctgttcctgaag
ctggggttttcccaaactcaggttcgtgccgctttcctgaaacttgggctccacgcggac
acaaacaaggttttgggtgagctaataaaggctactggggaagcagaggataaagatgat
actacagcctcaacgacgctggtttcacgcggggatggttctagtaaagtcagaagcacc
caaaaccagagtgtagcaacagtgatgaacactcaggaggagctggtgaaggacgaagac
gcactcagacccatagtcattgatggctctaatgtagccatgagccacgggaacaaggaa
gtgttttcctgtctgggaattcagctggcagtgaactttttcctggagcggggtcacctt
gacatcacagtgtttgtgccttcctggagaaaagagcagccgcgacctgatgtacccatc
acagatcaacacattctgcgagagttagagcgaagtaagctcttggtgttcacaccgtcc
agaagggtggccggaaaacgtgtggtgtgctacgacgaccgttttatcgtgaagttggcg
tacgaatccgatggcattattgtgtccaacgacacttaccgggatctgcaaggagagcgt
cccgagtggaaacgcttcatagaggagaggcttctcatgtactccttcgtcaatgacaag
tttatgcctccggatgaccctttgggaagacatggacccaccctggacaactttctcaga
aagactccgcgtatacccaaaaaacagccctgtccttatggaaagaagtgcacttacgga
aacaagtgcaagttccatcatcccgagcgaaccaaacaatcccgtgccctggccgatgag
ctcagagacaaggccaaaatttcatcggcaccacacaaatctccagttcccagtcagagt
ccgtctctggaggaaaccatagagcagaaactctccctggatccgtgtggatctgtcaaa
aaaagttacgccagtgaaaatgtcatcatcattaacgcaagcccacaaccaacccagcgc
aagtttccaatgaagaaagagcgtcggcattccccaacaagcctagaatcgttccccaat
ggatctcaggagcgtttggattctggcttgggctcctacgaatgccatacttcagaaact
ccccactgcgaccataggaaatccaaaccatccagcggtgggaggcatcgctacattcca
cccaatagccagccttgtagttgctgttcttaccaatcctaccaatcccagcaccacagc
agctcccctaacccaggttacaatcagcccaggtatcactcctatggaggaggtccagtt
tacccacactcaaacatgcaccagtattcgtttccacacaacagaggtcctccccctcat
caaggctactggtcggaccattatggtgcctatcctccgacatcccacaatgccatgcag
tcggagagaggacacggacactggtctccatccaatcacagtcctcagtggtccgaacgg
gagcaggtgaggaagaaattactggcgatttttaatgcacgtttggtggacagagccatg
gacatgttcccgtatcttctggacccacaaagacttgccgcagagattttgacacttcag
tctcaggatggagctttatga
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